Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30453
         (650 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    27   0.21 
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           27   0.21 
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   5.9  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 12/91 (13%)
 Frame = -2

Query: 250 WALSNSNYKVYNFMIHKASPI*VSKFIFKNYFSFNSICD--VHCIIEMFNFFFYSLDGWT 77
           W L    +  YN+ I K   + V++ I   YF  N I +  +  +I++ +  F+  DG  
Sbjct: 364 WDLIAPYFLDYNYTIPKEKHVEVARLIRNYYFESNKIDETTLKHLIDVASDRFFITDGEK 423

Query: 76  SS--------QPTWC*VVT--GAHLSSKLSS 14
           ++        QP W    T  GAH  S++ S
Sbjct: 424 AARMQAKVNRQPVWFYYYTYKGAHSISEIMS 454


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 12/91 (13%)
 Frame = -2

Query: 250 WALSNSNYKVYNFMIHKASPI*VSKFIFKNYFSFNSICD--VHCIIEMFNFFFYSLDGWT 77
           W L    +  YN+ I K   + V++ I   YF  N I +  +  +I++ +  F+  DG  
Sbjct: 364 WDLIAPYFLDYNYTIPKEKHVEVARLIRNYYFESNKIDETTLKHLIDVASDRFFITDGEK 423

Query: 76  SS--------QPTWC*VVT--GAHLSSKLSS 14
           ++        QP W    T  GAH  S++ S
Sbjct: 424 AARMQAKVNRQPVWFYYYTYKGAHSISEIMS 454


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 374 KIQIIKE*LQKHIYEEKKII 315
           K QI++   Q+HI  EK+I+
Sbjct: 401 KAQIVETRQQQHIMSEKRIM 420


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,548
Number of Sequences: 438
Number of extensions: 3475
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)