Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30450
(703 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31364| Best HMM Match : 2-Hacid_dh_C (HMM E-Value=1.5e-39) 101 7e-22
SB_36985| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_12714| Best HMM Match : 2-Hacid_dh (HMM E-Value=2.6e-12) 74 1e-13
SB_36986| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 9e-12
SB_7265| Best HMM Match : 2-Hacid_dh (HMM E-Value=0.00052) 59 3e-09
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05) 32 0.39
SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_51462| Best HMM Match : Ion_trans_2 (HMM E-Value=2.3e-15) 31 0.90
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 30 2.1
SB_33399| Best HMM Match : Ank (HMM E-Value=0) 30 2.1
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 30 2.1
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 29 3.6
SB_2661| Best HMM Match : EGF_CA (HMM E-Value=0.0062) 29 3.6
SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29) 29 4.8
SB_21812| Best HMM Match : GRASP55_65 (HMM E-Value=2.3) 29 4.8
SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69) 29 4.8
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 28 6.4
SB_27955| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_43283| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_5193| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_50132| Best HMM Match : Hydrophobin (HMM E-Value=6.1) 28 8.4
SB_45345| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_23444| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6) 28 8.4
SB_51986| Best HMM Match : HLH (HMM E-Value=0.15) 28 8.4
SB_45977| Best HMM Match : MBT (HMM E-Value=0) 28 8.4
SB_1163| Best HMM Match : DMA (HMM E-Value=1.4e-11) 28 8.4
>SB_31364| Best HMM Match : 2-Hacid_dh_C (HMM E-Value=1.5e-39)
Length = 401
Score = 101 bits (241), Expect = 7e-22
Identities = 45/77 (58%), Positives = 57/77 (74%)
Frame = +3
Query: 468 YTGSELAGKTLAILGLGRVGREVATRMYAFGMNIIGFDPFVSADQCAQFHCTXMELEDIW 647
+ G+EL GKTLAI+GLGR+GREVA RM ++G+ IG+DP VS A+ + ME E IW
Sbjct: 1 FMGNELFGKTLAIIGLGRIGREVALRMQSYGVKTIGYDPLVSPQDAAESNIEWMETEKIW 60
Query: 648 PLADYITLHTPLIESTR 698
PLADYIT+H PLI T+
Sbjct: 61 PLADYITVHVPLIPPTK 77
>SB_36985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 77.4 bits (182), Expect = 1e-14
Identities = 49/163 (30%), Positives = 90/163 (55%), Gaps = 6/163 (3%)
Frame = +3
Query: 231 VTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCRLMLVLA 410
+T+E++ + LKV+ GAG+DNID+++A ++G+ V N PG + A + L++ A
Sbjct: 62 ITEELMASLPNLKVISNIGAGIDNIDLEAAKRRGILVGNTPGISDCLA-DFAWALLMAAA 120
Query: 411 RHVVPASTAL-KAGRWDRAL--YTGSELAGKTLAILGLGRVGREVATRMYAFGMNIIGFD 581
R+V+ A + K G ++ + G+ ++G TL I+GLG +G VA R F M I+ ++
Sbjct: 121 RNVIQADAMMRKPGFKIPSIINWHGTRVSGATLGIIGLGNIGLAVAKRAKGFDMRILYYN 180
Query: 582 ---PFVSADQCAQFHCTXMELEDIWPLADYITLHTPLIESTRN 701
+ + +C+ L+D+ +DY+ L L T++
Sbjct: 181 RTRKMKAESELGVHYCSG--LKDLLKESDYVMLSCALTPETKH 221
