Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30451
         (773 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97013-2|AAV58868.1|  190|Caenorhabditis elegans Hypothetical pr...    38   0.011
U97013-1|AAB52340.2|  270|Caenorhabditis elegans Hypothetical pr...    38   0.011
AF067609-5|AAC17534.1|  644|Caenorhabditis elegans Hypothetical ...    31   1.2  
Z75714-4|CAB00062.1|  360|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z49888-6|CAD44128.1|  428|Caenorhabditis elegans Hypothetical pr...    28   8.5  
Z49888-5|CAA90065.2|  409|Caenorhabditis elegans Hypothetical pr...    28   8.5  
Z47069-5|CAD44131.1|  428|Caenorhabditis elegans Hypothetical pr...    28   8.5  
Z47069-4|CAA87339.2|  409|Caenorhabditis elegans Hypothetical pr...    28   8.5  
U39849-10|AAA81054.3|  951|Caenorhabditis elegans Glutamate rece...    28   8.5  
AF318608-1|AAK01096.1|  409|Caenorhabditis elegans ionotropic gl...    28   8.5  
AF077530-2|AAC26265.1|  436|Caenorhabditis elegans Hypothetical ...    28   8.5  

>U97013-2|AAV58868.1|  190|Caenorhabditis elegans Hypothetical
           protein F28H1.4b protein.
          Length = 190

 Score = 37.5 bits (83), Expect = 0.011
 Identities = 30/142 (21%), Positives = 53/142 (37%), Gaps = 5/142 (3%)
 Frame = +1

Query: 88  RFDPSYAKTVPGVXXXXXXXXXXXXXXXXQASSFWSNGRGVYFNVIAQFGIWYSVGILFC 267
           R D  Y +T+ G+                     +  G G +   ++  GI+ +  +L  
Sbjct: 33  RLDCEYIRTLGGIMKIVCIVLCLLTFIFVMMGPAYYTGVG-WATFVSSVGIFVTTSLLTL 91

Query: 268 YLFHIVEKYHNWKWLRIEMIADVAF-VFLYLTTSTIVVXXXXXXXXXXXXXXXL----TM 432
           YLF +V+   +  W+  EM+   A+ VF ++    + V                     M
Sbjct: 92  YLFRVVDTLPSINWIVCEMVYCFAWTVFFFIAACVLAVASSQFRGTFAWAIAAFFAFGAM 151

Query: 433 VLFGSDAFIKFNAIKAGELAQG 498
             +G D ++KF + K  E A G
Sbjct: 152 CAYGFDCYLKFLSWKNNERATG 173


>U97013-1|AAB52340.2|  270|Caenorhabditis elegans Hypothetical
           protein F28H1.4a protein.
          Length = 270

 Score = 37.5 bits (83), Expect = 0.011
 Identities = 30/142 (21%), Positives = 53/142 (37%), Gaps = 5/142 (3%)
 Frame = +1

Query: 88  RFDPSYAKTVPGVXXXXXXXXXXXXXXXXQASSFWSNGRGVYFNVIAQFGIWYSVGILFC 267
           R D  Y +T+ G+                     +  G G +   ++  GI+ +  +L  
Sbjct: 113 RLDCEYIRTLGGIMKIVCIVLCLLTFIFVMMGPAYYTGVG-WATFVSSVGIFVTTSLLTL 171

Query: 268 YLFHIVEKYHNWKWLRIEMIADVAF-VFLYLTTSTIVVXXXXXXXXXXXXXXXL----TM 432
           YLF +V+   +  W+  EM+   A+ VF ++    + V                     M
Sbjct: 172 YLFRVVDTLPSINWIVCEMVYCFAWTVFFFIAACVLAVASSQFRGTFAWAIAAFFAFGAM 231

Query: 433 VLFGSDAFIKFNAIKAGELAQG 498
             +G D ++KF + K  E A G
Sbjct: 232 CAYGFDCYLKFLSWKNNERATG 253


>AF067609-5|AAC17534.1|  644|Caenorhabditis elegans Hypothetical
           protein C23H5.7 protein.
          Length = 644

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 8/44 (18%), Positives = 25/44 (56%)
 Frame = +1

Query: 214 FNVIAQFGIWYSVGILFCYLFHIVEKYHNWKWLRIEMIADVAFV 345
           ++    FG+ Y++  +  ++F  ++  + W W+ + ++ D+ F+
Sbjct: 51  WSFFVSFGVMYNMFAMVIFIFADIKTQYFWNWIFLNVMFDMVFI 94


