Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30458
(782 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0144 + 26258841-26258948,26259099-26259212,26259335-262595... 152 3e-37
04_04_0678 + 27207340-27207447,27207555-27207668,27209111-272093... 150 1e-36
03_06_0282 - 32824950-32825135,32825247-32825505,32825651-328259... 147 8e-36
01_05_0337 + 21115388-21115961,21116471-21116597,21116683-211168... 85 5e-17
06_03_0810 - 24817268-24817350,24817547-24817697,24818441-248185... 31 0.78
10_01_0296 + 3069605-3070535,3071127-3071294,3075307-3076454 30 1.8
11_06_0074 - 19821699-19823702 29 5.5
11_01_0311 + 2322511-2323527 29 5.5
08_01_0089 - 646310-646397,646566-647932 29 5.5
01_01_0104 + 780442-781273,782514-783424 28 7.3
07_03_0507 - 18871260-18871361,18871444-18871560,18871792-188721... 28 9.6
04_03_0690 + 18751601-18753667 28 9.6
03_01_0006 + 65675-65808,66385-66457,68290-68526,68648-68785,688... 28 9.6
02_04_0030 + 19041107-19041334,19041413-19041733 28 9.6
02_01_0509 + 3694689-3695683,3695799-3695946,3696864-3696943,369... 28 9.6
01_06_0580 - 30380260-30380747,30380816-30381107 28 9.6
01_01_0241 + 1992553-1993231,1993820-1993918,1994611-1994649,199... 28 9.6
>02_05_0144 +
26258841-26258948,26259099-26259212,26259335-26259556,
26259660-26259734,26259827-26259943,26260046-26260296,
26260833-26260908,26261045-26261131,26261216-26261401
Length = 411
Score = 152 bits (368), Expect = 3e-37
Identities = 79/171 (46%), Positives = 105/171 (61%)
Frame = +3
Query: 237 LEIQFPLRRDSGDYEMILGYRAQHSTHRTPTKGGIRFSTDVTRDEVKALSALMTFKCACV 416
++++ + +D G +G+R QH R P KGGIR+ +V DEV AL+ LMT+K A
Sbjct: 35 IKVECTIPKDDGTLATFVGFRVQHDNSRGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA 94
Query: 417 DVPFGGAKAGIKINPKEYSEHELEKITRRFTLELAKKGFIGPGVDVPAPDMGTGEREMSW 596
VP+GGAK GI P E S ELE++TR FT ++ IG DVPAPDMGT + M+W
Sbjct: 95 AVPYGGAKGGIGCTPGELSRSELERLTRVFTQKI--HDLIGINTDVPAPDMGTNAQTMAW 152
Query: 597 IADTYAKTVGFQDINAHACVTGKPINQGGIHGRVSATGRGVFHGLENFINE 749
I D Y+K G ++ A VTGKPI+ GG GR +ATGRGV + E + E
Sbjct: 153 ILDEYSKFHG----HSPAVVTGKPIDLGGSLGRDAATGRGVMYATEALLTE 199
>04_04_0678 +
27207340-27207447,27207555-27207668,27209111-27209332,
27209407-27209481,27209569-27209685,27210145-27210395,
27210686-27210761,27210862-27210948,27211037-27211222
Length = 411
Score = 150 bits (363), Expect = 1e-36
Identities = 78/171 (45%), Positives = 105/171 (61%)
Frame = +3
Query: 237 LEIQFPLRRDSGDYEMILGYRAQHSTHRTPTKGGIRFSTDVTRDEVKALSALMTFKCACV 416
++++ + +D G +G+R QH R P KGGIR+ +V DEV AL+ LMT+K A
Sbjct: 35 IKVECTIPKDDGTLASFIGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA 94
Query: 417 DVPFGGAKAGIKINPKEYSEHELEKITRRFTLELAKKGFIGPGVDVPAPDMGTGEREMSW 596
+P+GGAK GI P E S ELE++TR FT ++ IG DVPAPDMGT + M+W
Sbjct: 95 AIPYGGAKGGIGCAPGELSTSELERLTRVFTQKI--HDLIGAHTDVPAPDMGTNSQTMAW 152
Query: 597 IADTYAKTVGFQDINAHACVTGKPINQGGIHGRVSATGRGVFHGLENFINE 749
I D Y+K G ++ A VTGKPI+ GG GR +ATGRGV + E + E
Sbjct: 153 ILDEYSKFHG----HSPAVVTGKPIDLGGSLGRDAATGRGVMYATEALLAE 199
>03_06_0282 -
32824950-32825135,32825247-32825505,32825651-32825901,
32826309-32826425,32826613-32826687,32826788-32827009,
32827396-32827509,32827694-32827801
Length = 443
Score = 147 bits (357), Expect = 8e-36
Identities = 76/171 (44%), Positives = 106/171 (61%)
Frame = +3
Query: 237 LEIQFPLRRDSGDYEMILGYRAQHSTHRTPTKGGIRFSTDVTRDEVKALSALMTFKCACV 416
