BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30452
(714 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein. 27 0.77
AF046924-1|AAC08530.1| 122|Anopheles gambiae mucin protein. 25 2.4
AJ697720-1|CAG26913.1| 207|Anopheles gambiae putative odorant-b... 24 4.1
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 24 5.4
AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative acetyltr... 24 5.4
>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
Length = 1009
Score = 26.6 bits (56), Expect = 0.77
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -3
Query: 307 RMPAL-LIRISILPKLSIAVFISFSPSTTEL*SATATPPLSLIS 179
R+PAL L+ +ILP LS+ V I S S + PLS IS
Sbjct: 14 RLPALVLVTATILPILSLMVPIGHSQSVITDCDTSKCQPLSNIS 57
>AF046924-1|AAC08530.1| 122|Anopheles gambiae mucin protein.
Length = 122
Score = 25.0 bits (52), Expect = 2.4
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -3
Query: 235 PSTTEL*SATAT--PPLSLISLTTASAALDFPAPSLALPRSLTTTLAP 98
P TT + AT T P + ++ TT + ++A ++ TTT+AP
Sbjct: 24 PPTTTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVAP 71
>AJ697720-1|CAG26913.1| 207|Anopheles gambiae putative
odorant-binding protein OBPjj10 protein.
Length = 207
Score = 24.2 bits (50), Expect = 4.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 611 DIFSETRRRRGNNCVH 564
+ F TRRRRG C+H
Sbjct: 87 ETFPSTRRRRGALCMH 102
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 23.8 bits (49), Expect = 5.4
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -3
Query: 709 MIAPVSLKDSCTMYATTGAINSGFMASYI 623
+IAP + ++S Y+++GA + G SY+
Sbjct: 3051 LIAPETYENSSGRYSSSGANSLGSFLSYL 3079
>AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative
acetyltransferase protein.
Length = 471
Score = 23.8 bits (49), Expect = 5.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 454 LLEVITMRPYFCFLNVSH 401
LLEVI + Y +LN+ H
Sbjct: 115 LLEVIATQEYLYYLNIEH 132
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,272
Number of Sequences: 2352
Number of extensions: 13740
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -