Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30464
         (478 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g02835.1 68415.m00229 hypothetical protein                          28   2.8  
At1g52030.2 68414.m05870 myrosinase-binding protein, putative (F...    27   5.0  
At1g52030.1 68414.m05869 myrosinase-binding protein, putative (F...    27   5.0  
At5g39400.1 68418.m04773 pollen specific phosphatase, putative /...    27   6.6  
At3g10660.1 68416.m01282 calcium-dependent protein kinase isofor...    27   6.6  
At1g20980.1 68414.m02626 SPL1-Related2 protein (SPL1R2) strong s...    27   8.7  
At1g01130.1 68414.m00016 expressed protein ; expression supporte...    27   8.7  

>At2g02835.1 68415.m00229 hypothetical protein
          Length = 198

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 32  PKEYNPAVHGPYDPARYYGKPDTPFSQL 115
           P+EY  ++  PY P      PD+PF+ L
Sbjct: 121 PEEYEDSLISPYIPEAVLRSPDSPFALL 148


>At1g52030.2 68414.m05870 myrosinase-binding protein, putative
           (F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding
           protein-like f-AtMBP [Arabidopsis thaliana]; similar to
           myrosinase binding protein GI:1711295 from [Brassica
           napus]; contains Pfam PF01419: Jacalin-like lectin
           domain; identical to cDNA myrosinase-binding
           protein-like protein (MBP1.2)  GI:6760446
          Length = 642

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +2

Query: 26  DYPKEYNPAVHGPYDPARYYG 88
           DYP EY  AV G YD    YG
Sbjct: 67  DYPNEYITAVGGSYDTVFGYG 87


>At1g52030.1 68414.m05869 myrosinase-binding protein, putative
           (F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding
           protein-like f-AtMBP [Arabidopsis thaliana]; similar to
           myrosinase binding protein GI:1711295 from [Brassica
           napus]; contains Pfam PF01419: Jacalin-like lectin
           domain; identical to cDNA myrosinase-binding
           protein-like protein (MBP1.2)  GI:6760446
          Length = 642

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +2

Query: 26  DYPKEYNPAVHGPYDPARYYG 88
           DYP EY  AV G YD    YG
Sbjct: 67  DYPNEYITAVGGSYDTVFGYG 87


>At5g39400.1 68418.m04773 pollen specific phosphatase, putative /
           phosphatase and tensin, putative (PTEN1) identical to
           phosphatase and tensin homolog [Arabidopsis thaliana]
           GI:21535746
          Length = 412

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +2

Query: 11  NMAFGDYPKEYNPAVHGPYDPARYYGKPDT-PF 106
           +M   D+ K YN  +   YDP  +YG+ +  PF
Sbjct: 86  DMRHPDHYKVYNLCIEESYDPDNFYGRVERFPF 118


>At3g10660.1 68416.m01282 calcium-dependent protein kinase isoform 2
           (CPK2) identical to calcium-dependent protein kinase
           isoform 2 [Arabidopsis thaliana] gi|9837343|gb|AAG00535;
           contains protein kinase domain, Pfam:PF00069; contains
           EF hand domain (calcium-binding EF-hand), Pfam:PF00036,
           INTERPRO:IPR002048
          Length = 646

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -1

Query: 190 STESSGHGRRSLAAATEPRTDFVQ 119
           S+ S G+G+ S  AA+EP TD VQ
Sbjct: 34  SSSSHGNGQVSKEAASEPATDQVQ 57


>At1g20980.1 68414.m02626 SPL1-Related2 protein (SPL1R2) strong
           similarity to SPL1-Related2 protein [Arabidopsis
           thaliana] GI:6006427; contains Pfam profile PF03110: SBP
           domain
          Length = 1035

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +1

Query: 76  TLLWKT*YSIQPVEAERNRFVVRSPQQDSVCRGRSFQSSL 195
           T L K  +    V  ER+    +SP QDS  RG+  +SSL
Sbjct: 349 TNLEKRTFGFSSVGGERSSSSNQSPSQDSDSRGQDTRSSL 388


>At1g01130.1 68414.m00016 expressed protein ; expression supported
           by MPSS
          Length = 180

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 123 TKSVRGSVAAARLRLPWPELSVEPGG 200
           T S  G VAA R+  PW + S E GG
Sbjct: 56  TASASGEVAARRVLPPWMDPSYEWGG 81


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,903,686
Number of Sequences: 28952
Number of extensions: 213496
Number of successful extensions: 617
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 821630280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)