>SB_12714| Best HMM Match : 2-Hacid_dh (HMM E-Value=2.6e-12)
Length = 189
Score = 74.1 bits (174), Expect = 1e-13
Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Frame = +3
Query: 231 VTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCRLMLVLA 410
V+ +LD LKV+ GAG D ID+ +A K+G+ V N PG ++ L+L A
Sbjct: 58 VSNSLLDDLPSLKVISSIGAGFDRIDIPAATKRGIRVGNTPGVVQDCTADMAIGLLLASA 117
Query: 411 RHVVPA-STALKAGRWDRALYT--GSELAGKTLAILGLGRVGREVATRMYAFGMNII 572
RH+V + K G +++ G+ + G TL I+GLG VG VA R F M I+
Sbjct: 118 RHIVTGDANTRKPGFTKESIFNCFGTRVTGSTLGIVGLGAVGSAVAMRAKGFKMRIL 174
>SB_36986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 67.7 bits (158), Expect = 9e-12
Identities = 46/163 (28%), Positives = 83/163 (50%), Gaps = 6/163 (3%)
Frame = +3
Query: 231 VTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCRLMLVLA 410
V ++D +L+V+ AG GVD+ID+ +A +G+ V N PG + L+L A
Sbjct: 59 VDSALMDCYPELRVISSAGVGVDHIDLAAATIRGIRVGNTPGVVQECTADHAIGLLLASA 118
Query: 411 RHVVPASTALK-AGRWDRALYT--GSELAGKTLAILGLGRVGREVATRMYAFGMNIIGFD 581
R + + ++ G +++ G+++ G TL I+GLG VG VA R F M I+ +
Sbjct: 119 RKICSGDSVIRQPGFSKESIFNSFGTKVTGSTLGIVGLGGVGSAVANRAKGFKMRILYHN 178
Query: 582 PFVSAD---QCAQFHCTXMELEDIWPLADYITLHTPLIESTRN 701
D + +C+ +L+++ +D++ L L + TR+
Sbjct: 179 RTRKEDKELETGAEYCS--KLDELLKESDFVVLCCALTDETRH 219
>SB_7265| Best HMM Match : 2-Hacid_dh (HMM E-Value=0.00052)
Length = 126
Score = 59.3 bits (137), Expect = 3e-09
Identities = 27/49 (55%), Positives = 38/49 (77%)
Frame = +3
Query: 198 HDALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVI 344
+D L+VRSAT+V+++V+ AG LK++GRAG GVDNID +A GV V+
Sbjct: 77 YDGLIVRSATKVSEDVIKAGKNLKIIGRAGTGVDNIDTVAASLHGVLVM 125
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 65 VDIKSVLIVDGVGAKCAELLNAYGIATTTKAKISKE 172
+++K VLI D V + C +L G+ K+SKE
Sbjct: 4 LELKRVLISDSVDSCCKTILERNGVTVDVNTKLSKE 39
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 32.3 bits (70), Expect = 0.39
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 340 TPTPFLPAESTSMLSTPAPARPTTFSFTPASNT 242
TP+P P ++T +TP P PT + TP ++T
Sbjct: 58 TPSPTAPTQTTPTPATPTPTTPTPKTPTPTTST 90
Score = 31.9 bits (69), Expect = 0.52
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 340 TPTPFLPAESTSMLSTPAPARPTTFSFTPASNT 242
TPT P ++T +TP+P PT + TPA+ T
Sbjct: 43 TPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPT 75
Score = 31.9 bits (69), Expect = 0.52
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 340 TPTPFLPAESTSMLSTPAPARPTTFSFTPASNT 242
TPTP P+ + +TP PA PT + TP + T
Sbjct: 53 TPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPT 85
Score = 31.9 bits (69), Expect = 0.52
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -1
Query: 340 TPTPFLPAESTSMLSTPAPA-RPTTFSFTPASNT 242
TPTP P +TS L+ P PA PT TP ++T
Sbjct: 78 TPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHT 111
Score = 28.7 bits (61), Expect = 4.8
Identities = 24/93 (25%), Positives = 35/93 (37%)
Frame = -1
