Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30460
(555 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-28... 113 1e-25
07_03_0044 - 12758606-12758676,12758765-12758860,12759197-127592... 106 1e-23
06_03_0163 - 17380601-17380710,17380796-17380856,17381076-173811... 103 7e-23
06_01_0037 - 369498-369568,369668-369760,369889-369991,370061-37... 94 6e-20
12_01_0526 - 4171313-4171417,4171514-4171597,4171688-4171758,417... 81 8e-16
08_02_0759 - 20851828-20851932,20852190-20852285,20853231-208533... 81 8e-16
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 71 5e-13
02_03_0404 + 18648632-18648669,18649319-18649379,18649449-186494... 47 1e-05
04_03_0767 + 19389337-19389381,19390586-19390643,19390720-193907... 46 2e-05
01_03_0030 - 11787280-11787393,11787487-11787714,11788828-117889... 33 0.12
12_02_1157 + 26565040-26565081,26565189-26565262,26565343-265654... 28 4.4
10_05_0072 + 8839223-8839720 28 4.4
03_04_0006 + 16257288-16259522 28 4.4
10_05_0091 - 9085506-9085758,9085838-9085992,9086091-9086132,908... 27 7.6
>02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-282648,
282768-282923,283224-283349,283426-283560,283815-283942,
284037-284148,284233-284547,284655-284771,284871-285166,
285252-285783,287980-288082,288808-288881,288965-289062,
289340-289380,289977-290032,290170-290244,290377-290469,
290602-290850,290930-291002,291681-291766,291853-291938,
292067-292142,292280-292347,292430-292496,292570-292665,
292741-292843,293214-293309,293396-293466
Length = 2047
Score = 113 bits (271), Expect = 1e-25
Identities = 52/104 (50%), Positives = 73/104 (70%), Gaps = 2/104 (1%)
Frame = +1
Query: 1 PALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKG 180
P+LSPTM G+I W KKEGDK+S G++LCE+ETDKAT+ E EEGYLAKI+ G K
Sbjct: 1627 PSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHGDGAKE 1686
Query: 181 VPVGKLLCIIVGDQNDVAAFKDFKDDSS--PATPQKPASQDKAA 306
+ VG+++ + V ++ D+ FKD+K +S PA P +P +Q + A
Sbjct: 1687 IKVGEIIAVTVEEEGDLEKFKDYKPSTSAAPAAPSEPKAQPEPA 1730
Score = 34.7 bits (76), Expect = 0.050
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 416 GRVYASPMARRLAEIKNIRLGG-QGTGLYGSLKSGDL 523
GR+++SP+AR+LAE N+ L GTG G + D+
Sbjct: 1758 GRIFSSPLARKLAEDNNVPLSSVMGTGPDGRILKADI 1794
>07_03_0044 -
12758606-12758676,12758765-12758860,12759197-12759299,
12759379-12759474,12759537-12759603,12759682-12759749,
12759898-12759973,12760112-12760197,12760285-12760361,
12761461-12761533,12761627-12761875,12761997-12762089,
12762218-12762292,12762661-12762716,12763473-12763513,
12763907-12764001,12764085-12764158,12765052-12765145,
12765484-12765519
Length = 541
Score = 106 bits (255), Expect = 1e-23
Identities = 49/96 (51%), Positives = 69/96 (71%)
Frame = +1
Query: 1 PALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKG 180
P+LSPTM G+I W KKEGDK+S G++LCE+ETDKAT+ E EEGYLAKI+ G+K
Sbjct: 124 PSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHGDGSKE 183
Query: 181 VPVGKLLCIIVGDQNDVAAFKDFKDDSSPATPQKPA 288
+ VG+++ + V ++ D+ FKD+K S+ A P P+
Sbjct: 184 IKVGEIIAVTVEEEGDIKKFKDYK-PSTLAAPVAPS 218
Score = 32.7 bits (71), Expect = 0.20
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +2
Query: 419 RVYASPMARRLAEIKNIRLGG-QGTGLYGSLKSGDL 523
R+++SP+AR+LAE N+ L +GTG G + D+
Sbjct: 256 RIFSSPLARKLAEDNNVPLSSVKGTGPDGRILKADI 291
>06_03_0163 -
17380601-17380710,17380796-17380856,17381076-17381150,
17381538-17381600,17381679-17381755,17382432-17382515,
17382610-17382654,17382729-17382789,17383658-17384053,
17384220-17384289,17387010-17387083,17387202-17387246,
