Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30442
         (718 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q26F27 Cluster: Vitamin K-dependent gamma-glutamyl carb...    33   7.0  
UniRef50_Q21041 Cluster: Putative uncharacterized protein ver-4;...    33   7.0  

>UniRef50_Q26F27 Cluster: Vitamin K-dependent gamma-glutamyl
           carboxylase; n=8; Bacteroidetes|Rep: Vitamin K-dependent
           gamma-glutamyl carboxylase - Flavobacteria bacterium
           BBFL7
          Length = 460

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = -2

Query: 237 TFFSNHYETQNFLNKLLCFSVNNYHCSLKFMHTFNPLSFSPDLYKW 100
           T + NHY   + L+ L+ F  +N + S+ + HT   LS  P + +W
Sbjct: 108 TTYLNHYYFISILSFLMIFLPSNRYFSIDYYHTNKSLSAVPSIPRW 153


>UniRef50_Q21041 Cluster: Putative uncharacterized protein ver-4;
           n=1; Caenorhabditis elegans|Rep: Putative
           uncharacterized protein ver-4 - Caenorhabditis elegans
          Length = 1199

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 21/57 (36%), Positives = 31/57 (54%)
 Frame = -1

Query: 580 FYNNNKKKSNLT*YSGFIHTFFPSVFIILHKKASRFH*YNIKKRRTKTNSISLTSKA 410
           FY N  +K + T   GFI+ F      +L K+   F   N+KK++T T  I++TS A
Sbjct: 521 FYKNKLRKIDDTFEKGFIYNF------VLAKRTD-FKCINVKKKKTSTKFITVTSNA 570


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,940,610
Number of Sequences: 1657284
Number of extensions: 12819664
Number of successful extensions: 26151
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26146
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)