Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30454
         (754 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46241-7|CAA86320.1|  214|Caenorhabditis elegans Hypothetical pr...    51   8e-07
AC024882-15|AAF60936.1|  688|Caenorhabditis elegans Hypothetical...    29   2.7  
AF067222-3|AAC17019.1|  292|Caenorhabditis elegans Hypothetical ...    29   3.5  
AF067609-11|AAC17532.2|  252|Caenorhabditis elegans Hypothetical...    28   6.2  
AF067211-1|AAC16986.1|  455|Caenorhabditis elegans Hypothetical ...    28   6.2  

>Z46241-7|CAA86320.1|  214|Caenorhabditis elegans Hypothetical
           protein C38D4.9 protein.
          Length = 214

 Score = 51.2 bits (117), Expect = 8e-07
 Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
 Frame = +1

Query: 535 LQDLKGFSKPKIKFEQYETPAHIAAIALYTIQTQFGDLEDKLILDAGCGPGNL-SIGAVL 711
           L +L+GF KPKIK EQY T + +A   +  I    G  E K ++D GCG G L +  A +
Sbjct: 10  LNELEGFEKPKIKLEQYATSSELAVSMMEMIDETIG-FEGKKLIDIGCGCGMLMTTAATM 68

Query: 712 LGAGFVTSVEID 747
                V  V+ID
Sbjct: 69  YELETVLGVDID 80


>AC024882-15|AAF60936.1|  688|Caenorhabditis elegans Hypothetical
           protein Y9C9A.13 protein.
          Length = 688

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = -1

Query: 706 LHQYSDFQGHNPHLK*VYLPNLQIVFELCTEQLQQYERVSR 584
           + QYS+ +G  P+LK +      + F +  E LQ++E++ +
Sbjct: 235 MRQYSESRGFIPNLKFLDCSGTDVTFSILDELLQKHEKLKK 275


>AF067222-3|AAC17019.1|  292|Caenorhabditis elegans Hypothetical
           protein H11E01.1 protein.
          Length = 292

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 13  QSCNVIFLFVKSKLLTN*ILFQTSYLKT-HRFLKHYMLSPNSYLETLDGV 159
           Q+C+V  L + S    N  L++ +  K  + FLKH+M   N  LE L+ +
Sbjct: 190 QTCSVSNLLIVSTNSENVTLWEPNTAKDLNLFLKHWMQGSNGRLERLEAI 239


>AF067609-11|AAC17532.2|  252|Caenorhabditis elegans Hypothetical
           protein C23H5.1 protein.
          Length = 252

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 622 TIQTQFGD-LEDKLILDAGCGPGNLSIGAVLLGAGFVTSVE 741
           TI+  FG  L  K +LD GCG G+ S   +  GA  V  V+
Sbjct: 26  TIKKAFGHILVGKEVLDVGCGNGHYSFDFLRWGAHKVFGVD 66


>AF067211-1|AAC16986.1|  455|Caenorhabditis elegans Hypothetical
           protein B0205.10 protein.
          Length = 455

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 749 ASISTDVTNPAPSNTAPILRFPGPQP 672
           AS+      PAP+ TAP ++ PGP P
Sbjct: 63  ASVQQQPEAPAPAPTAPDVQQPGPAP 88


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,556,950
Number of Sequences: 27780
Number of extensions: 383205
Number of successful extensions: 1176
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1176
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)