Query: 526 PTLPRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNIKRQVSSHALSALAPGA 347
PTL P + + P ++ P + + TT + + + S AP
Sbjct: 8 PTLTTPTLTKATPQTT-PTPTKPTPTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAP-T 65
Query: 346 LITPTPFLPAESTSMLSTPAPARPTTFSFTPAS 248
TPTP P +T TP P T TPA+
Sbjct: 66 QTTPTPATPTPTTPTPKTPTPTTSTLTKPTPAT 98
Score = 27.9 bits (59), Expect = 8.4
Identities = 23/99 (23%), Positives = 30/99 (30%), Gaps = 1/99 (1%)
Frame = -1
Query: 535 TSRPTLPRPRM-ARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNIKRQVSSHALSAL 359
T PT P P P + P S T T + + +
Sbjct: 33 THTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLT 92
Query: 358 APGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNT 242
P TPTP P + +TP P T TP + T
Sbjct: 93 KPTPATTPTPTKPTPTAHTPTTPTPTAHTPTKPTPKTPT 131
>SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05)
Length = 819
Score = 32.3 bits (70), Expect = 0.39
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -1
Query: 382 SSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTT 269
SS +++ +L TP+ P+ ST LSTP P++P+T
Sbjct: 196 SSSSITTTKLSSLSTPSLSTPSLSTPSLSTPLPSKPST 233
>SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1240
Score = 31.5 bits (68), Expect = 0.68
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = -1
Query: 433 VEAGTTWRARTNIKRQVSSHALSAL-APGALITPTPFLPAES--TSMLSTPAPARPTTFS 263
V A T+ + K Q +++ +S + AP A + PT PA++ T STPA + T
Sbjct: 689 VFANTSQSNKAADKVQSATNVVSVMSAPPAYVPPTSAPPAQTQVTDTYSTPAQTQVTDTY 748
Query: 262 FTPASNT 242
TPA T
Sbjct: 749 STPAQTT 755
>SB_51462| Best HMM Match : Ion_trans_2 (HMM E-Value=2.3e-15)
Length = 930
Score = 31.1 bits (67), Expect = 0.90
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = -3
Query: 668 GDVVR*RPNVLQLHLGAMELGALISRHERVESDDVHAEGVHPSGHLAADPAKAKDGEGLA 489
G VVR P VL +H G LG + R + GV+ + DP D +A
Sbjct: 277 GTVVRGNPRVLLVHRG--RLGTVAGRSPALSEKASDCVGVNTKSNKNVDPCSWSDVSRMA 334
Query: 488 SELAA 474
++L A
Sbjct: 335 ADLCA 339
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 29.9 bits (64), Expect = 2.1
Identities = 29/114 (25%), Positives = 48/114 (42%)
Frame = -1
Query: 541 VATSRPTLPRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNIKRQVSSHALSA 362
VA LP + SS ++L + S V T+ + + + S
Sbjct: 1100 VAPGTTVLPESTVTPGTTVSSESTATPLTNLASESTVTLETSISSEGTFAPRTTLAHKST 1159
Query: 361 LAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRAS 200
+APG ++P + EST ++T + A P T + + S L+T A +T AS
Sbjct: 1160 VAPGTTVSPESTVQPEST--IATVSSAAPET-TESSESTAELLTAAASESTVAS 1210
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/79 (25%), Positives = 34/79 (43%)
Frame = -1
Query: 439 SAVEAGTTWRARTNIKRQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSF 260
+ V A +T T + + ++ A + +AP P L ++T T A A T +
Sbjct: 223 TTVAAESTDAPDTTVAAETTASAETTVAPETTAAPDTTLVPDTTVAAETTAAAETTETTA 282
Query: 259 TPASNTSLVT*VAERTTRA 203
PA+ + T + TT A
Sbjct: 283 VPATTDAPATNLPPETTAA 301
Score = 29.5 bits (63), Expect = 2.8
Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 9/142 (6%)
Frame = -1
Query: 598 SADTKGSNPMMFMPKAYILVATSRPTLPRPRMARVLPASSLPVYRARSHLPAFSAVEAGT 419
+A+T S P+ A +P +A A++ A + + V A T
Sbjct: 136 AAETTASAETTVAPQT--TAAPDTALVPDTTVAAETTAAAETTVAAETIAAPDTTVAAET 193
Query: 418 TWRARTNIKRQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFS-------F 260
T A T + + + + +AP + P + AEST T A T +
Sbjct: 194 TASAETTVAPETTLAPETTMAPETTMAPETTVAAESTDAPDTTVAAETTASAETTVAPET 253
Query: 259 TPASNTSLV--T*VAERTTRAS 200
T A +T+LV T VA TT A+
Sbjct: 254 TAAPDTTLVPDTTVAAETTAAA 275
>SB_33399| Best HMM Match : Ank (HMM E-Value=0)
Length = 1416
Score = 29.9 bits (64), Expect = 2.1
Identities = 32/112 (28%), Positives = 48/112 (42%)
Frame = -1
Query: 574 PMMFMPKAYILVATSRPTLPRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNI 395
P + MP + ++ +S PT ++ V S ++ SH F+ + TN
Sbjct: 1142 PNVAMPASTVVNTSSLPTAFSNLLSHVSQTLSPSIWNNISHPSTFNPDMP----KPSTN- 1196
Query: 394 KRQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTS 239
S L PGAL TP P +TS T A PTT TP++++S
Sbjct: 1197 -NDPVSQPLFITTPGALFTPLPH-ETSATSPPYTSASPVPTT---TPSASSS 1243
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/79 (25%), Positives = 34/79 (43%)
Frame = -1
Query: 439 SAVEAGTTWRARTNIKRQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSF 260
+ V A +T T + + ++ A + +AP P L ++T T A A T +
Sbjct: 2036 TTVAAESTDAPDTTVAAETTASAETTVAPETTAAPDTTLVPDTTVAAETTAAAETTETTA 2095
Query: 259 TPASNTSLVT*VAERTTRA 203
PA+ + T + TT A
Sbjct: 2096 VPATTDAPATNLPPETTAA 2114
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/92 (22%), Positives = 35/92 (38%)
Frame = -1
Query: 529 RPTLPRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNIKRQVSSHALSALAPG 350
+P P P + P+ S P+ + ++ + + T IK S+ +
Sbjct: 1253 KPIKPSPSTTPIKPSPSTTSTTPIKPSPSTNPIKPSPSTTSTTPIKPSPSTTPIKPSPST 1312
Query: 349 ALITPTPFLPAESTSMLSTPAPARPTTFSFTP 254
I P+P S +TP P+T S TP
Sbjct: 1313 TPIKPSPSTTPIKPSPSTTPIKPSPSTTSTTP 1344
>SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 799
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = -1
Query: 529 RPTLPRPR----MARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNIKRQVSSHALSA 362
R ++PR R R+ P RA L A +A AGT +R++ ++S + +
Sbjct: 546 RISVPRRRAGSAQGRITTKKKTPPRRANL-LEALTAAAAGTPAASRSSSSVSLASPGMRS 604
Query: 361 LAPGALITPTPFLPAESTSMLSTPAPAR 278
+TP F P S S + P +
Sbjct: 605 SLGSLQLTPPSFTPRSSISRRRSDTPTK 632
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 29.1 bits (62), Expect = 3.6
Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 1/104 (0%)
Frame = -1
Query: 541 VATSRPTLPRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNIKRQVSSHALSA 362
VA P +A + A+ S + + V TT + T + + ++ + +
Sbjct: 446 VAPETTAAPESTLAPEITAAPDTTMVPESTVAPETTVAPETTVASETTVAPKTTAASEAT 505
Query: 361 LAPGALITPTPFLPAESTSML-STPAPARPTTFSFTPASNTSLV 233
LAP + P EST L +T AP T A +T +V
Sbjct: 506 LAPETTVAPETTAAPESTLALETTAAPVTTVAPETTAAPDTPIV 549
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
