Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30448
         (736 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73906-2|CAA98115.1|  586|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AF101316-2|AAC69230.1|  692|Caenorhabditis elegans Hypothetical ...    29   4.5  
AF047662-7|AAC04439.1|  955|Caenorhabditis elegans Hypothetical ...    28   7.9  

>Z73906-2|CAA98115.1|  586|Caenorhabditis elegans Hypothetical
           protein D2030.2a protein.
          Length = 586

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 382 KFIKCNFMSKIYFCNYFSQIAGQG 453
           ++I C+  +K+YF NYF   A  G
Sbjct: 93  RYIHCDSCNKLYFANYFEDSAKNG 116


>AF101316-2|AAC69230.1|  692|Caenorhabditis elegans Hypothetical
           protein F52F10.4 protein.
          Length = 692

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 674 FAAKLARMVVTLVLRLILYY*HRYFRL 594
           F  KL +  +T  +  IL+Y HRY RL
Sbjct: 312 FKTKLTKKTITSPMTWILFYVHRYLRL 338


>AF047662-7|AAC04439.1|  955|Caenorhabditis elegans Hypothetical
           protein T22B2.1 protein.
          Length = 955

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 398 LHFMNFCSKFFRYFVDRCFSKKKPQI 321
           +H    CS+ F Y   +CF  K+P++
Sbjct: 514 IHSQLVCSRIFGYQCQKCFQPKEPKV 539


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,932,152
Number of Sequences: 27780
Number of extensions: 278908
Number of successful extensions: 555
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)