>Z75714-4|CAB00062.1|  360|Caenorhabditis elegans Hypothetical
           protein ZC434.8 protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 178 ASSFWSNGRGVYFNVIAQFGIW 243
           A+ +W NGRG++ N    F +W
Sbjct: 204 ANRYWPNGRGIFHNEKKTFLVW 225


>Z49888-6|CAD44128.1|  428|Caenorhabditis elegans Hypothetical
           protein F47A4.1b protein.
          Length = 428

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +3

Query: 111 NGTGSNKNNHYNIQFDCLHLHSSFVFLVKWTWSLLQCYSTIWYLVF-SWHPFLL 269
           N + SNK   Y   +    L+ +F+F  +  W LLQ Y   +  VF SW PF L
Sbjct: 237 NFSTSNKFQLYAAGY-WSELNVNFLFRRRSGWYLLQGYIPTYMTVFISWIPFYL 289


>Z49888-5|CAA90065.2|  409|Caenorhabditis elegans Hypothetical
           protein F47A4.1a protein.
          Length = 409

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +3

Query: 111 NGTGSNKNNHYNIQFDCLHLHSSFVFLVKWTWSLLQCYSTIWYLVF-SWHPFLL 269
           N + SNK   Y   +    L+ +F+F  +  W LLQ Y   +  VF SW PF L
Sbjct: 218 NFSTSNKFQLYAAGY-WSELNVNFLFRRRSGWYLLQGYIPTYMTVFISWIPFYL 270


>Z47069-5|CAD44131.1|  428|Caenorhabditis elegans Hypothetical
           protein F47A4.1b protein.
          Length = 428

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +3

Query: 111 NGTGSNKNNHYNIQFDCLHLHSSFVFLVKWTWSLLQCYSTIWYLVF-SWHPFLL 269
           N + SNK   Y   +    L+ +F+F  +  W LLQ Y   +  VF SW PF L
Sbjct: 237 NFSTSNKFQLYAAGY-WSELNVNFLFRRRSGWYLLQGYIPTYMTVFISWIPFYL 289


>Z47069-4|CAA87339.2|  409|Caenorhabditis elegans Hypothetical
           protein F47A4.1a protein.
          Length = 409

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +3

Query: 111 NGTGSNKNNHYNIQFDCLHLHSSFVFLVKWTWSLLQCYSTIWYLVF-SWHPFLL 269
           N + SNK   Y   +    L+ +F+F  +  W LLQ Y   +  VF SW PF L
Sbjct: 218 NFSTSNKFQLYAAGY-WSELNVNFLFRRRSGWYLLQGYIPTYMTVFISWIPFYL 270


>U39849-10|AAA81054.3|  951|Caenorhabditis elegans Glutamate
           receptor family (ampa)protein 4 protein.
          Length = 951

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = +1

Query: 238 IWYSVGILFC---YLFHIVEKYHNWKWLRIEMIADVAF 342
           +W S+ I +C   Y  HI+ K+  ++W  +E I +  F
Sbjct: 534 VWISLLISYCIVSYSMHILAKFSPYEWYNLERIDERDF 571


>AF318608-1|AAK01096.1|  409|Caenorhabditis elegans ionotropic
           glutamate receptor GLR-4 protein.
          Length = 409

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = +1

Query: 238 IWYSVGILFC---YLFHIVEKYHNWKWLRIEMIADVAF 342
           +W S+ I +C   Y  HI+ K+  ++W  +E I +  F
Sbjct: 123 VWISLLISYCIVSYSMHILAKFSPYEWYNLERIDERDF 160


>AF077530-2|AAC26265.1|  436|Caenorhabditis elegans Hypothetical
           protein C40D2.2 protein.
          Length = 436

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +1

Query: 622 YLKYVPPNIHHNFHSSNTFTLNRQSGVCRRENF*YLLEHWEM 747
           YLKY+ PN +++F   +TF  N    V RR ++  L EH+ +
Sbjct: 136 YLKYLQPNSNNSFVLKHTFK-NISRLVERRSDYSDLEEHFNI 176


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,863,777
Number of Sequences: 27780
Number of extensions: 340545
Number of successful extensions: 873
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)