Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30451
         (773 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0281 - 16360082-16361059,16361608-16361688,16363287-163636...    29   3.1  
10_08_0513 + 18460095-18460170,18460362-18460441,18461029-184614...    29   4.1  
10_08_0804 + 20700414-20700723,20700813-20700924,20701380-207014...    29   5.4  
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832...    29   5.4  
10_08_0803 + 20686550-20686850,20686940-20687051,20687803-20688175     28   7.2  
01_03_0182 + 13537522-13539699                                         28   7.2  
01_05_0630 - 23811576-23811728,23812473-23812561,23812644-238127...    28   9.5  

>09_04_0281 -
           16360082-16361059,16361608-16361688,16363287-16363650,
           16363675-16364348
          Length = 698

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 494 RDARSWPKRLTRTSPHHRPC 553
           R+ R WPKRLT  +   RPC
Sbjct: 97  RETRLWPKRLTSPTDRCRPC 116


>10_08_0513 +
           18460095-18460170,18460362-18460441,18461029-18461491,
           18461914-18462073,18462177-18462451,18462634-18462801,
           18463012-18463064
          Length = 424

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +3

Query: 195 KWTWS-LLQCYSTIWYLVFSWHPFLLSISHSR 287
           +WTW  LLQC S +  +  +WH  L    H R
Sbjct: 275 RWTWQPLLQCTSHMCPVKINWHLMLKDKEHYR 306


>10_08_0804 +
           20700414-20700723,20700813-20700924,20701380-20701467,
           20702530-20702910
          Length = 296

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 537 HTTGHAVRPSTDQYRYNYCFK 599
           H T    R S+DQ+++ YCFK
Sbjct: 100 HETTDGTRGSSDQFQWGYCFK 120


>03_06_0417 -
           33782577-33782687,33782996-33783052,33783110-33783205,
           33783252-33783284,33783543-33783599,33783968-33784060,
           33784308-33784395,33784812-33784835,33784956-33785164
          Length = 255

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +1

Query: 193 SNGRGVYFNV-IAQFGIWYSVGILFCYLFHI 282
           SNG  +++    A FG+ Y  GI+FC L+ I
Sbjct: 164 SNGSQIFYPAGFAIFGLGYCFGIVFCSLYKI 194


>10_08_0803 + 20686550-20686850,20686940-20687051,20687803-20688175
          Length = 261

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 537 HTTGHAVRPSTDQYRYNYCFK 599
           H T    R S+DQ+++ YCFK
Sbjct: 97  HETTGGTRGSSDQFQWGYCFK 117


>01_03_0182 + 13537522-13539699
          Length = 725

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +3

Query: 162 LHLHSSFVFLVK-WTWSLLQCYSTIWYLVFSWHPFLLSISHSRKIPQ 299
           L + +  +F++  WTW+ L+     W   FSW+ F   I      P+
Sbjct: 388 LEVCAVLIFMMSPWTWAWLKVRKYNWLACFSWYLFSSRIGWPENRPR 434


>01_05_0630 -
           23811576-23811728,23812473-23812561,23812644-23812764,
           23812867-23812992,23813399-23813505,23813742-23813856,
           23815071-23815274
          Length = 304

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 178 ASSFWSNGRGVYFNVIAQFGIWYSVGILFCYLFHIVEK 291
           A+S W +GR ++F++ A   +  S+GIL     HI  K
Sbjct: 125 ANSLWLDGRTIHFSINAWVLVVASLGILPILPKHIASK 162


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,210,463
Number of Sequences: 37544
Number of extensions: 366378
Number of successful extensions: 852
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)