Frame = -1
Query: 541 VATSRPTLPRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNIKRQVSSHALSA 362
VA P +A + + + L + V TT + + + ++ ++
Sbjct: 476 VAPETTVAPETTVASETTVAPKTTAASEATLAPETTVAPETTAAPESTLALETTAAPVTT 535
Query: 361 LAPGALITP-TPFLPAESTSMLSTPAPARPTTFSFTPASNTS 239
+AP P TP +P + ++ ST AP TPA T+
Sbjct: 536 VAPETTAAPDTPIVPETTVALESTVAPEITVVPETTPALETT 577
>SB_2661| Best HMM Match : EGF_CA (HMM E-Value=0.0062)
Length = 87
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +3
Query: 228 QVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCR 392
++T++ +D K K+ A A VD G +N PG+ AC +C+
Sbjct: 5 EITRKFVDYAEKAKLRASAQAHVDECQEVDKCSGGEYCVNEPGSFRCEACHESCK 59
>SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29)
Length = 1202
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -2
Query: 273 PPSASRLRPTPLWSLELLNAQPERRGWVSP 184
PP + +LRP+P SL ++NA G SP
Sbjct: 1006 PPVSKKLRPSPPDSLPIMNAGTPSSGHFSP 1035
>SB_21812| Best HMM Match : GRASP55_65 (HMM E-Value=2.3)
Length = 660
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -1
Query: 337 PTPFLPAESTSMLSTPAPARPTTFSFTPASNTS 239
P P ST +STP R T SFTP S+ S
Sbjct: 453 PPTLSPLASTQPVSTPRQQRRTPPSFTPRSSIS 485
>SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69)
Length = 404
Score = 28.7 bits (61), Expect = 4.8
Identities = 35/118 (29%), Positives = 48/118 (40%), Gaps = 13/118 (11%)
Frame = -1
Query: 523 TLPRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNIKRQVSSHALSAL----- 359
T+ R R A L A ++ + S A + R+ + + S A SA
Sbjct: 147 TMLRKRTLAATMAHRLSTSEAHYNIQSKSKTSAARSSVIRSLMSAEASLTAASAAPVTPT 206
Query: 358 -APGALITPT-----PFLPAESTSMLSTP--APARPTTFSFTPASNTSLVT*VAERTT 209
AP A +TPT P P + + TP APA P T + PA+ VT A R T
Sbjct: 207 AAPAAPVTPTAAPAAPVTPTAAPAARVTPTAAPAAPVTPTAAPAAR---VTPTAARVT 261
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = -2
Query: 462 PGPTCQPSAQWKLGPRGEPEPTSNGRSARTRSAHWRP 352
PGP P LGP GE P N + H P
Sbjct: 643 PGPKGPPGPNGPLGPPGESGPAGNAGGVGYQGNHGNP 679
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = -2
Query: 462 PGPTCQPSAQWKLGPRGEPEPTSNGRSARTRSAHWRP 352
PGP P LGP GE P N + H P
Sbjct: 728 PGPNGPPGPNGPLGPPGECGPAGNAGGVGCQGHHGNP 764
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = -2
Query: 462 PGPTCQPSAQWKLGPRGEPEPTSNGRSARTRSAHWRP 352
PGP P LGP GE P N + H P
Sbjct: 813 PGPKGPPGPNGPLGPPGECGPAGNAGGVGCQGNHGNP 849
>SB_27955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 331 PFLPAESTSMLSTPAPARPTTFSFTPASN 245
P P+ ++ TP PT F FTP +N
Sbjct: 444 PVTPSSGSTTRQTPNSIEPTRFHFTPITN 472
>SB_43283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 340 TPTPFLPAESTSMLSTPAPARPTTFSF-TPASNTSLVT*VAERTT 209
TPT P ++T + +TP A PT TP TS T + T+
Sbjct: 219 TPTASPPVKTTPLAATPVYATPTAPELTTPLDTTSTATTPVDTTS 263
>SB_5193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 385 VSSHALSALAPGALITPTPFLPAESTSML 299
+S H L LA G PTP +PA + S+L
Sbjct: 163 LSPHELRLLAKGLKFIPTPPIPASNKSLL 191
>SB_50132| Best HMM Match : Hydrophobin (HMM E-Value=6.1)