++++ + +D G +G+R QH R P KGGIR+ +V DEV AL+ LMT+K A
Sbjct: 35 IKVECTIPKDDGTLASYVGFRVQHDNARGPMKGGIRYHHEVDPDEVNALAQLMTWKTAVA 94
Query: 417 DVPFGGAKAGIKINPKEYSEHELEKITRRFTLELAKKGFIGPGVDVPAPDMGTGEREMSW 596
++P+GGAK GI +P + S ELE++TR FT ++ IG DVPAPDMGT + M+W
Sbjct: 95 NIPYGGAKGGIGCSPGDLSISELERLTRVFTQKI--HDLIGIHTDVPAPDMGTNSQTMAW 152
Query: 597 IADTYAKTVGFQDINAHACVTGKPINQGGIHGRVSATGRGVFHGLENFINE 749
I D Y+K G+ + A VTGKP++ GG GR +ATGRGV E + E
Sbjct: 153 ILDEYSKFHGY----SPAVVTGKPVDLGGSLGRDAATGRGVLFATEALLAE 199
>01_05_0337 +
21115388-21115961,21116471-21116597,21116683-21116884,
21117460-21117546,21117622-21117681,21117800-21117886,
21118451-21118522,21118675-21118730,21118812-21118897,
21119427-21119517,21119593-21119750,21119827-21119918,
21120110-21120190,21120282-21120479
Length = 656
Score = 85.4 bits (202), Expect = 5e-17
Identities = 62/191 (32%), Positives = 88/191 (46%), Gaps = 1/191 (0%)
Frame = +3
Query: 150 EDLKSRTPIEEKKKKVAGIL-KLMEPCDHILEIQFPLRRDSGDYEMILGYRAQHSTHRTP 326
E + S P+ K + IL +L+EP + + P D G+ + G+R Q S P
Sbjct: 220 EVVHSLEPVLVKNSQHVQILERLLEP-ERCFIFRVPWVDDRGEAHVNRGFRVQFSQALGP 278
Query: 327 TKGGIRFSTDVTRDEVKALSALMTFKCACVDVPFGGAKAGIKINPKEYSEHELEKITRRF 506
+GG+RF +T K L+ T K A GGA G +PK SE E+ + + F
Sbjct: 279 CRGGLRFHPSMTLSVAKFLAFEQTLKNALSQYKLGGAAGGSDFDPKGKSESEIMRFCQSF 338
Query: 507 TLELAKKGFIGPGVDVPAPDMGTGEREMSWIADTYAKTVGFQDINAHACVTGKPINQGGI 686
EL + ++GP D PA D+G G REM ++ Y + G N TG I G
Sbjct: 339 MDELYR--YLGPDQDFPAEDVGVGPREMGYLFGQYRRLSGHFQGN----FTGPKIFWSGS 392
Query: 687 HGRVSATGRGV 719
R ATG G+
Sbjct: 393 SFRTEATGYGL 403
>06_03_0810 - 24817268-24817350,24817547-24817697,24818441-24818542,
24818722-24818802,24818900-24819020,24819284-24819401,
24819514-24819637,24819898-24819963,24820117-24820407,
24820455-24820592,24820967-24821116,24821240-24821410,
24821543-24821746,24821880-24822104,24822461-24822595,
24822995-24823096,24823586-24823882,24823979-24824167,
24824581-24824628,24824872-24825070,24825501-24825730,
24826373-24826568,24826695-24826882
Length = 1202
Score = 31.5 bits (68), Expect = 0.78
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +3
Query: 465 EYSEHELEKITRRFTLELAKKGFIGPGVDVPAPDMGTGEREMSWIADTYAKTVGFQDINA 644
E S H L+K+T + + F+G ++V T E S + D Y TV +D +
Sbjct: 893 EPSPHSLQKLTLQSVKDAVMNQFVGDNMEVSIVGDFTEEEVESCVLD-YLGTVYIKDTDE 951
Query: 645 HAC--VTGKPINQGG 683
AC + G N+ G
Sbjct: 952 RACAYIAGPAPNRWG 966
>10_01_0296 + 3069605-3070535,3071127-3071294,3075307-3076454
Length = 748
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/88 (22%), Positives = 37/88 (42%)
Frame = +3
Query: 93 HMVEYFFHRACQVVEDKLVEDLKSRTPIEEKKKKVAGILKLMEPCDHILEIQFPLRRDSG 272
H F + V ED + + + +E K+KV + E + ++ ++ + G
Sbjct: 642 HSGRAMFDKEIAVEEDIFILEEIGKLAMECLKEKVEERPDMKEVAERLVMLRRARKHGQG 701
Query: 273 DYEMILGYRAQHSTHRTPTKGGIRFSTD 356
Y + + + S TPT G FST+
Sbjct: 702 SYNLSPRHHEEISIETTPTSFGADFSTN 729
>11_06_0074 - 19821699-19823702
Length = 667
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 456 NPKEYSEHELEKITRRFTLELAKKGF 533
N + ++EH++EKIT ++ + K GF
Sbjct: 27 NIRSFTEHDIEKITSNYSTLIGKGGF 52
>11_01_0311 + 2322511-2323527
Length = 338
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +1
Query: 397 PSSARAWTCLSAVLRPVSRSIPKNTPSMNWKRSLVVSPL-NLPKKDSLGLAWMSPLLTWV 573
PSS R TC S+ S S P + +++++ +L+ +P L + + G + + P L++
Sbjct: 36 PSSTRVSTCSSSSSTTASSSSPTLSVTVSYRATLLAAPAPPLQLRLTWGHSPLGPTLSFA 95
Query: 574 PA 579
