Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30442
         (718 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical pr...    33   0.20 
Z77136-4|CAB00881.1|  526|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AF059608-1|AAD13737.1|  526|Caenorhabditis elegans N2,N2-dimethy...    29   2.5  
Z81486-13|CAE47465.1|  611|Caenorhabditis elegans Hypothetical p...    28   5.8  
Z81486-12|CAC42272.1|  585|Caenorhabditis elegans Hypothetical p...    28   5.8  
Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AY221631-1|AAP97492.1|  611|Caenorhabditis elegans muscarinic ac...    28   5.8  
AL034391-3|CAE47471.1|  611|Caenorhabditis elegans Hypothetical ...    28   5.8  
AL034391-2|CAA22301.2|  585|Caenorhabditis elegans Hypothetical ...    28   5.8  
AF139093-1|AAD48771.1|  585|Caenorhabditis elegans muscarinic ac...    28   5.8  

>Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical
           protein F59F3.5 protein.
          Length = 1199

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 21/57 (36%), Positives = 31/57 (54%)
 Frame = -1

Query: 580 FYNNNKKKSNLT*YSGFIHTFFPSVFIILHKKASRFH*YNIKKRRTKTNSISLTSKA 410
           FY N  +K + T   GFI+ F      +L K+   F   N+KK++T T  I++TS A
Sbjct: 521 FYKNKLRKIDDTFEKGFIYNF------VLAKRTD-FKCINVKKKKTSTKFITVTSNA 570


>Z77136-4|CAB00881.1|  526|Caenorhabditis elegans Hypothetical
           protein ZC376.5 protein.
          Length = 526

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -2

Query: 183 FSVNNYHCSLKFMHTFNPLSFSPDLYKWVAKGTALAR 73
           F V+  HC+ + + T  P+    D+Y+ VAK T++ R
Sbjct: 416 FKVSGSHCNPRAIKTNAPMHLLWDIYRQVAKDTSVDR 452


>AF059608-1|AAD13737.1|  526|Caenorhabditis elegans
           N2,N2-dimethylguanosine tRNA methyltransferase protein.
          Length = 526

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -2

Query: 183 FSVNNYHCSLKFMHTFNPLSFSPDLYKWVAKGTALAR 73
           F V+  HC+ + + T  P+    D+Y+ VAK T++ R
Sbjct: 416 FKVSGSHCNPRAIKTNAPMHLLWDIYRQVAKDTSVDR 452


>Z81486-13|CAE47465.1|  611|Caenorhabditis elegans Hypothetical
           protein Y40H4A.1b protein.
          Length = 611

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 436 LFSFAFFLYYINENVTPFC 492
           L++F++FL YIN  + P C
Sbjct: 558 LWTFSYFLCYINSTINPLC 576


>Z81486-12|CAC42272.1|  585|Caenorhabditis elegans Hypothetical
           protein Y40H4A.1a protein.
          Length = 585

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 436 LFSFAFFLYYINENVTPFC 492
           L++F++FL YIN  + P C
Sbjct: 532 LWTFSYFLCYINSTINPLC 550


>Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical
           protein C25F9.2 protein.
          Length = 1469

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = +1

Query: 565 YCYCKKKCMS--LNACAPTRAV*IVCDPC 645
           Y YCK KCM+   N C P     IVC  C
Sbjct: 478 YLYCKAKCMNCGTNTCEPGNDK-IVCGEC 505


>AY221631-1|AAP97492.1|  611|Caenorhabditis elegans muscarinic
           acetylcholine receptorlarge isoform protein.
          Length = 611

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 436 LFSFAFFLYYINENVTPFC 492
           L++F++FL YIN  + P C
Sbjct: 558 LWTFSYFLCYINSTINPLC 576


>AL034391-3|CAE47471.1|  611|Caenorhabditis elegans Hypothetical
           protein Y40H4A.1b protein.
          Length = 611

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 436 LFSFAFFLYYINENVTPFC 492
           L++F++FL YIN  + P C
Sbjct: 558 LWTFSYFLCYINSTINPLC 576


>AL034391-2|CAA22301.2|  585|Caenorhabditis elegans Hypothetical
           protein Y40H4A.1a protein.
          Length = 585

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 436 LFSFAFFLYYINENVTPFC 492
           L++F++FL YIN  + P C
Sbjct: 532 LWTFSYFLCYINSTINPLC 550


>AF139093-1|AAD48771.1|  585|Caenorhabditis elegans muscarinic
           acetylcholine receptor protein.
          Length = 585

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 436 LFSFAFFLYYINENVTPFC 492
           L++F++FL YIN  + P C
Sbjct: 532 LWTFSYFLCYINSTINPLC 550


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,214,282
Number of Sequences: 27780
Number of extensions: 326038
Number of successful extensions: 606
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)