Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30450
(703 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC364.07 ||SPCC4G3.01|D-3 phosphoglycerate dehydrogenase |Schi... 99 3e-22
SPAC186.07c |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 69 9e-13
SPAC186.02c |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 66 6e-12
SPBC1773.17c ||SPBP26C9.01c|hydroxyacid dehydrogenase |Schizosac... 65 1e-11
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 62 7e-11
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 32 0.091
SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 30 0.28
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.37
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 0.85
SPAC23G3.12c |||serine protease |Schizosaccharomyces pombe|chr 1... 28 1.5
SPBC8D2.18c |||adenosylhomocysteinase |Schizosaccharomyces pombe... 27 2.6
SPBC725.11c |php2||CCAAT-binding factor complex subunit Php2 |Sc... 27 2.6
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 27 3.4
SPCC1259.06 |||transcription factor TFIID complex subunit 8 |Sch... 26 4.5
SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces p... 26 4.5
SPAP27G11.15 |slx1||structure-specific endonuclease catalytic su... 26 6.0
SPBP4H10.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 6.0
SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr 3|||Ma... 25 7.9
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 25 7.9
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 25 7.9
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 25 7.9
>SPCC364.07 ||SPCC4G3.01|D-3 phosphoglycerate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 466
Score = 99 bits (238), Expect = 3e-22
Identities = 54/168 (32%), Positives = 91/168 (54%), Gaps = 2/168 (1%)
Frame = +3
Query: 204 ALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACEL 383
A+ +RS T++T+ VL+A L V+G G + +D+D A ++G+ V N+P AN+ S EL
Sbjct: 100 AIGIRSKTRLTRRVLEAADSLIVIGCFCIGTNQVDLDFAAERGIAVFNSPYANSRSVAEL 159
Query: 384 TCRLMLVLARHVVPASTALKAGRWDRALYTGSELAGKTLAILGLGRVGREVATRMYAFGM 563
++ LAR V S L G W++ E+ GKTL I+G G +G +++ A G+
Sbjct: 160 VIGYIISLARQVGDRSLELHRGEWNKVSSGCWEIRGKTLGIIGYGHIGSQLSVLAEAMGL 219
Query: 564 NIIGFD--PFVSADQCAQFHCTXMELEDIWPLADYITLHTPLIESTRN 701
+++ +D P + Q L ++ AD+++LH P T+N
Sbjct: 220 HVVYYDILPIMPLGSAKQL----SSLPELLHRADFVSLHVPASPETKN 263
>SPAC186.07c |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 332
Score = 68.5 bits (160), Expect = 9e-13
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 1/146 (0%)
Frame = +3
Query: 267 KVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCRLMLVLARHVVPASTALKA 446
K++ AG +N+D+ +A G+ V+ P + + E T L+L L R + A ++
Sbjct: 70 KLIALRCAGFNNVDLKAAADNGITVVRVPAYSPYAVAEYTIGLLLSLNRKIHRAYVRVRE 129
Query: 447 GRWDRALYTGSELAGKTLAILGLGRVGREVATRM-YAFGMNIIGFDPFVSADQCAQFHCT 623
++ G +L GKT+ +LG GR+G VA + FG ++ D + +F
Sbjct: 130 DDFNLNGLLGHDLHGKTIGLLGTGRIGGLVAKCLKLGFGCEVLAHD-IKPNKELEKFGIQ 188
Query: 624 XMELEDIWPLADYITLHTPLIESTRN 701
+E +++ AD++ LH PL T +
Sbjct: 189 FVEQQEVLAKADFLCLHCPLTPDTEH 214
>SPAC186.02c |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 332
Score = 65.7 bits (153), Expect = 6e-12
Identities = 42/155 (27%), Positives = 82/155 (52%), Gaps = 2/155 (1%)
Frame = +3
Query: 237 KEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCRLMLVLARH 416
K + + GVKL V R G G +N+++ +A + + V++ P + + E T L+L L R
Sbjct: 62 KALAENGVKL-VALRCG-GYNNVNLKAASEYKITVVHVPSYSPFAVSEFTVGLLLSLNRK 119
Query: 417 VVPASTALKAGRWDRALYTGSELAGKTLAILGLGRVGREVATRM-YAFGMNIIGFDPFVS 593
+ A ++ ++ G ++ GKT+ ++G G++G VA FG +++ +D ++
Sbjct: 120 IHRAYVRVREDDFNIVGLLGCDIHGKTVGVIGTGKIGSNVAKCFKMGFGCDVLAYD--IN 177
Query: 594 ADQCAQ-FHCTXMELEDIWPLADYITLHTPLIEST 695
D+ + + +E ++ AD++ LH PL ST
Sbjct: 178 PDKKLENYGVQFVEQNEVLKKADFLCLHCPLTPST 212
>SPBC1773.17c ||SPBP26C9.01c|hydroxyacid dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 340
Score = 64.9 bits (151), Expect = 1e-11
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 1/148 (0%)
Frame = +3
Query: 261 KLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCRLMLVLARHVVPASTAL 440
KL V G AG +N+DVD A + GV V N P + L + R A +L
Sbjct: 85 KLFVTG--AAGYNNVDVDWATRNGVYVANTPNGPTEGTANMNLMLFMCTLRGAREAEQSL 142
Query: 441 KAGRWDRALYTGSELAGKTLAILGLGRVGREVATRMYAFGMNIIGFD-PFVSADQCAQFH 617
+ G+W + L + GK + I+G+G +G+ A ++ G I+ + + A++ +
Sbjct: 143 RLGKWRQNLSLTDDPYGKRVGIIGMGAIGKSFAQKILPLGCEIVYHNRNRLEAEEEKRLG 202
Query: 618 CTXMELEDIWPLADYITLHTPLIESTRN 701
+ + +++ +D I+++ PL +T +
Sbjct: 203 ASFVSFDELLSSSDVISINCPLTPATHD 230
>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 62.1 bits (144), Expect = 7e-11
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 1/156 (0%)
Frame = +3
Query: 237 KEVLD-AGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCRLMLVLAR 413
KE++D +K + GAG + +DV + +G+ V + P A + ++ LML R
Sbjct: 71 KEIIDNLPPSVKFICHLGAGYETVDVAACTARGIQVSHVPKAVDDATADVGIFLMLGALR 130
Query: 414 HVVPASTALKAGRWDRALYTGSELAGKTLAILGLGRVGREVATRMYAFGMNIIGFDPFVS 593
L W+ + GKTL ILGLG +G+ +A R AF M I+ +
Sbjct: 131 GFNQGIFELHKNNWNANCKPSHDPEGKTLGILGLGGIGKTMAKRARAFDMKIVYHNRTPL 190
Query: 594 ADQCAQFHCTXMELEDIWPLADYITLHTPLIESTRN 701
++ A+ + +D+ +D ++L+ PL TR+
Sbjct: 191 PEEEAE-GAEFVSFDDLLAKSDVLSLNLPLNAHTRH 225
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 31.9 bits (69), Expect = 0.091
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = -1
Query: 487 ASSLPVYRARSHLPAFSAVEAGTTWRARTNIKRQVSS--HALSALAPGALITPTPFLPAE 314
+SSLP + S P+ S++ TT +I + S H + P L P+ F+ A+
Sbjct: 116 SSSLPSIPSSSSTPSISSIPH-TTSSVSNDIPSVLGSSDHPIDLDNPEHLTPPSSFITAK 174
Query: 313 STSMLSTPAPARPTTFSFTPASNTS 239
S L TP P P + S P S
Sbjct: 175 QLSRLPTPLP--PPSSSSLPTGTIS 197
>SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 867
Score = 30.3 bits (65), Expect = 0.28
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 472 VYRARSHLPAFSAVEAGTTWRARTNIKRQVSSHALSALAPGA 347
+ R R HL + A E T WR ++R+ + LS L P A
Sbjct: 334 IRRLRGHLREYVAWERNTIWREMMAMERRTQAARLSGLKPVA 375
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.9 bits (64), Expect = 0.37
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -1
Query: 349 ALITP-TPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRAS 200
+L TP TP +P STS S P P PT+ S T +++ L T TT S
Sbjct: 186 SLSTPITPTVPPTSTSSTSIPIP--PTSTSSTDTNSSPLPTTSTSCTTSTS 234
Score = 29.9 bits (64), Expect = 0.37
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 352 GALITP-TPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRAS 200
G TP TP +P STS STP P P + S T S++ L++ TT S
Sbjct: 349 GNSTTPVTPTVPPTSTSSTSTPPP--PASTSSTGTSSSPLLSTSTSCTTSTS 398
Score = 29.5 bits (63), Expect = 0.49
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -1
Query: 349 ALITP-TPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRAS 200
+L TP TP +P STS S P P PT+ S T ++ L T TT S
Sbjct: 129 SLSTPITPTVPPTSTSSTSIPIP--PTSTSSTDTNSNPLPTTSTSCTTSTS 177
Score = 29.5 bits (63), Expect = 0.49
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Frame = -1
Query: 538 ATSRPTLPRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNIKRQVSSHALSAL 359
+TS PT ++ + + P + + +P + T + S +++
Sbjct: 232 STSIPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSI 291
Query: 358 AP-GALITP-TPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRAS 200
P G TP TP +P STS STP P P + S T S++ L + TT S
Sbjct: 292 PPTGNSTTPVTPTVPPTSTSSTSTPPP--PASTSSTGTSSSPLPSTSTSCTTSTS 344
Score = 25.4 bits (53), Expect = 7.9
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = -1
Query: 367 SALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRAS 200
S L +T TP T+ S P + P T S S+++ VT TT +
Sbjct: 537 SVLYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTNCT 592
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 28.7 bits (61), Expect = 0.85
Identities = 24/104 (23%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Frame = -1
Query: 547 ILVATSRPTLPRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNIKRQVS---S 377
I+V++ T+ +P RV + + + P S + + + ++++ Q S S
Sbjct: 427 IIVSSYVSTVTQPASTRVQTTTVSSISTSVKQ-PTASVASSSVSVPSSSSVQPQSSTPIS 485
Query: 376 HALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASN 245
+ SA +P + ++ + + +E +S L + + A P+T S TP+S+
