Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30446
         (434 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g17520.1 68415.m02026 protein kinase family protein / Ire1 ho...    32   0.19 
At2g25660.1 68415.m03075 expressed protein                             28   2.4  

>At2g17520.1 68415.m02026 protein kinase family protein / Ire1
           homolog-2 (IRE1-2) contains protein kinase domain,
           Pfam:PF00069; identical to Ire1 homolog-2 [Arabidopsis
           thaliana] GI:15277139, cDNA Ire1 homolog-2 GI:15277138
          Length = 841

 Score = 31.9 bits (69), Expect = 0.19
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = -1

Query: 422 TSITNEFCFPCATEDFQNENHLLRFTNKRL 333
           T ITN    P +TEDF NE  L+R T+ +L
Sbjct: 179 TKITNALVKPASTEDFVNEPLLIRRTDSKL 208


>At2g25660.1 68415.m03075 expressed protein 
          Length = 2146

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = -2

Query: 394 HVLLKTFKMKTIYFVLLISVCAV 326
           + L+KTFKMK ++F L  SV AV
Sbjct: 788 NALMKTFKMKPLFFPLAGSVTAV 810


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,225,651
Number of Sequences: 28952
Number of extensions: 51763
Number of successful extensions: 135
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 135
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 683042040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)