Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30459
         (728 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical pr...    40   0.001
AF043700-1|AAB97571.2|  328|Caenorhabditis elegans Hypothetical ...    39   0.004
AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical ...    39   0.004
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ...    32   0.37 
Z69302-8|CAA93261.3|  420|Caenorhabditis elegans Hypothetical pr...    31   0.84 
AF039044-12|AAG24130.2|  405|Caenorhabditis elegans Hypothetical...    29   4.5  
Z78539-5|CAB01733.2| 1272|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z69885-2|CAC35825.1|  469|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z69885-1|CAC35824.1|  467|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical
           protein F31A9.6 protein.
          Length = 358

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 24/83 (28%), Positives = 42/83 (50%)
 Frame = +3

Query: 15  LGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYAS 194
           LG  +   + F  H +   + A F L  ++    K S  + +  + LYKT IRP + Y +
Sbjct: 180 LGFLISEKLDFSDHWRKCINLAKFQLANMFN---KYSTSNKKLMILLYKTFIRPRLEYGT 236

Query: 195 VVFAHAARTHIDTLQSLQSRFCR 263
           VV +   ++   T++S+Q+ F R
Sbjct: 237 VVSSPTKKSDEKTIESVQNAFTR 259


>AF043700-1|AAB97571.2|  328|Caenorhabditis elegans Hypothetical
           protein K09H9.4 protein.
          Length = 328

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 23/83 (27%), Positives = 40/83 (48%)
 Frame = +3

Query: 15  LGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYAS 194
           LG  +   + F  H K   + A F L  ++      +K  +   + LYKT IRP + Y +
Sbjct: 150 LGFLISEKLDFSEHWKKSINLAKFQLANIFNQYSTSNKKLM---ILLYKTFIRPRLEYGT 206

Query: 195 VVFAHAARTHIDTLQSLQSRFCR 263
           VV +   ++    ++S+Q+ F R
Sbjct: 207 VVSSPTKKSDEKAIESVQNAFTR 229


>AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical
           protein C44B12.7 protein.
          Length = 389

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 21/74 (28%), Positives = 37/74 (50%)
 Frame = +3

Query: 15  LGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYAS 194
           LG+  D+ +TF+PHIK +    +  L R   ++     +       L+KT I P++ Y S
Sbjct: 198 LGILTDSKLTFKPHIKKI---VSLALLRCKQLLKSFKSLCPEFYCNLFKTYILPLIEYGS 254

Query: 195 VVFAHAARTHIDTL 236
            V++    + + TL
Sbjct: 255 AVYSPKPSSSLSTL 268


>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
            protein F21E9.1 protein.
          Length = 1170

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = +3

Query: 6    VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMT 185
            V+ LG+  D  + F  HI  V   +   + R   ++   S  S +    LYKT + P+M 
Sbjct: 976  VRDLGLITDCKLKFEHHIVKV---SCLAMLRSKQILKAFSSNSPKFYAHLYKTYVAPIMN 1032

Query: 186  YASVVFA 206
            Y S V+A
Sbjct: 1033 YCSEVYA 1039


>Z69302-8|CAA93261.3|  420|Caenorhabditis elegans Hypothetical
           protein F40F8.5 protein.
          Length = 420

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +3

Query: 423 PNPDHAGASHRRRPRHVLTDPSD 491
           PN DH G +H RR R+   DPSD
Sbjct: 242 PNVDHIGHNHHRRKRNHDDDPSD 264



 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +3

Query: 423 PNPDHAGASHRRRPRHVLTDPSD 491
           PN DH G +HRR+  H   DPSD
Sbjct: 198 PNVDHTGHNHRRKRNHD-DDPSD 219



 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = +3

Query: 423 PNPDHAGASHRRRPRHVLTDPSD 491
           PN DH G +HRRR R    DPSD
Sbjct: 287 PNVDHTGHNHRRR-RDQDDDPSD 308


>AF039044-12|AAG24130.2|  405|Caenorhabditis elegans Hypothetical
           protein F48G7.11 protein.
          Length = 405

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = +3

Query: 75  RAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSR 254
           RA     +   M+C+R   SL++++   K C R  M Y + +  +  +T  D + S  SR
Sbjct: 37  RAVMRSAKSQDMVCERESCSLKDRIQCCKIC-RLKMCYDAGMDPNKFQTGRDLISS-SSR 94

Query: 255 FCRL-AVGAPWFVRN 296
              L +VG+P  + N
Sbjct: 95  SSNLSSVGSPQSLAN 109


>Z78539-5|CAB01733.2| 1272|Caenorhabditis elegans Hypothetical
           protein C31E10.8 protein.
          Length = 1272

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 20/70 (28%), Positives = 32/70 (45%)
 Frame = +3

Query: 315 LGLESIRKYMKSASERYFDKAMRHDNRLIVAAADYSPNPDHAGASHRRRPRHVLTDPSDP 494
           +G E    ++ + +ERYFDK    D+ L  A AD           H +  +H+ +   D 
Sbjct: 484 VGPEDAFWFLIAVTERYFDKTY-FDSNLTGAQADQEVLKGLLEVQHPKIMKHLKSLDIDV 542

Query: 495 ITFALDAFSS 524
            +F L+ F S
Sbjct: 543 ASFTLNWFIS 552


>Z69885-2|CAC35825.1|  469|Caenorhabditis elegans Hypothetical
           protein T04C10.2b protein.
          Length = 469

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
 Frame = +3

Query: 291 RNVDLHDDLGLESIRKYMKSASERYFDKAMRHDN-RLIVAAADYSPN-PDHAGASHRRRP 464
           ++V+ + D GL    K  +  S    D+ ++++  R I+    +  N P   GA  RR  
Sbjct: 110 QHVEDNRDQGLNIREKAKQITSLLSDDERLKNERTRFILTRNKFKQNNPGPVGAESRRSN 169

Query: 465 RHVLTDPS-DP 494
           RH +TD S DP
Sbjct: 170 RHHVTDASLDP 180


>Z69885-1|CAC35824.1|  467|Caenorhabditis elegans Hypothetical
           protein T04C10.2a protein.
          Length = 467

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
 Frame = +3

Query: 291 RNVDLHDDLGLESIRKYMKSASERYFDKAMRHDN-RLIVAAADYSPN-PDHAGASHRRRP 464
           ++V+ + D GL    K  +  S    D+ ++++  R I+    +  N P   GA  RR  
Sbjct: 110 QHVEDNRDQGLNIREKAKQITSLLSDDERLKNERTRFILTRNKFKQNNPGPVGAESRRSN 169

Query: 465 RHVLTDPS-DP 494
           RH +TD S DP
Sbjct: 170 RHHVTDASLDP 180


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,418,360
Number of Sequences: 27780
Number of extensions: 300383
Number of successful extensions: 790
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)