17387342-17387391,17387846-17387947,17388587-17388620,
17388681-17388758,17388915-17388965,17389082-17389085,
17389182-17389256,17389530-17389624
Length = 549
Score = 103 bits (248), Expect = 7e-23
Identities = 51/97 (52%), Positives = 66/97 (68%)
Frame = +1
Query: 1 PALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKG 180
PALSPTM G+I W K+EG+K+ GD++CEIETDKAT+ FE+ EEGYLAKIL P G+K
Sbjct: 157 PALSPTMNQGNIAKWRKQEGEKIEVGDVICEIETDKATLEFESLEEGYLAKILAPEGSKD 216
Query: 181 VPVGKLLCIIVGDQNDVAAFKDFKDDSSPATPQKPAS 291
V VG+ + + V D D+ K+ D+S QK S
Sbjct: 217 VQVGQPIAVTVEDLEDI---KNIPADASFGGEQKEQS 250
>06_01_0037 -
369498-369568,369668-369760,369889-369991,370061-370156,
370227-370293,370379-370446,370606-370681,370890-370975,
371065-371150,371337-371409,371490-371735,371845-371937,
372045-372119,372496-372540,372631-372708,372805-372921,
373865-373894
Length = 500
Score = 94.3 bits (224), Expect = 6e-20
Identities = 46/93 (49%), Positives = 63/93 (67%), Gaps = 4/93 (4%)
Frame = +1
Query: 28 GSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGKLLCI 207
G+I W KKEGDK+S G++LCE+ETDKAT+ E EEGYLAKI+ G K + VG+++ +
Sbjct: 91 GNIARWVKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHGDGAKEIKVGEIIAV 150
Query: 208 IVGDQNDVAAFKDFKDDSS--PATP--QKPASQ 294
V ++ D+ FKD+K SS A P KP S+
Sbjct: 151 TVEEEEDIGKFKDYKAPSSAESAAPAESKPQSE 183
Score = 31.1 bits (67), Expect = 0.62
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 419 RVYASPMARRLAEIKNIRLGG-QGTGLYGSLKSGDL 523
R ++SP+AR+LAE N+ L +GTG G + D+
Sbjct: 213 RTFSSPIARKLAEDNNVPLSSIKGTGPDGRILKADI 248
>12_01_0526 -
4171313-4171417,4171514-4171597,4171688-4171758,
4171814-4171891,4174482-4174569,4174659-4174850,
4174939-4175802
Length = 493
Score = 80.6 bits (190), Expect = 8e-16
Identities = 40/102 (39%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Frame = +1
Query: 1 PALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKG 180
PALS TM G IVSW EGD+L++GD + +E+DKA M ET +G+LA +L+PAG +
Sbjct: 55 PALSSTMTEGKIVSWTASEGDRLAKGDPVVVVESDKADMDVETFHDGFLAAVLVPAG-ES 113
Query: 181 VPVGKLLCIIVGDQNDVAAFKD---FKDDSSPATPQKPASQD 297
PVG + ++ ++++ A + SS ++P P Q+
Sbjct: 114 APVGSAIALLAESEDEIPAAQSKAASLSSSSSSSPPPPPPQE 155
>08_02_0759 -
20851828-20851932,20852190-20852285,20853231-20853314,
20853411-20853481,20853568-20853655,20853745-20853936,
20854044-20854931
Length = 507
Score = 80.6 bits (190), Expect = 8e-16
Identities = 42/103 (40%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Frame = +1
Query: 1 PALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKG 180
PALS TM G IVSW EGD++++GD + +E+DKA M ET +G +A +L+PAG +
Sbjct: 52 PALSSTMTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVLVPAG-ES 110
Query: 181 VPVGKLLCIIVGDQNDVAAFKDFKDDSSPATPQK-PASQDKAA 306
PVG + ++ ++D+ A + S A PQ+ P D AA
Sbjct: 111 APVGAPIALLAESEDDLQAALAKAQELSKAHPQQAPPPSDAAA 153
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 71.3 bits (167), Expect = 5e-13
Identities = 34/78 (43%), Positives = 51/78 (65%)
Frame = +1
Query: 1 PALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKG 180
PALS TM G IVSW EGD++++GD + +E+DKA M ET +G +A +L+PAG +
Sbjct: 47 PALSSTMTEGRIVSWTAAEGDRVAKGDPVVVVESDKADMDVETFYDGIVAVVLVPAG-ES 105
Query: 181 VPVGKLLCIIVGDQNDVA 234
PVG + ++ + +VA
Sbjct: 106 APVGAPIALLAESEEEVA 123
>02_03_0404 +
18648632-18648669,18649319-18649379,18649449-18649476,
18649787-18649861,18649929-18649984,18650085-18650129,
18650224-18650475,18650586-18650680,18651114-18651204,
18651356-18651466,18651556-18651750,18651827-18652018
Length = 412
Score = 46.8 bits (106), Expect = 1e-05