P+
Sbjct: 96 PS 97
>08_01_0089 - 646310-646397,646566-647932
Length = 484
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 453 INPKEYSEHELEKITRRFTLELAKKGFIGPGVDVPAPDMGTGEREMSWIADTYAKTVG 626
I P+ EHE + L L +I GV +P P G GE + +A ++A+ +G
Sbjct: 16 IRPELPPEHETTVHLTPWDLPLLTAEYIQKGVLLPKPPTG-GEHLVKHLASSFARALG 72
>01_01_0104 + 780442-781273,782514-783424
Length = 580
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 459 PKEYSEHELEKITRRFTLELAKKGF 533
P YS +++KITRRF +L + GF
Sbjct: 324 PTRYSFSDVKKITRRFKEQLGQGGF 348
>07_03_0507 -
18871260-18871361,18871444-18871560,18871792-18872120,
18872704-18872871,18873592-18873685,18873707-18873766,
18874702-18874762,18875258-18875319,18875729-18875856,
18876783-18876852,18877472-18877630
Length = 449
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -3
Query: 372 LHLWLRPLR-IEYLLWLESCVWNVVRDS 292
LH +LRPL + Y W+ V NV+RD+
Sbjct: 281 LHNFLRPLLFLMYSFWVPQIVTNVIRDT 308
>04_03_0690 + 18751601-18753667
Length = 688
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -2
Query: 604 SAIQDISRSPVPMSGAGTSTPGPMNP---FLASSRVKRR 497
S D+ SP+P SGAG + P P P F A+ R+ R+
Sbjct: 67 SITADLFPSPLPSSGAGPTPPPPPPPRGAFEAAERLIRQ 105
>03_01_0006 + 65675-65808,66385-66457,68290-68526,68648-68785,
68871-69005,69131-69310,69495-69701,69821-69943,
70240-70359,70758-70880,72067-72171,72254-72398,
73443-73607,73669-73907,74452-74484,74977-75058,
75200-75360,75739-75951,76789-76971,77051-77220,
77375-77474
Length = 1021
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -3
Query: 372 LHLWLRPLRIEYLLWLESCVWNVVRDSLISFRNRQNRASE 253
++L L P++ L WN+V D+ ++F NR++ E
Sbjct: 905 VYLLLDPMKFAVRYGLSGKAWNLVIDNKVAFTNRKDFGRE 944
>02_04_0030 + 19041107-19041334,19041413-19041733
Length = 182
Score = 27.9 bits (59), Expect = 9.6
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 6/101 (5%)
Frame = -1
Query: 779 GCTDHAHVVGFVDEVLQAVEYAPARG*NSAVDATLVNRFASDAGVSVDVLKTDGLRISIG 600
GC VV VDEV A A R + D ++ F S A D LRI+
Sbjct: 80 GCLAAGAVVSLVDEVGSAASIADGRPVKVSTDMSV--SFVSLA----QARPGDRLRITAR 133
Query: 599 DPRH-FSFAGTHV-----RSGDIHARPNESFFGKFKGETTS 495
H +++ THV +G++ A S FG+ K +TS
Sbjct: 134 ALGHKGAYSATHVLISNAATGEVVAEGRHSLFGRMKVVSTS 174
>02_01_0509 + 3694689-3695683,3695799-3695946,3696864-3696943,
3697214-3698062,3698193-3698337,3698426-3698677,
3698780-3699089,3699415-3699524
Length = 962
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +3
Query: 93 HMVEYFFHRACQVVEDKLVEDLKSRTPIEEKKKKVAGILKLMEPCDHILEIQFPLRRDS 269
H F AC ++ KLV+ L +EE+ +L L+ LE +PL++D+
Sbjct: 882 HGCNTFQPLACSILATKLVDSLSYDRVLEERVLASLSLLNLVRH-PECLEKLYPLKKDT 939
>01_06_0580 - 30380260-30380747,30380816-30381107
Length = 259
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 592 DISRSPVPMSGAGTSTPGPMNPFLASSRV 506
D + SP P SG GTS P P SS++
Sbjct: 5 DQNPSPTPASGTGTSVPPPGRATTVSSQL 33
>01_01_0241 +
1992553-1993231,1993820-1993918,1994611-1994649,
1994806-1995857
Length = 622
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 459 PKEYSEHELEKITRRFTLELAKKGF 533
PK Y+ EL+KITR F +L + G+
Sbjct: 324 PKRYNYSELKKITRSFKDKLGQGGY 348
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,606,815
Number of Sequences: 37544
Number of extensions: 503798
Number of successful extensions: 1537
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1530
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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