Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30451
         (773 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7PW02 Cluster: ENSANGP00000010648; n=6; Endopterygota|...   100   8e-20
UniRef50_P83386 Cluster: Putative uncharacterized protein; n=4; ...    38   0.37 
UniRef50_Q9G8S5 Cluster: Orf312; n=1; Naegleria gruberi|Rep: Orf...    36   1.1  
UniRef50_Q6CX54 Cluster: Kluyveromyces lactis strain NRRL Y-1140...    34   4.5  
UniRef50_P08247 Cluster: Synaptophysin; n=61; Gnathostomata|Rep:...    34   4.5  
UniRef50_Q1YJ24 Cluster: Disulfide bond formation protein; n=11;...    33   6.0  
UniRef50_Q4S603 Cluster: Chromosome 9 SCAF14729, whole genome sh...    33   7.9  
UniRef50_A5K7A6 Cluster: Putative uncharacterized protein; n=1; ...    33   7.9  
UniRef50_A7TIX3 Cluster: Putative uncharacterized protein; n=1; ...    33   7.9  

>UniRef50_Q7PW02 Cluster: ENSANGP00000010648; n=6;
           Endopterygota|Rep: ENSANGP00000010648 - Anopheles
           gambiae str. PEST
          Length = 176

 Score = 99.5 bits (237), Expect = 8e-20
 Identities = 44/142 (30%), Positives = 72/142 (50%)
 Frame = +1

Query: 85  VRFDPSYAKTVPGVXXXXXXXXXXXXXXXXQASSFWSNGRGVYFNVIAQFGIWYSVGILF 264
           +R+DP Y +T+PG+                + S F    +G +FN +A  G W+S  +L 
Sbjct: 21  IRYDPEYVRTIPGIVKIVCIVLNLIGFICIEFSYFSYRPQGSFFNTVAMLGFWFSGIMLV 80

Query: 265 CYLFHIVEKYHNWKWLRIEMIADVAFVFLYLTTSTIVVXXXXXXXXXXXXXXXLTMVLFG 444
            YLFH+ EK+H   WL+IE+     +  LY+  +++                   M+ +G
Sbjct: 81  FYLFHVCEKFHKIPWLKIELYFCAGWAALYMIAASVAASTSIEAFQAAAFFGYCAMIGYG 140

Query: 445 SDAFIKFNAIKAGELAQGRKVV 510
            DAF+KF +++AGE+AQG + V
Sbjct: 141 VDAFLKFKSVRAGEIAQGSRTV 162


>UniRef50_P83386 Cluster: Putative uncharacterized protein; n=4;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 270

 Score = 37.5 bits (83), Expect = 0.37
 Identities = 30/142 (21%), Positives = 53/142 (37%), Gaps = 5/142 (3%)
 Frame = +1

Query: 88  RFDPSYAKTVPGVXXXXXXXXXXXXXXXXQASSFWSNGRGVYFNVIAQFGIWYSVGILFC 267
           R D  Y +T+ G+                     +  G G +   ++  GI+ +  +L  
Sbjct: 113 RLDCEYIRTLGGIMKIVCIVLCLLTFIFVMMGPAYYTGVG-WATFVSSVGIFVTTSLLTL 171

Query: 268 YLFHIVEKYHNWKWLRIEMIADVAF-VFLYLTTSTIVVXXXXXXXXXXXXXXXL----TM 432
           YLF +V+   +  W+  EM+   A+ VF ++    + V                     M
Sbjct: 172 YLFRVVDTLPSINWIVCEMVYCFAWTVFFFIAACVLAVASSQFRGTFAWAIAAFFAFGAM 231

Query: 433 VLFGSDAFIKFNAIKAGELAQG 498
             +G D ++KF + K  E A G
Sbjct: 232 CAYGFDCYLKFLSWKNNERATG 253


>UniRef50_Q9G8S5 Cluster: Orf312; n=1; Naegleria gruberi|Rep: Orf312
           - Naegleria gruberi
          Length = 312

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 14/58 (24%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
 Frame = +1

