Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30440
(748 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0916 - 25932934-25933090,25933170-25933276,25933356-259334... 83 3e-16
02_05_0083 + 25684816-25685383,25685474-25685499,25686325-256867... 33 0.18
06_03_0615 - 22761375-22761760,22762218-22765026 31 0.97
01_01_1206 - 9702128-9702184,9702272-9702323,9702410-9702471,970... 31 1.3
08_02_1282 - 25852113-25852406,25852495-25852668,25852849-258529... 30 1.7
10_08_0601 + 19103745-19105162,19105253-19105717,19106314-19106539 30 2.2
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 30 2.2
10_08_0568 + 18837195-18837203,18837694-18837741,18837853-188379... 29 3.0
08_01_0312 + 2764744-2767390,2767632-2767990 29 3.0
07_01_0864 - 7185070-7185141,7185274-7185402,7185585-7185695,718... 29 5.2
06_02_0335 - 14591512-14591772,14594021-14594215,14594379-145946... 28 6.9
03_03_0242 + 15765726-15765965,15766703-15766874,15767056-157672... 28 6.9
02_05_0322 - 27926619-27927686 28 9.1
>06_03_0916 -
25932934-25933090,25933170-25933276,25933356-25933422,
25933509-25933624,25933873-25933944,25934055-25934255,
25934652-25934728,25935131-25935230
Length = 298
Score = 82.6 bits (195), Expect = 3e-16
Identities = 65/203 (32%), Positives = 99/203 (48%), Gaps = 13/203 (6%)
Frame = +1
Query: 4 NKSQNQELIKVTTTNKESYECQLPELRSTESTSIDDYDGPSPL----HLLKP-----LMN 156
N QE + +T+ + Y C LP + SI + + + +KP L+
Sbjct: 58 NPENGQESVPMTSHVGKHYTCFLPVEETKTMKSIIPQNATNVIIESERRVKPKDPDELLE 117
Query: 157 --KEMCSYRLESYWSYEVCHGRYIRQYHEEREGKQINTQEYFLG-YWSPEKQAKLEAEMK 327
K+ C YR E +WSYE C+ IRQ H EG+++ QEY LG Y + A E +
Sbjct: 118 ILKDQCFYRHEGWWSYEFCYYGKIRQVHV--EGEKV-IQEYVLGEYDADATDAYYENQTS 174
Query: 328 -AAQESKQIPKTTKVEGVALPNVEIVMDDGTICDLNGKPRLTRVHYVCYTHGKHEVYSFR 504
+A E + T+K V L +GT+CDL PR T V +VC + + S +
Sbjct: 175 DSADEDDNLIDTSKRYHVHL------YTNGTVCDLTDMPRETEVRFVC-SEPTVVISSIK 227
Query: 505 ETSTCEYEIIILSPFLCEHPQFK 573
E S+C+Y + + SP LC++P F+
Sbjct: 228 EISSCKYVLTVQSPMLCKNPLFQ 250
>02_05_0083 +
25684816-25685383,25685474-25685499,25686325-25686718,
25687726-25687814,25687924-25687980,25688341-25688408,
25688511-25688617,25688698-25688768,25688844-25688912
Length = 482
Score = 33.5 bits (73), Expect = 0.18
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Frame = +1
Query: 103 IDDYDGPSPLHLLKPLMNKEMCSYRLESYWSYEVC---HGRYIRQYHEE-----REGKQI 258
++D + + +K +++KE+ ++ E Y +Y H ++QY+E+ REG Q
Sbjct: 311 LEDISSETNCYPVKVILSKELVAHNEEDYQNYRRAAKQHWDMMKQYYEKAVDAFREGNQ- 369
Query: 259 NTQEYFLGYWSPEKQAKLEAEMKAAQESKQIPKTTKVE 372
EY LG K + A + + S +I K+ KVE
Sbjct: 370 KEVEYLLG---EGKHYYMMARLADEKSSAEIVKSKKVE 404
>06_03_0615 - 22761375-22761760,22762218-22765026
Length = 1064
Score = 31.1 bits (67), Expect = 0.97
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1
Query: 694 VLCSDDEISNCSLPFSISPLASLEHLRLGGS 602
VLC D + N ++P S+ L +L+ R+GG+
Sbjct: 171 VLCVQDNLLNGTIPASLGALTALQQFRVGGN 201
>01_01_1206 -
9702128-9702184,9702272-9702323,9702410-9702471,
9702578-9702665,9703027-9703095,9703224-9703281,
9703895-9703996,9704075-9704179,9704273-9704624,
9706005-9706100,9706427-9706501,9707192-9707370,
9707501-9707740,9707922-9708017,9708193-9708306,
9708428-9708527
Length = 614
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 430 NGKPRLTRVHYVCYTHGKHEVYSFRETSTCEYEIIILSPFLCEHPQFKPMD 582
NG R +V C + +E+ E S CEY ++ +P LC+ + K ++
Sbjct: 551 NGPDRSLKVRLRCGLN--NELNGVDEPSRCEYVAVLSTPALCDEQKLKELE 599
>08_02_1282 -
25852113-25852406,25852495-25852668,25852849-25852940,
25853465-25853587,25853691-25853721,25854295-25854434,
25854871-25854932,25855027-25855103,25855766-25855868,
25856146-25856207,25857213-25857374
Length = 439
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 526 EIIILSPFLCE-HPQFKPMDVSENVINCLPIGD 621
E+++LSP + H Q +P +S+ N P+GD
Sbjct: 170 EVMVLSPSVINRHEQLRPFSISQMFTNFCPVGD 202
>10_08_0601 + 19103745-19105162,19105253-19105717,19106314-19106539
