Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30453
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    26   0.31 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.9  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   5.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   6.7  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   6.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.8  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +2

Query: 332 HKYVFVI-ILLLFEF*DLNVYMYWNILVIRVLFMIVFFL 445
           HK+  +  ILL  E  DL+   Y  ++V  +LF+++F L
Sbjct: 93  HKWSTLFEILLKLESKDLSRTFYGFVIVAHLLFLVIFVL 131


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 368  EF*DLNVYMYWNILVIRVLFMIVFFLL 448
            E  DL   M +  L++  L++IV FLL
Sbjct: 1217 ELKDLRDKMVFTFLMLNSLYVIVIFLL 1243


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 368  EF*DLNVYMYWNILVIRVLFMIVFFLL 448
            E  DL   M +  L++  L++IV FLL
Sbjct: 1217 ELKDLRDKMVFTFLMLNSLYVIVIFLL 1243


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 58  TRWAVSSSTHLRNKKKS*TFL 120
           TR + SSSTH  +++ S +FL
Sbjct: 384 TRKSTSSSTHTSSQQTSDSFL 404


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -1

Query: 545 IKTIKRLQKSDNGHK 501
           +K +KRL++++NG K
Sbjct: 434 LKALKRLERANNGVK 448


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 419 VLFMIVFFLLANDIIN 466
           +LF  VFF++ +D +N
Sbjct: 6   ILFFGVFFIIFSDFVN 21


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = +1

Query: 535 IVFIGMGNYFDHIAAFII----LSF*CVLMELFVYYYKY 639
           ++F+    YF   +AFII    L F CVL+ L   YY Y
Sbjct: 206 LLFLPCIYYF--YSAFIIFTIHLLFYCVLIILLCIYYFY 242


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,407
Number of Sequences: 336
Number of extensions: 3172
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)