Query: 184 SFWSNGRGVYFNVIAQFGIWYSVGILFCYLFHIVEKYHNWKW-LRIEMIADVAFVFLY 354
           +F  N  G++ ++++   IWYS  ++  +L  ++  Y N+K+ L + ++A   F++ +
Sbjct: 109 AFNLNSIGLFISLVSYKKIWYSTVVMVAFLCSVLRVYENYKYELNLRLVAFAYFLYSF 166


>UniRef50_Q6CX54 Cluster: Kluyveromyces lactis strain NRRL Y-1140
           chromosome A of strain NRRL Y- 1140 of Kluyveromyces
           lactis; n=2; Saccharomycetales|Rep: Kluyveromyces lactis
           strain NRRL Y-1140 chromosome A of strain NRRL Y- 1140
           of Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
           (Candida sphaerica)
          Length = 977

 Score = 33.9 bits (74), Expect = 4.5
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = +1

Query: 208 VYFNVIAQFGIWYSVGILFCYLFHIVEKYHNWKWLRIEMIADVAFVFLYLTTSTIVV 378
           V  N    F  W +V  LFC L+H    Y         +++ ++ VFLY+   T+VV
Sbjct: 303 VIVNTFNSFMFWTTVTSLFCMLWHFPLWYMGISGYEAVILSTLSPVFLYIPLVTVVV 359


>UniRef50_P08247 Cluster: Synaptophysin; n=61; Gnathostomata|Rep:
           Synaptophysin - Homo sapiens (Human)
          Length = 313

 Score = 33.9 bits (74), Expect = 4.5
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +1

Query: 211 YFNVIAQFGIWYSVGILFCYLFHIVEKY-HNWKWLRIEMIADVAFVFLYLTTST 369
           +F  +A F   YS+G L  Y+F +  KY  N K   ++ +A   F F++L +S+
Sbjct: 106 FFVTVAVFAFLYSMGALATYIF-LQNKYRENNKGPMLDFLATAVFAFMWLVSSS 158


>UniRef50_Q1YJ24 Cluster: Disulfide bond formation protein; n=11;
           Alphaproteobacteria|Rep: Disulfide bond formation
           protein - Aurantimonas sp. SI85-9A1
          Length = 141

 Score = 33.5 bits (73), Expect = 6.0
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = -3

Query: 549 GRWCGDVRVSLFGHDLASLRQFACLYRVELYKGVAPEKHHSQVAEKPSC 403
           G W  D RV  +G  L+       L+ + LY G+ PE      A  PSC
Sbjct: 57  GLWWQDARVGRYGVALSLGGGMVALWHIGLYAGIIPEPVQPCTATGPSC 105


>UniRef50_Q4S603 Cluster: Chromosome 9 SCAF14729, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 9 SCAF14729, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 336

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +1

Query: 211 YFNVIAQFGIWYSVGILFCYLFHIVEKY-HNWKWLRIEMIADVAFVFLYLTTS 366
           +F  I  F   YS+  L  Y F ++EKY  N K  +I+ +    F F++L +S
Sbjct: 99  FFVTIGVFSFLYSMAALSAYCF-VLEKYRENNKGPQIDFVVTAVFAFMWLVSS 150


>UniRef50_A5K7A6 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 940

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +3

Query: 144  NIQFDCLHLHSSFVFLVKWTWSLLQCYSTIWYLVF 248
            N  ++  HLHS +VF+  +T +L+ C   ++Y  F
Sbjct: 905  NYDYNIFHLHSDYVFITSFTSTLIFCVLYMFYFYF 939


>UniRef50_A7TIX3 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 272

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = +1

Query: 187 FWSNGRGVYFNVIAQFGIWYSVGILFCYLFHIVEKYHNWKWLRIEMIADVAFVFLYLTTS 366
           +W+ G  V F +   F I Y   +LF Y      KY  WKWL + +     F+     T+
Sbjct: 27  WWTIGHTVSFVLGVLFSITYFYHVLFFY------KYRQWKWLFLRLDRTYQFIPGNTWTA 80

Query: 367 TIV 375
           TI+
Sbjct: 81  TII 83


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,772,071
Number of Sequences: 1657284
Number of extensions: 13595793
Number of successful extensions: 32405
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 31292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32378
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65027411410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)