Length = 114
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Frame = -1
Query: 382 SSHALSALAPG---ALITPTPFLP-AESTSMLSTPAPARPTT 269
S +A +A+A G A +TP+ P A STS + + A ARPTT
Sbjct: 22 SINATTAIATGTFSATVTPSKTSPVAMSTSAVFSTAAARPTT 63
>SB_45345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2346
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -1
Query: 592 DTKGSNPMMFMPKAYILVATSRPTLPRPRMARVLPASSLPVYRARSHLP 446
DT+ NP ++P + + S LP PR+ LP LP +R LP
Sbjct: 1318 DTRNDNPANYVPPWELPLPPSGLPLPLPRLP--LPPLRLPPPHSRLPLP 1364
>SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1717
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/59 (27%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Frame = -2
Query: 642 CPPAPSXCNGTGRTDQQTXXXXXXXXXXXXXXXXXXXRGRP-CQGQGWRGSCQRARCQC 469
CP CNG G + + G P C GQG + RCQC
Sbjct: 1555 CPGRDGNCNGNGFCNLKLQKCECYPGWAGDACDKLDCPGSPPCSGQGECSNTNPRRCQC 1613
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 362 CAERVRADLPFDVGSGSPRGPSFHCAEGWQV 454
C ER P D +G+P P ++C G+ +
Sbjct: 1493 CIERASVPNPNDTMTGAPCPPGYYCNSGFHI 1523
>SB_23444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = -3
Query: 629 HLGAMELGALISRHERVESDDVHAEGVHPSGHLAADPAKAKDGEGLASELAASVQSPVPP 450
H G +E G +++ R+ A V S +A P++ + EGL ++ A +PVP
Sbjct: 54 HPGRVEAGRRLAKWNRINRAKKEALRVVQSP-VAPGPSEPQGREGLRADDAFGTHTPVPE 112
Query: 449 ASLQRSGS 426
++ S S
Sbjct: 113 SNSAWSAS 120
>SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6)
Length = 156
Score = 27.9 bits (59), Expect = 8.4
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -1
Query: 418 TWRARTNIKRQV-SSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNT 242
T AR+++ R + S+ A A A +TPT A + + T APA P T + PA+
Sbjct: 20 TSAARSSVIRSLMSAEASLTAASAAPVTPT---AAPAAPVTPTAAPAAPVTPTAAPAARV 76
Query: 241 S 239
+
Sbjct: 77 T 77
>SB_51986| Best HMM Match : HLH (HMM E-Value=0.15)
Length = 2110
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = -1
Query: 406 RTNIKRQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPAS 248
+T+ + +H+ +A LI P+P + + + +TP T F PAS
Sbjct: 1743 QTSTQNVPGTHSKAASTTYQLIVPSPAIAPVQSQLATTPGQVGNTNTLFRPAS 1795
>SB_45977| Best HMM Match : MBT (HMM E-Value=0)
Length = 1198
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -2
Query: 477 CQCTEPGPTCQPSAQWKLGPRGEPEPTSNGRSARTRS 367
C TEP P Q S+ K PE +++ S T S
Sbjct: 168 CSTTEPAPQDQVSSSCKTTETSRPETSTSATSEETNS 204
>SB_1163| Best HMM Match : DMA (HMM E-Value=1.4e-11)
Length = 403
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = -1
Query: 376 HALSALAPGALITPTPFLPAESTSMLSTPAPARP 275
HA A AP + P P PA STS + TP+P P
Sbjct: 304 HAPIARAP--IARPLPTSPACSTSRIYTPSPLPP 335
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,843,152
Number of Sequences: 59808
Number of extensions: 483528
Number of successful extensions: 1887
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1867
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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