Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30442
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.81 
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    23   3.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   3.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.3  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   5.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   5.7  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   5.7  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   5.7  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +1

Query: 376 FLFCQIITLVHALWTLAKLNLFS 444
           FLF Q  T V  L TL+ LNL S
Sbjct: 467 FLFTQKFTFVAGLATLSVLNLLS 489



 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 516 FLQSLLYYTKRRHVFIN 466
           FL SLL   KRR+V +N
Sbjct: 580 FLMSLLQSIKRRYVLLN 596


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 321 TLSIKPPEVNQSHYGRRSLSFLP 389
           T+ ++PP+V  + YG R +  LP
Sbjct: 80  TVRVRPPKVYPTPYGGRLVWTLP 102


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 321 TLSIKPPEVNQSHYGRRSLSFLP 389
           T+ ++PP+V  + YG R +  LP
Sbjct: 394 TVRVRPPKVYPTPYGGRLVWTLP 416


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 321 TLSIKPPEVNQSHYGRRSLSFLP 389
           T+ ++PP+V  + YG R +  LP
Sbjct: 627 TVRVRPPKVYPTPYGGRLVWTLP 649


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 321 TLSIKPPEVNQSHYGRRSLSFLP 389
           T+ ++PP+V  + YG R +  LP
Sbjct: 627 TVRVRPPKVYPTPYGGRLVWTLP 649


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +3

Query: 417 DVSEIEFVFVRLFFILY**KRDAFLCNIIKTEGKNV 524
           D+  I ++ V +F+       + FLC+ I  EG+ +
Sbjct: 254 DIYMIVYIIVVIFWYTVNASTNIFLCDEICNEGQTI 289


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +3

Query: 417 DVSEIEFVFVRLFFILY**KRDAFLCNIIKTEGKNV 524
           D+  I ++ V +F+       + FLC+ I  EG+ +
Sbjct: 254 DIYMIVYIIVVIFWYTVNASTNIFLCDEICNEGQTI 289


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 37  FLLVA*GTHWLN 72
           F+L+A G HWL+
Sbjct: 143 FMLIALGEHWLS 154


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 37  FLLVA*GTHWLN 72
           F+L+A G HWL+
Sbjct: 143 FMLIALGEHWLS 154


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,195
Number of Sequences: 336
Number of extensions: 3739
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)