Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30442
         (718 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134239-3|AAD43053.1|  470|Drosophila melanogaster Recq helicas...    32   0.68 
AF134239-2|AAD43052.1|  468|Drosophila melanogaster Recq helicas...    32   0.68 
AF134239-1|AAD43051.1| 1057|Drosophila melanogaster Recq helicas...    32   0.68 
AE014296-2402|AAF49724.2|  470|Drosophila melanogaster CG4879-PA...    32   0.68 
AE014296-2401|AAX52745.1|  468|Drosophila melanogaster CG4879-PC...    32   0.68 
AE014296-2400|AAN11801.1| 1058|Drosophila melanogaster CG4879-PB...    32   0.68 
AB031087-1|BAA88313.1| 1058|Drosophila melanogaster DNA helicase...    32   0.68 
AB031086-1|BAA88312.1| 1058|Drosophila melanogaster DNA helicase...    32   0.68 
AY069756-1|AAL39901.1|  880|Drosophila melanogaster LP12157p pro...    29   6.3  
AL009146-2|CAA15627.1|  880|Drosophila melanogaster EG:17A9.1,FB...    29   6.3  
AE014298-236|AAN09053.1|  880|Drosophila melanogaster CG11491-PC...    29   6.3  
AE014298-235|AAF45647.1|  880|Drosophila melanogaster CG11491-PB...    29   6.3  
AY122110-1|AAM52622.1|  590|Drosophila melanogaster GH12419p pro...    29   8.4  
AE014298-3087|AAZ52506.1|  590|Drosophila melanogaster CG11566-P...    29   8.4  

>AF134239-3|AAD43053.1|  470|Drosophila melanogaster Recq helicase 5
           protein.
          Length = 470

 Score = 32.3 bits (70), Expect = 0.68
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -2

Query: 249 QNCTTFFSNHYETQNFLNKLLCFSVNNYHCSLKFMHTFNP 130
           Q  T FF +  +T +  NKL  F+V+  HC  ++ H F P
Sbjct: 124 QAATKFFQDLLQTLHKHNKLAYFAVDEAHCVSQWGHDFRP 163


>AF134239-2|AAD43052.1|  468|Drosophila melanogaster Recq helicase 5
           protein.
          Length = 468

 Score = 32.3 bits (70), Expect = 0.68
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -2

Query: 249 QNCTTFFSNHYETQNFLNKLLCFSVNNYHCSLKFMHTFNP 130
           Q  T FF +  +T +  NKL  F+V+  HC  ++ H F P
Sbjct: 124 QAATKFFQDLLQTLHKHNKLAYFAVDEAHCVSQWGHDFRP 163


>AF134239-1|AAD43051.1| 1057|Drosophila melanogaster Recq helicase 5
           protein.
          Length = 1057

 Score = 32.3 bits (70), Expect = 0.68
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -2

Query: 249 QNCTTFFSNHYETQNFLNKLLCFSVNNYHCSLKFMHTFNP 130
           Q  T FF +  +T +  NKL  F+V+  HC  ++ H F P
Sbjct: 124 QAATKFFQDLLQTLHKHNKLAYFAVDEAHCVSQWGHDFRP 163


>AE014296-2402|AAF49724.2|  470|Drosophila melanogaster CG4879-PA,
           isoform A protein.
          Length = 470

 Score = 32.3 bits (70), Expect = 0.68
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -2

Query: 249 QNCTTFFSNHYETQNFLNKLLCFSVNNYHCSLKFMHTFNP 130
           Q  T FF +  +T +  NKL  F+V+  HC  ++ H F P
Sbjct: 124 QAATKFFQDLLQTLHKHNKLAYFAVDEAHCVSQWGHDFRP 163


>AE014296-2401|AAX52745.1|  468|Drosophila melanogaster CG4879-PC,
           isoform C protein.
          Length = 468

 Score = 32.3 bits (70), Expect = 0.68
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -2

Query: 249 QNCTTFFSNHYETQNFLNKLLCFSVNNYHCSLKFMHTFNP 130
           Q  T FF +  +T +  NKL  F+V+  HC  ++ H F P
Sbjct: 124 QAATKFFQDLLQTLHKHNKLAYFAVDEAHCVSQWGHDFRP 163


