Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30461
         (867 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione S-tran...    24   5.2  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   9.1  

>AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione
           S-transferase D6 protein.
          Length = 222

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 12/51 (23%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
 Frame = +2

Query: 203 SLPVYYHPLYIVDDYEIKEFTVADYKNGIVNRFQCSN---TGIHISYQYYA 346
           S+  YYHP+ +  + ++++F       G+++ F  ++    G HI+   +A
Sbjct: 114 SVTTYYHPILMGGEGKLEDFKKVQDAVGVLDSFLSASRWTAGDHITVADFA 164


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +2

Query: 383  LINNPSNKPRALKISTPRVSDWP-TAVKQTIKLHQGIDTKEY 505
            L++ P   P +   S+P    WP  AV+ T+  H G+   E+
Sbjct: 1204 LLHPPGTAPNSFHKSSPGRGSWPGPAVENTLG-HNGLLDAEH 1244


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 852,371
Number of Sequences: 2352
Number of extensions: 17698
Number of successful extensions: 20
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92613024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)