Length = 702
Score = 29.9 bits (64), Expect = 2.2
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = +1
Query: 193 SYEVCH-GRYIRQYHEEREGKQINTQEYFLGYWSPEKQAKLEAEMKAAQESKQIPKTTKV 369
S+++ H R + +HE G+ NT E Y +P QA L ++ + E + +
Sbjct: 318 SFDMAHCSRCLIPWHEF--GEHFNTFELVSMYLAPSFQAILRSKYCSLIELDVL--NFLL 373
Query: 370 EGVALPNVEIVMDDGTICDLNGKPRLTRVHYVCYTHGKHEV 492
+G+ L V+ ++ G L+G P + HY + K ++
Sbjct: 374 DGIYLAEVDRILRPGGYWILSGPPINWKTHYKGWERTKEDL 414
>02_01_0246 +
1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 29.9 bits (64), Expect = 2.2
Identities = 30/110 (27%), Positives = 44/110 (40%)
Frame = +1
Query: 52 ESYECQLPELRSTESTSIDDYDGPSPLHLLKPLMNKEMCSYRLESYWSYEVCHGRYIRQY 231
ES E LPE E S+DD + L+ L + S + E E CH +
Sbjct: 296 ESKESDLPETEQAEEASVDDQEA---LNQQPALETNDSLSVKAE-----ETCHQSNVATC 347
Query: 232 HEEREGKQINTQEYFLGYWSPEKQAKLEAEMKAAQESKQIPKTTKVEGVA 381
E+ T+E + + Q +E EMK A E+ +T + VA
Sbjct: 348 GEKTPEDDATTREPTVDTKEEQNQGSVE-EMKDA-EAVDTEETVQQSSVA 395
>10_08_0568 + 18837195-18837203,18837694-18837741,18837853-18837912,
18837986-18838155,18838297-18838369,18838529-18838594,
18838685-18838768,18838950-18839027,18839122-18839205,
18839562-18839641,18839791-18839848,18839933-18840235,
18840361-18840531,18840972-18841204,18841303-18841705,
18841961-18842212,18842293-18842790,18843073-18843170,
18843314-18843413,18843653-18843798,18843912-18844068
Length = 1056
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/94 (22%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Frame = +1
Query: 52 ESYECQLPELRSTESTSIDDYDGPSPLHLLKPLMNKEMCSY-RLESYWSYEVCHGRYIRQ 228
+ Y+ Q+ L S S I D P+P + ++NK++ Y +L + E + ++
Sbjct: 940 QCYQAQISTLASVSSLKILTEDDPTPPNCATNIVNKDLSVYLQLRGALNTEAEREKLRKK 999
Query: 229 YHE-EREGKQINTQEYFLGYWSPEKQAKLEAEMK 327
E +++ ++ + GY Q+K + +MK
Sbjct: 1000 RDEIQKQHDTLSQKMNASGYREKAPQSKQDEDMK 1033
>08_01_0312 + 2764744-2767390,2767632-2767990
Length = 1001
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = -1
Query: 679 DEISNC---SLPFSISPLASLEHLRLGGS 602
D SNC LP I L LEHL LGGS
Sbjct: 159 DAFSNCFVGELPRGIGELRRLEHLNLGGS 187
>07_01_0864 -
7185070-7185141,7185274-7185402,7185585-7185695,
7186114-7186292,7186479-7186576,7186691-7186956,
7187895-7188050,7188131-7188319,7188711-7188824,
7189131-7189273,7189683-7189818,7189954-7190058
Length = 565
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 7/47 (14%)
Frame = +2
Query: 467 VTHMESMR-FIPSERLLLASTRSLF------CRRFYVNIHSSNLWML 586
+T ++S+R +P L L + +++ C F+ ++H+ NLW+L
Sbjct: 346 LTDLDSIRSLVPDPELTLVTALNVWFGSLISCESFHADVHAGNLWLL 392
>06_02_0335 -
14591512-14591772,14594021-14594215,14594379-14594679,
14594930-14595051,14595287-14595466,14595514-14596337,
14596377-14596435,14596480-14597075
Length = 845
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 179 WKAIGAMKYAMEGISGSIMKKER 247
WKAIG ++A++GISG KK R
Sbjct: 684 WKAIGWQRFAVKGISG--FKKNR 704
>03_03_0242 +
15765726-15765965,15766703-15766874,15767056-15767209,
15767287-15767350,15767533-15767640,15767817-15767942,
15768037-15768269,15768565-15768787
Length = 439
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -1
Query: 253 VCPLFLHDTAGYTFHGILHSSNSFPIYMNTFLCSSKALEGEEVMDHRNH 107
VC L + G + HG + ++ + FLCSS L+ +E M+ + H
Sbjct: 384 VCQLVMKPGEGISVHGSIPRNSRVDPWGGPFLCSSCQLK-KEAMEGKQH 431
>02_05_0322 - 27926619-27927686
Length = 355
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 619 DAPRKPRDLLKMEANSLRFHHQSIRLMDNADQTVKDILA 735
++PR LL++ N FH+ + LMD++ V D+ A
Sbjct: 225 ESPRPDTPLLRLAWNRYDFHYMATLLMDSSAVVVLDMRA 263
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.133 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,817,728
Number of Sequences: 37544
Number of extensions: 423187
Number of successful extensions: 1318
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1316
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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