Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30442
         (718 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.        24   4.1  
AF203339-1|AAF19834.1|  156|Anopheles gambiae immune-responsive ...    24   4.1  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   9.5  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   9.5  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   9.5  

>DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.
          Length = 409

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 16/62 (25%), Positives = 28/62 (45%)
 Frame = -2

Query: 240 TTFFSNHYETQNFLNKLLCFSVNNYHCSLKFMHTFNPLSFSPDLYKWVAKGTALARVEPV 61
           T FF + +     +NK    +  +YH  L+ +   NP   +  +  WV++ T     E V
Sbjct: 122 TNFFVDDFI--EVINKYQQIANTHYHAMLEKVSYSNPTQTAATINNWVSEHTNGRLREIV 179

Query: 60  SP 55
           +P
Sbjct: 180 TP 181


>AF203339-1|AAF19834.1|  156|Anopheles gambiae immune-responsive
           serpin-related proteinISerpF1 protein.
          Length = 156

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 16/62 (25%), Positives = 28/62 (45%)
 Frame = -2

Query: 240 TTFFSNHYETQNFLNKLLCFSVNNYHCSLKFMHTFNPLSFSPDLYKWVAKGTALARVEPV 61
           T FF + +     +NK    +  +YH  L+ +   NP   +  +  WV++ T     E V
Sbjct: 23  TNFFVDDFI--EVINKYQQIANTHYHAMLEKVSYSNPTQTAATINNWVSEHTNGRLREIV 80

Query: 60  SP 55
           +P
Sbjct: 81  TP 82


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +3

Query: 582 KMYEPK--CVRANACCVDCVRSVFTGTS 659
           K+YE    C RANA C + +RS    T+
Sbjct: 388 KLYEDTKICSRANARCYEQIRSSIAFTA 415


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +3

Query: 582 KMYEPK--CVRANACCVDCVRSVFTGTS 659
           K+YE    C RANA C + +RS    T+
Sbjct: 388 KLYEDTKICSRANARCYEQIRSSIAFTA 415


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 652 GRVGIDVKRNVGKLCAMANI 711
           G+V +D KR   +LCA+  +
Sbjct: 545 GKVALDKKRKGDRLCAVVTV 564


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 733,449
Number of Sequences: 2352
Number of extensions: 14534
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)