BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30451 (773 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X06389-1|CAA29686.1| 296|Homo sapiens synaptophysin protein. 34 0.65 U93305-3|AAB92358.1| 313|Homo sapiens synaptophysin protein. 34 0.65 BC064550-1|AAH64550.1| 313|Homo sapiens synaptophysin protein. 34 0.65 X87852-1|CAA61132.1| 1871|Homo sapiens SEX protein protein. 32 2.0 BX936365-2|CAI43194.1| 1871|Homo sapiens plexin A3 protein. 32 2.0 >X06389-1|CAA29686.1| 296|Homo sapiens synaptophysin protein. Length = 296 Score = 33.9 bits (74), Expect = 0.65 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Frame = +1 Query: 211 YFNVIAQFGIWYSVGILFCYLFHIVEKY-HNWKWLRIEMIADVAFVFLYLTTST 369 +F +A F YS+G L Y+F + KY N K ++ +A F F++L +S+ Sbjct: 89 FFVTVAVFAFLYSMGALATYIF-LQNKYRENNKGPMLDFLATAVFAFMWLVSSS 141 >U93305-3|AAB92358.1| 313|Homo sapiens synaptophysin protein. Length = 313 Score = 33.9 bits (74), Expect = 0.65 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Frame = +1 Query: 211 YFNVIAQFGIWYSVGILFCYLFHIVEKY-HNWKWLRIEMIADVAFVFLYLTTST 369 +F +A F YS+G L Y+F + KY N K ++ +A F F++L +S+ Sbjct: 106 FFVTVAVFAFLYSMGALATYIF-LQNKYRENNKGPMLDFLATAVFAFMWLVSSS 158 >BC064550-1|AAH64550.1| 313|Homo sapiens synaptophysin protein. Length = 313 Score = 33.9 bits (74), Expect = 0.65 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Frame = +1 Query: 211 YFNVIAQFGIWYSVGILFCYLFHIVEKY-HNWKWLRIEMIADVAFVFLYLTTST 369 +F +A F YS+G L Y+F + KY N K ++ +A F F++L +S+ Sbjct: 106 FFVTVAVFAFLYSMGALATYIF-LQNKYRENNKGPMLDFLATAVFAFMWLVSSS 158 >X87852-1|CAA61132.1| 1871|Homo sapiens SEX protein protein. Length = 1871 Score = 32.3 bits (70), Expect = 2.0 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = -3 Query: 420 AEKPSC*VCSRSKSHNNC*SCKVKEHKCNISYH 322 A++PSC +C ++ NC C + EH+C + H Sbjct: 788 AQRPSCGLCLKADPRFNCGWC-ISEHRCQLRTH 819 >BX936365-2|CAI43194.1| 1871|Homo sapiens plexin A3 protein. Length = 1871 Score = 32.3 bits (70), Expect = 2.0 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = -3 Query: 420 AEKPSC*VCSRSKSHNNC*SCKVKEHKCNISYH 322 A++PSC +C ++ NC C + EH+C + H Sbjct: 788 AQRPSCGLCLKADPRFNCGWC-ISEHRCQLRTH 819 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 104,727,933 Number of Sequences: 237096 Number of extensions: 2104336 Number of successful extensions: 3326 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3250 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3326 length of database: 76,859,062 effective HSP length: 89 effective length of database: 55,757,518 effective search space used: 9367263024 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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