Sbjct: 486 SSSSASSPQSTLSTSSEVVSEVSSTLLSGSSAIPSTSSSTPSSS 529
>SPAC23G3.12c |||serine protease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 996
Score = 27.9 bits (59), Expect = 1.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 605 ALISRHERVESDDVHAEGVHPSGHLAADPAKAK 507
A+ HE VE V+ + VH G L DP K +
Sbjct: 112 AVFDNHEEVEVFPVYRDPVHDFGFLRFDPKKIR 144
>SPBC8D2.18c |||adenosylhomocysteinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 27.1 bits (57), Expect = 2.6
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +3
Query: 483 LAGKTLAILGLGRVGREVATRMYAFGMNII--GFDPFVSADQCAQ--FHCTXME 632
+AGK + G G VG+ +T + + G +I DP ++A Q A F T ME
Sbjct: 212 IAGKVAVVAGFGDVGKGCSTSLRSQGARVIVTEVDP-INALQAAMDGFEVTTME 264
>SPBC725.11c |php2||CCAAT-binding factor complex subunit Php2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 334
Score = 27.1 bits (57), Expect = 2.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 322 PAESTSMLSTPAPARPTTFSFTPASNTS 239
P+ ++ +PAP T S +PA+NTS
Sbjct: 125 PSSISNSSESPAPINSATASMSPANNTS 152
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = -1
Query: 373 ALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTR 206
++SAL+ + + PT + S S PAP P + S +P ++ V +R
Sbjct: 229 SVSALSSSSHLQPTSATSSSSRLYPSRPAPTPPASSSSSPLLSSQTVKTTTSNASR 284
>SPCC1259.06 |||transcription factor TFIID complex subunit 8
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 222
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -1
Query: 397 IKRQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTT 269
+ + + S A+S P ++ P PA T M + P RPT+
Sbjct: 113 VSQLLGSLAVSQNRPAYVVNHLPPFPASHTYMATPVYPVRPTS 155
>SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 584
Score = 26.2 bits (55), Expect = 4.5
Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Frame = -3
Query: 524 DPAKAKDGEGLASELAASVQSPVPP------ASLQRSGSWDHVASQNQHQTAGQLARAQR 363
DP+K+KDG L S V P PP A+LQ H A+ Q++ Q A
Sbjct: 293 DPSKSKDGLNLGS--LTDVVPPQPPQPEHELAALQEHNE-AHDAAMRQYELERQ-QNAML 348
Query: 362 IGARSVDHSDAL 327
G S+D AL
Sbjct: 349 PGLASIDGLQAL 360
>SPAP27G11.15 |slx1||structure-specific endonuclease catalytic
subunit |Schizosaccharomyces pombe|chr 1|||Manual
Length = 271
Score = 25.8 bits (54), Expect = 6.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 610 SSIAPRWSWRTFGL*RTTSPCTLRS 684
S++ W+W+ G+ R T C RS
Sbjct: 69 SALKFEWNWQNLGISRYTKDCDFRS 93
>SPBP4H10.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 308
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/65 (23%), Positives = 29/65 (44%)
Frame = -1
Query: 679 GVCRVM*SARGQMSSSSIXVQWNWAH*SADTKGSNPMMFMPKAYILVATSRPTLPRPRMA 500
G C ++ S +S++S +W++ ++T + + +V R LP RM
Sbjct: 117 GQCAILDSQNFTLSNASTKSKWSFTKHGSNTPSDSSSPLCNSSKRVVGMLRRFLPSSRMV 176
Query: 499 RVLPA 485
R+ A
Sbjct: 177 RLSKA 181
>SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr
3|||Manual
Length = 462
Score = 25.4 bits (53), Expect = 7.9
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = -1
Query: 391 RQVSSH--ALSALAPGALITPTPFLPAESTSMLSTPA 287
R +SH +LS + P + +P+P A STS+ S PA
Sbjct: 24 RWSTSHIPSLSEINPSSFQSPSPSPFASSTSLASKPA 60
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +3
Query: 222 ATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAP 353
+TQ+ + +K + + A +D+I DS G G +N+P
Sbjct: 678 STQIGSVGMGKKQAVKELRKLQAKIDSIIADSMSPMGTGAVNSP 721
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 25.4 bits (53), Expect = 7.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -1
Query: 526 PTLPRPRMARVLPASSLPVYRARSHLPAFSAVE 428
P PR PA+ +PV +R H P S ++
Sbjct: 91 PQKSPPRQKHTAPATPIPVSASRHHKPHHSGLK 123
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 343 ITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLV 233
+TPTP A T+ + A +T S T + TS+V
Sbjct: 34 VTPTPLPSANVTTTSFSSASTETSTHSVTSTNITSIV 70
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,698,305
Number of Sequences: 5004
Number of extensions: 51896
Number of successful extensions: 201
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 325165428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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