Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30458
(782 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73899-2|CAA98074.1| 536|Caenorhabditis elegans Hypothetical pr... 339 1e-93
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 33 0.30
U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical pr... 31 0.93
AF000299-10|AAC47986.1| 338|Caenorhabditis elegans Seven tm rec... 30 1.6
Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical p... 30 2.1
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 28 8.7
>Z73899-2|CAA98074.1| 536|Caenorhabditis elegans Hypothetical
protein ZK829.4 protein.
Length = 536
Score = 339 bits (834), Expect = 1e-93
Identities = 153/249 (61%), Positives = 199/249 (79%), Gaps = 1/249 (0%)
Frame = +3
Query: 30 ASHEIPDKLKDIPTSANPKFFHMVEYFFHRACQVVEDKLVEDLKSRTPIEEKKKK-VAGI 206
A ++ D+ K + NP F+ MV+++F++ +V+ KL E+LKS + ++ KK V+GI
Sbjct: 24 AHSQVLDEQKPMEEQVNPSFYKMVDFYFNKGAEVIAPKLAEELKSNSLSQKDKKNLVSGI 83
Query: 207 LKLMEPCDHILEIQFPLRRDSGDYEMILGYRAQHSTHRTPTKGGIRFSTDVTRDEVKALS 386
L ++P + +L I FP+RRD+G++E+I +RAQHS HRTPTKGGIR+S DV DEVKALS
Sbjct: 84 LGAIKPVNKVLYITFPIRRDNGEFEVIEAWRAQHSEHRTPTKGGIRYSLDVCEDEVKALS 143
Query: 387 ALMTFKCACVDVPFGGAKAGIKINPKEYSEHELEKITRRFTLELAKKGFIGPGVDVPAPD 566
ALMT+KCA VDVPFGGAK G+KI+PK+Y+++E+EKITRR +E AKKGF+GPGVDVPAPD
Sbjct: 144 ALMTYKCAVVDVPFGGAKGGVKIDPKQYTDYEIEKITRRIAIEFAKKGFLGPGVDVPAPD 203
Query: 567 MGTGEREMSWIADTYAKTVGFQDINAHACVTGKPINQGGIHGRVSATGRGVFHGLENFIN 746
MGTGEREM WIADTYA+T+G D +A AC+TGKPI GGIHGRVSATGRGV+ GLE F N
Sbjct: 204 MGTGEREMGWIADTYAQTIGHLDRDASACITGKPIVSGGIHGRVSATGRGVWKGLEVFTN 263
Query: 747 EANYMSMIG 773
+A+YM M+G
Sbjct: 264 DADYMKMVG 272
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 32.7 bits (71), Expect = 0.30
Identities = 25/93 (26%), Positives = 40/93 (43%)
Frame = +3
Query: 465 EYSEHELEKITRRFTLELAKKGFIGPGVDVPAPDMGTGEREMSWIADTYAKTVGFQDINA 644
+Y++H E +F +L KG G G + + T E + D + DINA
Sbjct: 148 DYTKHPSEPKDTKFRPQLRLKGHEGEGYGMSWSN--TREGHLLTAGDD--GMICHWDINA 203
Query: 645 HACVTGKPINQGGIHGRVSATGRGVFHGLENFI 743
+ ++G+ + Q G S FH L NF+
Sbjct: 204 NQTISGQIVPQSKFKGHSSNAEDVSFHALHNFV 236
>U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical
protein T28D9.7 protein.
Length = 982
Score = 31.1 bits (67), Expect = 0.93
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 75 ANPKFFHMVEYFFHRACQVVEDKLVEDLKSR--TPIEEKKKKVAGILKLMEPCDHILEIQ 248
AN FF + E F+R V DLKSR +++ +++A IL++ME H+
Sbjct: 482 ANQMFFLLDETAFNR--NATRYMSVGDLKSRYGDKVDDVAEEIAVILRIMEKLWHVFMPD 539
Query: 249 FPLRRDSGDY 278
+R +GD+
Sbjct: 540 SYIRTMTGDF 549
>AF000299-10|AAC47986.1| 338|Caenorhabditis elegans Seven tm
receptor protein 162 protein.
Length = 338
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 317 VCGMLCAIA*YHFVIARIAPQRKLNLKNVIAWF 219
+CG+L + HF+ A QRK NLK W+
Sbjct: 95 ICGVLMPMFVVHFIFRYFAMQRKGNLKYFEGWY 127
>Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical
protein Y41E3.11 protein.
Length = 917
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = -2
Query: 718 TPLPVAETLPWMPPWLIGLPVTQA*ALMS*KPTVFA--*VSAIQDISRSPVPMSGAGTST 545
+PL E +PP IGLPV + A S PTV A V+ S P P+ A ++
Sbjct: 676 SPLVREEPTIILPPVKIGLPVVVSTADDSSSPTVAAAVVVAGNNQFSFPPPPVVMAAPAS 735
Query: 544 PGPMNPFLASSRVKR 500
P P ++++
Sbjct: 736 AAPQTPIQQQQKIQQ 750
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical
protein W06A7.3f protein.
Length = 2488
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 171 PIEEKKKKVAGILKLMEPCDHILEIQFPLRRDSGDYEMIL 290
PIE +++ + K E CDH+++ Q L R S E I+
Sbjct: 444 PIENSEQETVAV-KATESCDHVVDSQKTLERASSLEEDIM 482
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical
protein W06A7.3c protein.
Length = 2484
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 171 PIEEKKKKVAGILKLMEPCDHILEIQFPLRRDSGDYEMIL 290
PIE +++ + K E CDH+++ Q L R S E I+
Sbjct: 444 PIENSEQETVAV-KATESCDHVVDSQKTLERASSLEEDIM 482
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical
protein W06A7.3a protein.
Length = 2607
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 171 PIEEKKKKVAGILKLMEPCDHILEIQFPLRRDSGDYEMIL 290
PIE +++ + K E CDH+++ Q L R S E I+
Sbjct: 444 PIENSEQETVAV-KATESCDHVVDSQKTLERASSLEEDIM 482
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,732,849
Number of Sequences: 27780
Number of extensions: 417844
Number of successful extensions: 1253
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1252
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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