Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30459
(728 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79683-1|CAA56130.1| 1798|Homo sapiens beta2/S laminin chain pro... 32 2.4
BC130617-1|AAI30618.1| 630|Homo sapiens CHAT protein protein. 31 4.2
BC130615-1|AAI30616.1| 630|Homo sapiens CHAT protein protein. 31 4.2
AF305909-1|AAK08955.1| 630|Homo sapiens choline acetyltransfera... 31 4.2
AF305908-1|AAK08954.1| 666|Homo sapiens choline acetyltransfera... 31 4.2
AF305907-1|AAK08953.1| 748|Homo sapiens choline acetyltransfera... 31 4.2
AF305906-3|AAK08952.1| 630|Homo sapiens choline acetyltransfera... 31 4.2
AF305906-2|AAK08951.1| 666|Homo sapiens choline acetyltransfera... 31 4.2
AF305906-1|AAK08950.1| 748|Homo sapiens choline acetyltransfera... 31 4.2
U12820-1|AAB60645.1| 148|Homo sapiens p16-INK4 protein. 30 7.4
S69824-1|AAD14050.1| 106|Homo sapiens CDK4I protein. 30 7.4
S69804-1|AAD14048.1| 102|Homo sapiens multiple tumor suppressor... 30 7.4
L27211-1|AAA92554.1| 156|Homo sapiens p16-INK4 protein. 30 7.4
EU038281-1|ABS32187.1| 102|Homo sapiens cyclin-dependent kinase... 30 7.4
DQ318021-1|ABC47036.1| 167|Homo sapiens cyclin-dependent kinase... 30 7.4
BC021998-1|AAH21998.2| 105|Homo sapiens CDKN2A protein protein. 30 7.4
BC015960-1|AAH15960.2| 105|Homo sapiens CDKN2A protein protein. 30 7.4
AL449423-2|CAH70600.1| 156|Homo sapiens cyclin-dependent kinase... 30 7.4
AF527803-2|AAR05391.1| 156|Homo sapiens cyclin-dependent kinase... 30 7.4
AB060808-1|BAB91133.1| 156|Homo sapiens p16/CDKN2A protein. 30 7.4
Z68155-1|CAA92279.1| 1798|Homo sapiens laminin beta 2 chain prot... 30 9.8
S77512-1|AAB34682.2| 1798|Homo sapiens laminin beta 2 chain prot... 30 9.8
S45018-1|AAB23557.2| 559|Homo sapiens choline acetyltransferase... 30 9.8
M76559-1|AAA51903.1| 1091|Homo sapiens calcium channel alpha-2b ... 30 9.8
BC117470-1|AAI17471.1| 1091|Homo sapiens calcium channel, voltag... 30 9.8
BC117468-1|AAI17469.1| 1091|Homo sapiens calcium channel, voltag... 30 9.8
AF083854-1|AAF03259.1| 1110|Homo sapiens dihydropyridine recepto... 30 9.8
AC006145-1|AAD20938.1| 745|Homo sapiens WUGSC:H_DJ0560O14.1 pro... 30 9.8
>X79683-1|CAA56130.1| 1798|Homo sapiens beta2/S laminin chain
protein.
Length = 1798
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 155 KCHLVPKGHFTPLTDHGVESTENKRGTVTD 66
+C V G+F P DH + EN RG V D
Sbjct: 551 RCEQVQPGYFRPFLDHLIWEAENTRGQVLD 580
>BC130617-1|AAI30618.1| 630|Homo sapiens CHAT protein protein.
Length = 630
Score = 31.1 bits (67), Expect = 4.2
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 219 THIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKAMR 383
T+ D+L ++ C + + AP V D H L L Y K+ + R++DK+++
Sbjct: 255 TNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGANRWYDKSLQ 309
>BC130615-1|AAI30616.1| 630|Homo sapiens CHAT protein protein.
Length = 630
Score = 31.1 bits (67), Expect = 4.2
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 219 THIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKAMR 383
T+ D+L ++ C + + AP V D H L L Y K+ + R++DK+++
Sbjct: 255 TNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGANRWYDKSLQ 309
>AF305909-1|AAK08955.1| 630|Homo sapiens choline acetyltransferase
isoform R protein.
Length = 630
Score = 31.1 bits (67), Expect = 4.2
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 219 THIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKAMR 383
T+ D+L ++ C + + AP V D H L L Y K+ + R++DK+++
Sbjct: 255 TNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGANRWYDKSLQ 309
>AF305908-1|AAK08954.1| 666|Homo sapiens choline acetyltransferase
isoform S protein.
Length = 666
Score = 31.1 bits (67), Expect = 4.2
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 219 THIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKAMR 383
T+ D+L ++ C + + AP V D H L L Y K+ + R++DK+++
Sbjct: 291 TNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGANRWYDKSLQ 345
>AF305907-1|AAK08953.1| 748|Homo sapiens choline acetyltransferase
isoform M protein.
