Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30461
         (867 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   0.77 
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   5.4  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    22   7.2  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    21   9.5  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    21   9.5  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   9.5  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   9.5  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   9.5  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 613  LSLDPTLDYITHFSAHNSYGNNILTFRY 530
            L LDP   Y    +AHN+ G N+  + +
Sbjct: 1552 LDLDPACWYHLRVTAHNNAGFNVAEYEF 1579


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +3

Query: 618 DLLIFTTIQYSKPVKKADYATQKDIV 695
           DLL F    YS  V  A+YA    IV
Sbjct: 438 DLLHFCRTMYSMKVDNAEYALLTAIV 463


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = -3

Query: 595 LDYITHFSAHNSYGNNILTFRYWYHS 518
           + Y+ HF        N + F Y+Y++
Sbjct: 43  IGYVKHFHPLALSNKNAIDFNYYYYA 68


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 94  YFVLVEPQLRALCRQ 138
           Y +  EPQL  LCR+
Sbjct: 73  YMLFREPQLHNLCRK 87


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 94  YFVLVEPQLRALCRQ 138
           Y +  EPQL  LCR+
Sbjct: 73  YMLFREPQLHNLCRK 87


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = +2

Query: 311 NTGIHISYQYYAHRTIPSLFVQEILINNPSNKPRALKISTPRV 439
           N G+  + + +  R +  +FV  +   + S+ P+  KI  P+V
Sbjct: 453 NMGLFDTSRNHRDRAMIKIFVDLLTSFSDSSIPKVKKIEWPQV 495


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = +2

Query: 311 NTGIHISYQYYAHRTIPSLFVQEILINNPSNKPRALKISTPRV 439
           N G+  + + +  R +  +FV  +   + S+ P+  KI  P+V
Sbjct: 453 NMGLFDTSRNHRDRAMIKIFVDLLTSFSDSSIPKVKKIEWPQV 495


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = +2

Query: 311 NTGIHISYQYYAHRTIPSLFVQEILINNPSNKPRALKISTPRV 439
           N G+  + + +  R +  +FV  +   + S+ P+  KI  P+V
Sbjct: 453 NMGLFDTSRNHRDRAMIKIFVDLLTSFSDSSIPKVKKIEWPQV 495


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,533
Number of Sequences: 336
Number of extensions: 4434
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23893023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)