>AE014296-2400|AAN11801.1| 1058|Drosophila melanogaster CG4879-PB,
           isoform B protein.
          Length = 1058

 Score = 32.3 bits (70), Expect = 0.68
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -2

Query: 249 QNCTTFFSNHYETQNFLNKLLCFSVNNYHCSLKFMHTFNP 130
           Q  T FF +  +T +  NKL  F+V+  HC  ++ H F P
Sbjct: 124 QAATKFFQDLLQTLHKHNKLAYFAVDEAHCVSQWGHDFRP 163


>AB031087-1|BAA88313.1| 1058|Drosophila melanogaster DNA helicase
           RECQE protein.
          Length = 1058

 Score = 32.3 bits (70), Expect = 0.68
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -2

Query: 249 QNCTTFFSNHYETQNFLNKLLCFSVNNYHCSLKFMHTFNP 130
           Q  T FF +  +T +  NKL  F+V+  HC  ++ H F P
Sbjct: 124 QAATKFFQDLLQTLHKHNKLAYFAVDEAHCVSQWGHDFRP 163


>AB031086-1|BAA88312.1| 1058|Drosophila melanogaster DNA helicase
           RECQE protein.
          Length = 1058

 Score = 32.3 bits (70), Expect = 0.68
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -2

Query: 249 QNCTTFFSNHYETQNFLNKLLCFSVNNYHCSLKFMHTFNP 130
           Q  T FF +  +T +  NKL  F+V+  HC  ++ H F P
Sbjct: 124 QAATKFFQDLLQTLHKHNKLAYFAVDEAHCVSQWGHDFRP 163


>AY069756-1|AAL39901.1|  880|Drosophila melanogaster LP12157p
           protein.
          Length = 880

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 336 PPEVNQSHYGRRSLSFLPNNH 398
           PP  + SH+G+  LS LP++H
Sbjct: 587 PPPSHHSHFGQHPLSLLPSHH 607


>AL009146-2|CAA15627.1|  880|Drosophila melanogaster
           EG:17A9.1,FBgn0000210;br protein.
          Length = 880

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 336 PPEVNQSHYGRRSLSFLPNNH 398
           PP  + SH+G+  LS LP++H
Sbjct: 587 PPPSHHSHFGQHPLSLLPSHH 607


>AE014298-236|AAN09053.1|  880|Drosophila melanogaster CG11491-PC,
           isoform C protein.
          Length = 880

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 336 PPEVNQSHYGRRSLSFLPNNH 398
           PP  + SH+G+  LS LP++H
Sbjct: 587 PPPSHHSHFGQHPLSLLPSHH 607


>AE014298-235|AAF45647.1|  880|Drosophila melanogaster CG11491-PB,
           isoform B protein.
          Length = 880

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 336 PPEVNQSHYGRRSLSFLPNNH 398
           PP  + SH+G+  LS LP++H
Sbjct: 587 PPPSHHSHFGQHPLSLLPSHH 607


>AY122110-1|AAM52622.1|  590|Drosophila melanogaster GH12419p
           protein.
          Length = 590

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 22/58 (37%), Positives = 27/58 (46%)
 Frame = -2

Query: 222 HYETQNFLNKLLCFSVNNYHCSLKFMHTFNPLSFSPDLYKWVAKGTALARVEPVSPLG 49
           ++ T   L +L CFSV N H  LK     +PLS S   YK    G   A  E +S  G
Sbjct: 26  YFHTYISLQRLPCFSVANIHAKLK--EGQHPLSDSYKRYK--QPGITTASQEGLSSAG 79


>AE014298-3087|AAZ52506.1|  590|Drosophila melanogaster CG11566-PA
           protein.
          Length = 590

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 22/58 (37%), Positives = 27/58 (46%)
 Frame = -2

Query: 222 HYETQNFLNKLLCFSVNNYHCSLKFMHTFNPLSFSPDLYKWVAKGTALARVEPVSPLG 49
           ++ T   L +L CFSV N H  LK     +PLS S   YK    G   A  E +S  G
Sbjct: 26  YFHTYISLQRLPCFSVANIHAKLK--EGQHPLSDSYKRYK--QPGITTASQEGLSSAG 79


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,383,012
Number of Sequences: 53049
Number of extensions: 575343
Number of successful extensions: 957
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)