Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30448
         (736 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    23   3.9  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   3.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   3.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   3.9  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   5.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   9.1  

>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +1

Query: 358 KYRKNLEQKFIKCNFMSKIYFCNYFSQI 441
           KY  N +  +   N+  K+Y+ NY   I
Sbjct: 97  KYNYNNKYNYNNNNYNKKLYYKNYIINI 124


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 541 QRLPQTHANSCTLC 582
           +RL +T++N C LC
Sbjct: 209 RRLKETYSNMCALC 222


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 541 QRLPQTHANSCTLC 582
           +RL +T++N C LC
Sbjct: 209 RRLKETYSNMCALC 222


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 541 QRLPQTHANSCTLC 582
           +RL +T++N C LC
Sbjct: 209 RRLKETYSNMCALC 222


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +1

Query: 397 NFMSKIYFCNYFSQIAGQ-G*QSSMLL 474
           N M  I FC  F  +AGQ G Q  +++
Sbjct: 239 NVMGMIVFCITFGLVAGQFGAQGKLIV 265


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 559 HANSCTLCAHSSNLKYR 609
           H++SC LC  S N   R
Sbjct: 351 HSDSCCLCLDSMNAVIR 367


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,633
Number of Sequences: 438
Number of extensions: 3845
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)