Identities = 27/97 (27%), Positives = 45/97 (46%)
Frame = +1
Query: 1 PALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKG 180
P + ++ G++ ++ KK GD++ + + +IETDK TM +PE G + K + G
Sbjct: 51 PFMGESITDGTLATFLKKPGDRVEADEPIAQIETDKVTMDVASPEAGIIEKFVASEGGIV 110
Query: 181 VPVGKLLCIIVGDQNDVAAFKDFKDDSSPATPQKPAS 291
P G + II +D+S KP S
Sbjct: 111 TP-GVKVAIISKSAAQSKTHTQSSEDTSQKHSTKPPS 146
>04_03_0767 +
19389337-19389381,19390586-19390643,19390720-19390759,
19390859-19390926,19391007-19391081,19391161-19391216,
19391317-19391361,19391450-19391701,19391787-19391881,
19392395-19392485,19392578-19392688,19392788-19392982,
19393071-19393262
Length = 440
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +1
Query: 1 PALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKG 180
P + ++ G++ ++ KK GD++ + + +IETDK T+ +PE G + K + G
Sbjct: 79 PFMGESVTDGTLANFLKKPGDRVEADEPIAQIETDKVTIDVASPEAGVIEKFIASEGDTV 138
Query: 181 VPVGKLLCIIVGDQNDVAAFKDFKDDSSP-ATPQK 282
P G + II +DS+P TP K
Sbjct: 139 TP-GTKVAIISKSAAPAETHVAPSEDSTPKETPPK 172
>01_03_0030 -
11787280-11787393,11787487-11787714,11788828-11788916,
11789516-11789763,11789858-11790146,11790295-11790454,
11791228-11791404
Length = 434
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +1
Query: 34 IVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKI 156
++ W EGD++ E LCE+++DKAT+ + +G + +I
Sbjct: 52 LLRWFVTEGDQVDEFQRLCEVQSDKATIEITSRFKGKVHQI 92
>12_02_1157 +
26565040-26565081,26565189-26565262,26565343-26565460,
26565547-26565617,26565704-26565869,26565946-26566145,
26566669-26566880,26567404-26567522,26567952-26568053,
26568144-26568253,26568340-26568427,26568574-26568606,
26568635-26568834,26568916-26569120
Length = 579
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 46 EKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGK 195
+++ DK + L D+A+ GF PE+ ++K + T+ PV K
Sbjct: 19 KRRASDKPANDQSLHSAAFDRASNGFRNPEQSKISKYISTRVTEVFPVKK 68
>10_05_0072 + 8839223-8839720
Length = 165
Score = 28.3 bits (60), Expect = 4.4
Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Frame = +1
Query: 58 GDKLSEGDLLCE----IETDKATMGFETPE-EGYLAKILIPAGTKGVPVGKLLCIIVGDQ 222
GD ++ G ++ E + K+ G + E G A +L A T GKL VG
Sbjct: 10 GDLMASGKVVAEATMSVFQQKSVEGVDKKEVAGAAADLLHSAST----YGKLDDKPVGQY 65
Query: 223 NDVAA--FKDFKDDSSPATPQKPASQDKAA 306
D A KDF S A P PA+ D AA
Sbjct: 66 IDKAEGYLKDFSSGSGGAAPPPPAAGDAAA 95
>03_04_0006 + 16257288-16259522
Length = 744
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 1 PALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAG 171
PA+SP+ + ++ SW+ K G L +G++ ++ TD M P G ++ AG
Sbjct: 193 PAVSPSGKRVAVASWQGKPG--LWDGEIE-DLRTDIYVMNVHKPPLGRTGPVVKNAG 246
>10_05_0091 -
9085506-9085758,9085838-9085992,9086091-9086132,
9086379-9086921,9087003-9087287,9087332-9087463,
9087542-9087729,9088186-9088240
Length = 550
Score = 27.5 bits (58), Expect = 7.6
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 25 SGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPE-EGYLAKILIPAGTKGVPVGKLL 201
S +V +K+E K G+L E + KA PE E + +K+L+ + G VG L
Sbjct: 368 SPPLVKGQKRERGKGKVGELAPEPKRGKAATSMPDPEVEHWSSKMLLLSRRLGNQVGFLD 427
Query: 202 CIIVGDQNDVAAFKDFKD 255
+V + N +F + D
Sbjct: 428 PSMVNEVNLRQSFTEVVD 445
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,981,440
Number of Sequences: 37544
Number of extensions: 234829
Number of successful extensions: 663
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1257681096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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