Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30461
         (867 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF045642-3|AAC02581.1|  588|Caenorhabditis elegans Hypothetical ...    53   2e-07
U61948-6|AAB03142.1|  497|Caenorhabditis elegans Hypothetical pr...    31   0.81 
M77697-10|AAA27905.1|  195|Caenorhabditis elegans Hypothetical p...    29   3.3  
U80025-1|AAD32271.1| 1064|Caenorhabditis elegans Hypothetical pr...    29   5.7  
U41279-11|AAK31420.1|  146|Caenorhabditis elegans Hypothetical p...    29   5.7  
AF077531-2|AAC64613.2|  279|Caenorhabditis elegans Hypothetical ...    29   5.7  
AF039050-10|AAC47933.2|  362|Caenorhabditis elegans Seven tm rec...    28   7.5  
AC006615-7|AAK68227.1|  450|Caenorhabditis elegans Hypothetical ...    28   9.9  

>AF045642-3|AAC02581.1|  588|Caenorhabditis elegans Hypothetical
           protein C17H12.2 protein.
          Length = 588

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 7/166 (4%)
 Frame = +2

Query: 8   QNACQQHFLQPFERALSEYDAYLRHETSATSSSLSHNYVPYVGNGLFGLALEHDSHLNIK 187
           Q+ C    L+ +E+ + E+D  + +++           V +VGNG  G+  +    L ++
Sbjct: 61  QHQCSAEKLKLWEKEIDEFDTGINNQS-----------VEFVGNGYIGV--DSFGQLRVQ 107

Query: 188 YR-RTLSLPVYYHP-LYI-VDDYEIKEFT-VADYKNGIVNRFQC-SNTG--IHISYQYYA 346
            + R L +   ++P L I +D  +  E T + D+KNGI    +C S  G    ++ Q +A
Sbjct: 108 EKNRVLDVETNFYPGLNIEIDGQQPVEVTKMTDFKNGIFKILRCFSMDGECACVTSQIWA 167

Query: 347 HRTIPSLFVQEILINNPSNKPRALKISTPRVSDWPTAVKQTIKLHQ 484
           HRT P+ FVQ I ++NP+     L +S    + W  +    + +HQ
Sbjct: 168 HRTRPNYFVQLIQVSNPTKSTVRLNLSRLSSNWWAHSKLGELTVHQ 213


>U61948-6|AAB03142.1|  497|Caenorhabditis elegans Hypothetical
           protein C46A5.1 protein.
          Length = 497

 Score = 31.5 bits (68), Expect = 0.81
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +2

Query: 419 KISTPRVSDWPTAVKQTIKLHQGIDTKEYEVVTGMIPVPESEN 547
           KIS  +++ W    ++T+K    I   E+E V+G +P   S+N
Sbjct: 196 KISDEKLTKWKLVAQETLKDDANIAVNEFEKVSGYLPPHISKN 238


>M77697-10|AAA27905.1|  195|Caenorhabditis elegans Hypothetical
           protein B0303.15 protein.
          Length = 195

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 18/38 (47%), Positives = 21/38 (55%)
 Frame = +2

Query: 158 LEHDSHLNIKYRRTLSLPVYYHPLYIVDDYEIKEFTVA 271
           LE    + IK  RTL + V YH L   D  E+KEF VA
Sbjct: 137 LEQICRMLIKTCRTLGIDVQYHDL---DPVELKEFLVA 171


>U80025-1|AAD32271.1| 1064|Caenorhabditis elegans Hypothetical
           protein F02C9.3 protein.
          Length = 1064

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = +2

Query: 20  QQHFLQPFERALSEYDAYLRHETSATSSSLSHNYVPYVGNG-LFGLALEHDSHLNIKYRR 196
           +QH    ++ AL ++    + + +  S +L HN  P + NG L   A   D    +K+  
Sbjct: 463 EQHVKSAYDSALVKHPFSAKLKNAVESLALCHNVTPVLENGELSYQAASPDEVALVKWTE 522

Query: 197 TLSLPVYYHPLY 232
           T+ + + +  L+
Sbjct: 523 TVGVKLAHRDLH 534


>U41279-11|AAK31420.1|  146|Caenorhabditis elegans Hypothetical
           protein C17C3.6 protein.
          Length = 146

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +2

Query: 506 EVVTGMIPVPESENVIAVAVVCRKMSNVIQG 598
           EV+  ++   +  N++ +  VCRK+ NV+ G
Sbjct: 42  EVIHNIVDYVDPINILVIRKVCRKLRNVLDG 72


>AF077531-2|AAC64613.2|  279|Caenorhabditis elegans Hypothetical
           protein F13C5.3 protein.
          Length = 279

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = +2

Query: 380 ILINNPSNKPRALKISTPRVSDWPTAVKQTIKLHQGIDTKEY 505
           IL+ +PS+ P+A++  +  +SD P  V  T   H+ I T +Y
Sbjct: 137 ILVTSPSHAPQAVEAISDELSDAPLKVLDT--CHKDICTYDY 176


>AF039050-10|AAC47933.2|  362|Caenorhabditis elegans Seven tm
           receptor protein 82 protein.
          Length = 362

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = +2

Query: 122 VPYVGNGLFGLALEHDSHLNIK---YRRTLSLPVYYHPLYIVDDYEIKEFTVADYKNGIV 292
           +P++GN +  L L     L+I    Y   + +PV ++P++   D     F + DY  GI+
Sbjct: 260 IPFIGNTVPMLILFFCPALHISTEPYTNYICMPVPFYPIF---DALATTFVIKDYYRGIM 316

Query: 293 NRFQCS 310
             F  S
Sbjct: 317 RIFGLS 322


>AC006615-7|AAK68227.1|  450|Caenorhabditis elegans Hypothetical
           protein C36B7.1 protein.
          Length = 450

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
 Frame = +2

Query: 218 YHPLYIVDDYEIKEFTVADYKNGIV---NRFQCSNTGIHISYQYYAHRTIPSLFVQEIL- 385
           Y  +Y V DY  K  T  +++ GI    N   C   G HISY+Y     + S +  ++  
Sbjct: 90  YPIVYTVGDYGSKNQT--NHELGIFTLPNGSYCFKEGDHISYRYSIDEVLSSGYYAQVFR 147

Query: 386 -INNPSNKPRALKISTPRVSDWPTAVKQTIKLHQ 484
             +  ++K   +K+    +S         +++HQ
Sbjct: 148 CTDKKTDKKVCIKLKNRNLSTTYEETIILLRIHQ 181


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,479,390
Number of Sequences: 27780
Number of extensions: 395171
Number of successful extensions: 1017
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)