Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30458
         (782 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    24   1.8  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           24   1.8  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           24   1.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.2  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   7.4  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +1

Query: 502 VSPLNLPKKD-SLGLAWMSPLLTWVPANEK 588
           V P N+  KD S+ L W+S  + W   N K
Sbjct: 172 VVPGNMGLKDQSMALRWVSENIEWFGGNPK 201


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +1

Query: 502 VSPLNLPKKD-SLGLAWMSPLLTWVPANEK 588
           V P N+  KD S+ L W+S  + W   N K
Sbjct: 43  VVPGNMGLKDQSMALRWVSENIEWFGGNPK 72


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +1

Query: 502 VSPLNLPKKD-SLGLAWMSPLLTWVPANEK 588
           V P N+  KD S+ L W+S  + W   N K
Sbjct: 172 VVPGNMGLKDQSMALRWVSENIEWFGGNPK 201


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 83  EVLPHGRIFFPPSLSSCRRQ 142
           +VLP+G + FPP  +   RQ
Sbjct: 53  QVLPNGNLVFPPFRAEDYRQ 72


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
 Frame = +3

Query: 264 DSGDYEMILGY-RAQ---HSTHRTPTKGGIRFSTDVTRDEV 374
           ++ DY M +G  RA+   HS+     + G+ F   VTRD V
Sbjct: 417 ENTDYFMPIGRPRAKDYGHSSGSVIDRNGVMFFNMVTRDSV 457


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,219
Number of Sequences: 438
Number of extensions: 4815
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)