Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30442
         (718 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC056871-1|AAH56871.1|  933|Homo sapiens phospholipase D2 protein.     31   3.1  
AF038441-1|AAB96656.1|  922|Homo sapiens phospholipase D2 protein.     31   3.1  
AF038440-1|AAB96655.1|  933|Homo sapiens phospholipase D2 protein.     31   3.1  
AF035483-1|AAC24498.1|  933|Homo sapiens phospholipase D2 protein.     31   3.1  

>BC056871-1|AAH56871.1|  933|Homo sapiens phospholipase D2 protein.
          Length = 933

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -2

Query: 210 QNFLNKLLCFS-VNNYHCSLKFMHTFNPLSFSPDL 109
           +N+LN+LL  S   NYH   +F+   + LSF PDL
Sbjct: 167 ENYLNRLLTMSFYRNYHAMTEFLEV-SQLSFIPDL 200


>AF038441-1|AAB96656.1|  922|Homo sapiens phospholipase D2 protein.
          Length = 922

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -2

Query: 210 QNFLNKLLCFS-VNNYHCSLKFMHTFNPLSFSPDL 109
           +N+LN+LL  S   NYH   +F+   + LSF PDL
Sbjct: 167 ENYLNRLLTMSFYRNYHAMTEFLEV-SQLSFIPDL 200


>AF038440-1|AAB96655.1|  933|Homo sapiens phospholipase D2 protein.
          Length = 933

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -2

Query: 210 QNFLNKLLCFS-VNNYHCSLKFMHTFNPLSFSPDL 109
           +N+LN+LL  S   NYH   +F+   + LSF PDL
Sbjct: 167 ENYLNRLLTMSFYRNYHAMTEFLEV-SQLSFIPDL 200


>AF035483-1|AAC24498.1|  933|Homo sapiens phospholipase D2 protein.
          Length = 933

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -2

Query: 210 QNFLNKLLCFS-VNNYHCSLKFMHTFNPLSFSPDL 109
           +N+LN+LL  S   NYH   +F+   + LSF PDL
Sbjct: 167 ENYLNRLLTMSFYRNYHAMTEFLEV-SQLSFIPDL 200


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,132,643
Number of Sequences: 237096
Number of extensions: 1969379
Number of successful extensions: 2760
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2754
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)