Length = 748
Score = 31.1 bits (67), Expect = 4.2
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 219 THIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKAMR 383
T+ D+L ++ C + + AP V D H L L Y K+ + R++DK+++
Sbjct: 373 TNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGANRWYDKSLQ 427
>AF305906-3|AAK08952.1| 630|Homo sapiens choline acetyltransferase
isoform R protein.
Length = 630
Score = 31.1 bits (67), Expect = 4.2
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 219 THIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKAMR 383
T+ D+L ++ C + + AP V D H L L Y K+ + R++DK+++
Sbjct: 255 TNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGANRWYDKSLQ 309
>AF305906-2|AAK08951.1| 666|Homo sapiens choline acetyltransferase
isoform S protein.
Length = 666
Score = 31.1 bits (67), Expect = 4.2
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 219 THIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKAMR 383
T+ D+L ++ C + + AP V D H L L Y K+ + R++DK+++
Sbjct: 291 TNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGANRWYDKSLQ 345
>AF305906-1|AAK08950.1| 748|Homo sapiens choline acetyltransferase
isoform M protein.
Length = 748
Score = 31.1 bits (67), Expect = 4.2
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 219 THIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKAMR 383
T+ D+L ++ C + + AP V D H L L Y K+ + R++DK+++
Sbjct: 373 TNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGANRWYDKSLQ 427
>U12820-1|AAB60645.1| 148|Homo sapiens p16-INK4 protein.
Length = 148
Score = 30.3 bits (65), Expect = 7.4
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +3
Query: 165 CIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYM 344
C P T V A +DTL L RL V W VDL ++LG + +Y+
Sbjct: 64 CADPA-TLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 122
Query: 345 KSAS 356
++A+
Sbjct: 123 RAAA 126
>S69824-1|AAD14050.1| 106|Homo sapiens CDK4I protein.
Length = 106
Score = 30.3 bits (65), Expect = 7.4
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +3
Query: 165 CIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYM 344
C P T V A +DTL L RL V W VDL ++LG + +Y+
Sbjct: 22 CADPA-TLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 80
Query: 345 KSAS 356
++A+
Sbjct: 81 RAAA 84
>S69804-1|AAD14048.1| 102|Homo sapiens multiple tumor suppressor
1/cyclin-dependent kinase 4 inhibitor p16 protein.
Length = 102
Score = 30.3 bits (65), Expect = 7.4
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +3
Query: 165 CIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYM 344
C P T V A +DTL L RL V W VDL ++LG + +Y+
Sbjct: 22 CADPA-TLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 80
Query: 345 KSAS 356
++A+
Sbjct: 81 RAAA 84
>L27211-1|AAA92554.1| 156|Homo sapiens p16-INK4 protein.
Length = 156
Score = 30.3 bits (65), Expect = 7.4
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +3
Query: 165 CIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYM 344
C P T V A +DTL L RL V W VDL ++LG + +Y+
Sbjct: 72 CADPA-TLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 130
Query: 345 KSAS 356
++A+
Sbjct: 131 RAAA 134
>EU038281-1|ABS32187.1| 102|Homo sapiens cyclin-dependent kinase
inhibitor 2A protein.
Length = 102
Score = 30.3 bits (65), Expect = 7.4
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +3
Query: 165 CIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYM 344
C P T V A +DTL L RL V W VDL ++LG + +Y+
Sbjct: 22 CADPA-TLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 80
Query: 345 KSAS 356
++A+
Sbjct: 81 RAAA 84
>DQ318021-1|ABC47036.1| 167|Homo sapiens cyclin-dependent kinase
inhibitor protein.
Length = 167
Score = 30.3 bits (65), Expect = 7.4
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +3
Query: 165 CIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYM 344
C P T V A +DTL L RL V W VDL ++LG + +Y+
Sbjct: 72 CADPA-TLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 130
Query: 345 KSAS 356
++A+
Sbjct: 131 RAAA 134
>BC021998-1|AAH21998.2| 105|Homo sapiens CDKN2A protein protein.
Length = 105
Score = 30.3 bits (65), Expect = 7.4
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +3
Query: 165 CIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYM 344
C P T V A +DTL L RL V W VDL ++LG + +Y+
Sbjct: 21 CADPA-TLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 79
Query: 345 KSAS 356
++A+
Sbjct: 80 RAAA 83
>BC015960-1|AAH15960.2| 105|Homo sapiens CDKN2A protein protein.
Length = 105
Score = 30.3 bits (65), Expect = 7.4
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +3
Query: 165 CIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYM 344
C P T V A +DTL L RL V W VDL ++LG + +Y+
Sbjct: 21 CADPA-TLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 79
Query: 345 KSAS 356
++A+
Sbjct: 80 RAAA 83
>AL449423-2|CAH70600.1| 156|Homo sapiens cyclin-dependent kinase
inhibitor 2A (melanoma, p16, inhibits CDK4) protein.
