Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30458
         (782 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    25   0.52 
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    25   0.90 
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   6.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   8.4  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   8.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.4  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   8.4  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -3

Query: 210 LEYRLLSFSSLQWVSLTSNLQQACLRQLDRLGGKNIL 100
           LE   LSF  L++  L  NL    L Q+  L   N+L
Sbjct: 433 LEINGLSFQGLEYTLLHLNLDNVSLSQVPALSTPNLL 469


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 520 PKKDSLGLAWMSPLLTWVPANEKCLGSP 603
           P+K ++G+A+     T V A++  LGSP
Sbjct: 247 PQKLAIGIAFYGHAFTLVDASQHDLGSP 274


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 53  AQRYSYKCESEVLPHGRIFFPP 118
           A+R +Y CE  +  HG+  + P
Sbjct: 59  AKRAAYDCEGVIRHHGQWNYSP 80


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 194 SSRYSKTYGTMRSH 235
           + RY +T GTM SH
Sbjct: 232 TGRYDETRGTMLSH 245


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 13/62 (20%), Positives = 24/62 (38%)
 Frame = +3

Query: 339 IRFSTDVTRDEVKALSALMTFKCACVDVPFGGAKAGIKINPKEYSEHELEKITRRFTLEL 518
           + F+   +R  + +     TFK      P  G   G  ++ +  +   LEK +    +  
Sbjct: 123 VHFAESQSRRILASAGINKTFKSTLTGTPVDGWLFGDNLSERMKTTRALEKTSEELKIPK 182

Query: 519 AK 524
           AK
Sbjct: 183 AK 184


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 171  PIEEKKKKVAGILK 212
            PIE+ KKKV+  LK
Sbjct: 1206 PIEDDKKKVSAELK 1219


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 171  PIEEKKKKVAGILK 212
            PIE+ KKKV+  LK
Sbjct: 1206 PIEDDKKKVSAELK 1219


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 503 TTSDLFQFMLGVFFGI 456
           T +D F+   G FFGI
Sbjct: 278 TAADFFEIDRGTFFGI 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,902
Number of Sequences: 336
Number of extensions: 4360
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)