Length = 156
Score = 30.3 bits (65), Expect = 7.4
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +3
Query: 165 CIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYM 344
C P T V A +DTL L RL V W VDL ++LG + +Y+
Sbjct: 72 CADPA-TLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 130
Query: 345 KSAS 356
++A+
Sbjct: 131 RAAA 134
>AF527803-2|AAR05391.1| 156|Homo sapiens cyclin-dependent kinase
inhibitor 2A, p16 protein.
Length = 156
Score = 30.3 bits (65), Expect = 7.4
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +3
Query: 165 CIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYM 344
C P T V A +DTL L RL V W VDL ++LG + +Y+
Sbjct: 72 CADPA-TLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 130
Query: 345 KSAS 356
++A+
Sbjct: 131 RAAA 134
>AB060808-1|BAB91133.1| 156|Homo sapiens p16/CDKN2A protein.
Length = 156
Score = 30.3 bits (65), Expect = 7.4
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +3
Query: 165 CIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYM 344
C P T V A +DTL L RL V W VDL ++LG + +Y+
Sbjct: 72 CADPA-TLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 130
Query: 345 KSAS 356
++A+
Sbjct: 131 RAAA 134
>Z68155-1|CAA92279.1| 1798|Homo sapiens laminin beta 2 chain
protein.
Length = 1798
Score = 29.9 bits (64), Expect = 9.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 155 KCHLVPKGHFTPLTDHGVESTENKRGTVTD 66
+C V G+F P DH + E+ RG V D
Sbjct: 551 RCEQVQPGYFRPFLDHLIWEAEDTRGQVLD 580
>S77512-1|AAB34682.2| 1798|Homo sapiens laminin beta 2 chain
protein.
Length = 1798
Score = 29.9 bits (64), Expect = 9.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 155 KCHLVPKGHFTPLTDHGVESTENKRGTVTD 66
+C V G+F P DH + E+ RG V D
Sbjct: 551 RCEQVQPGYFRPFLDHLIWEAEDTRGQVLD 580
>S45018-1|AAB23557.2| 559|Homo sapiens choline acetyltransferase
protein.
Length = 559
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +3
Query: 219 THIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKAMR 383
T+ D+L ++ C + + AP + D H L L Y K+ + R++DK+++
Sbjct: 263 TNRDSLDMIERCICLVCLDAPGGLELSDTHRALQLLHGGGYSKNGANRWYDKSLQ 317
>M76559-1|AAA51903.1| 1091|Homo sapiens calcium channel alpha-2b
subunit protein.
Length = 1091
Score = 29.9 bits (64), Expect = 9.8
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 288 VRNVDLHDDLGLESIRKYMKSASERYFDKAMRHDNRLIVAAADYS 422
+RN + + G ++ R +KS ERY DK R V DYS
Sbjct: 555 IRNKMIDGESGEKTFRTLVKSQDERYIDKGNRTYTWTPVNGTDYS 599
>BC117470-1|AAI17471.1| 1091|Homo sapiens calcium channel,
voltage-dependent, alpha 2/delta subunit 1 protein.
Length = 1091
Score = 29.9 bits (64), Expect = 9.8
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 288 VRNVDLHDDLGLESIRKYMKSASERYFDKAMRHDNRLIVAAADYS 422
+RN + + G ++ R +KS ERY DK R V DYS
Sbjct: 555 IRNKMIDGESGEKTFRTLVKSQDERYIDKGNRTYTWTPVNGTDYS 599
>BC117468-1|AAI17469.1| 1091|Homo sapiens calcium channel,
voltage-dependent, alpha 2/delta subunit 1 protein.
Length = 1091
Score = 29.9 bits (64), Expect = 9.8
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 288 VRNVDLHDDLGLESIRKYMKSASERYFDKAMRHDNRLIVAAADYS 422
+RN + + G ++ R +KS ERY DK R V DYS
Sbjct: 555 IRNKMIDGESGEKTFRTLVKSQDERYIDKGNRTYTWTPVNGTDYS 599
>AF083854-1|AAF03259.1| 1110|Homo sapiens dihydropyridine receptor
alpha 2 subunit protein.
Length = 1110
Score = 29.9 bits (64), Expect = 9.8
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 288 VRNVDLHDDLGLESIRKYMKSASERYFDKAMRHDNRLIVAAADYS 422
+RN + + G ++ R +KS ERY DK R V DYS
Sbjct: 574 IRNKMIDGESGEKTFRTLVKSQDERYIDKGNRTYTWTPVNGTDYS 618
>AC006145-1|AAD20938.1| 745|Homo sapiens WUGSC:H_DJ0560O14.1
protein.
Length = 745
Score = 29.9 bits (64), Expect = 9.8
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 288 VRNVDLHDDLGLESIRKYMKSASERYFDKAMRHDNRLIVAAADYS 422
+RN + + G ++ R +KS ERY DK R V DYS
Sbjct: 209 IRNKMIDGESGEKTFRTLVKSQDERYIDKGNRTYTWTPVNGTDYS 253
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,740,044
Number of Sequences: 237096
Number of extensions: 1985568
Number of successful extensions: 4902
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 4735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4902
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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