Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30440
(748 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132876-2|CAB60843.3| 534|Caenorhabditis elegans Hypothetical ... 136 2e-32
U23514-6|AAC46544.2| 816|Caenorhabditis elegans Hypothetical pr... 58 5e-09
AF078788-3|AAC26966.1| 547|Caenorhabditis elegans Hypothetical ... 30 2.0
Z82280-9|CAB05263.3| 415|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z82275-2|CAC42314.2| 415|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z74031-13|CAE54903.1| 383|Caenorhabditis elegans Hypothetical p... 29 4.6
Z74031-12|CAE54902.1| 460|Caenorhabditis elegans Hypothetical p... 29 4.6
Z74031-11|CAD54138.1| 474|Caenorhabditis elegans Hypothetical p... 29 4.6
AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical ... 28 8.1
>AL132876-2|CAB60843.3| 534|Caenorhabditis elegans Hypothetical
protein Y105E8A.2 protein.
Length = 534
Score = 136 bits (329), Expect = 2e-32
Identities = 65/204 (31%), Positives = 117/204 (57%), Gaps = 3/204 (1%)
Frame = +1
Query: 4 NKSQNQELIKVTTTNKESYECQLPELRSTESTSIDDYDGPSPLHLLKPLMNKE-MCSYRL 180
N + + +++ + N E + C+LP++ +++ Y G + LL+ ++ K+ MCSY +
Sbjct: 55 NTELSDDYVRIMSKNNERFLCKLPQIDVEVKKNVE-YSGATAGKLLETMLYKDKMCSYLI 113
Query: 181 ESYWSYEVCHGRYIRQYHEERE-GKQINTQEYFLGYWSPEKQAKLEAEMKAAQESKQIPK 357
+ YW+Y+VCHGRY+ QYHE++ Q++ E++LG + A ++K P
Sbjct: 114 DVYWTYQVCHGRYVIQYHEDKMLTGQVSRTEFYLGNFDSALTASTNEQVK--------PA 165
Query: 358 TTKVEGVALPNVEIVMDDGTICDLNG-KPRLTRVHYVCYTHGKHEVYSFRETSTCEYEII 534
T ++E P + + GT CD+ G KPR T V Y+C +H++ S E S+C YEI+
Sbjct: 166 TRRIENEDYPYYSVSYNHGTSCDVTGGKPRTTDVVYICVEKVQHKILSVTEISSCHYEIV 225
Query: 535 ILSPFLCEHPQFKPMDVSENVINC 606
I++ LC+HP+++ + ++ I C
Sbjct: 226 IMTDLLCKHPEYQLSEKKDHKIVC 249
Score = 48.0 bits (109), Expect = 7e-06
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 8/154 (5%)
Frame = +1
Query: 133 HLLKPLMNKEMCSYRLESYWSYEVCHGRYIRQYHEEREGKQINTQEYFLGYWSP---EKQ 303
H + ++ E C +W YE C+G+++ Q+HE+ G++ + LG + ++
Sbjct: 341 HTVNRILTGEDCIVGGTGWWKYEFCYGKHVIQFHEDANGQR---SDILLGVFDEVVHKEW 397
Query: 304 AKLEAEMKAA-QESKQIPKTTKVEGVALPNVEIVMDDGTICDLNGKPRLTRVHYVCYTHG 480
KL+ + A Q + QI + +++ G ICD G + V C T
Sbjct: 398 VKLDRHARGAIQGNNQIDQISQIYA-----------KGDICDETGAHNV-EVRIRCAT-A 444
Query: 481 KHEVYSF----RETSTCEYEIIILSPFLCEHPQF 570
H SF E TC+Y + I S CE QF
Sbjct: 445 DHSALSFSMHLTEPRTCQYVLTIDSERFCEPLQF 478
>U23514-6|AAC46544.2| 816|Caenorhabditis elegans Hypothetical
protein F48E8.4 protein.
Length = 816
Score = 58.4 bits (135), Expect = 5e-09
Identities = 55/209 (26%), Positives = 82/209 (39%), Gaps = 8/209 (3%)
Frame = +1
Query: 10 SQNQELIKVTTTNKESYECQLPELRSTESTSIDDYDGPSPL-HLLKPLMNKEMC-SYRLE 183
S Q L+ VT+ + + C LP++ + P L + C R
Sbjct: 71 STEQNLMFVTSKGGQKFACSLPDVEDVKKDKPKSSKNPKIYGDALAASFYVDKCVKLRGN 130
Query: 184 SYWSYEVCHGRYIRQYHEEREGKQINTQEYFLGYWSPEKQAKLEAEMKAAQESKQIPKTT 363
+WSY +C G+ I Q H E P ++ ++ + S ++P
Sbjct: 131 HWWSYILCRGQTIEQVHGE-----------------PGQEGYVKNILGLFDGSLKMPSYQ 173
Query: 364 KVEGVALPNVEIVMDDGTICDLNG--KPRLTRVHYVCYTH-GKHEVY--SFRETSTCEYE 528
+ L VE GT CDL +PR+T V Y C +EVY S E C+Y
Sbjct: 174 ESTDDRLLFVEETYTSGTFCDLEEYREPRMTSVRYECDAQLSTNEVYISSVVEVKPCQYL 233
Query: 529 IIILSPFLCEHPQFKPMDVSE-NVINCLP 612
+I+ LC +P+F P S I C P
Sbjct: 234 MIVKVGTLCRYPEFLPASQSNTKKIGCQP 262
>AF078788-3|AAC26966.1| 547|Caenorhabditis elegans Hypothetical
protein ZC190.6 protein.
Length = 547
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = -2
Query: 321 FSLQLSLLFRAPISQKVFLGVDLFALSFFMILPDIPSMAYFIAPIAFQSI*THF 160
FSL S++ S V +G D+F+ + M L DI S + I IA+Q +H+
Sbjct: 127 FSLLGSIIISIGFSYTVHMGQDMFSPTVAMTLVDISSCIFLI--IAWQKSLSHY 178
>Z82280-9|CAB05263.3| 415|Caenorhabditis elegans Hypothetical
protein R05A10.1 protein.
Length = 415
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 313 EAEMKAAQESKQIPKTTKVEGVALPNVEIVMDDG 414
EA MK E ++P T V+GV LP ++D G
Sbjct: 138 EAAMKKHGEKNEVPGKTNVDGVDLPKGWSLVDGG 171
>Z82275-2|CAC42314.2| 415|Caenorhabditis elegans Hypothetical
protein R05A10.1 protein.
Length = 415
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 313 EAEMKAAQESKQIPKTTKVEGVALPNVEIVMDDG 414
EA MK E ++P T V+GV LP ++D G
Sbjct: 138 EAAMKKHGEKNEVPGKTNVDGVDLPKGWSLVDGG 171
>Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical
protein T05F1.11 protein.
Length = 676
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 220 IRQYHEEREGKQINTQEYFLGYWSPEKQAKLEAEMKAAQESKQIPK 357
+R+ EE + K++ +E + + E + KLEAEM+ E +I +
Sbjct: 463 VRKLKEEEKRKRVLEEEMEMKRKNEEAKIKLEAEMREKAEQAEIKR 508
>Z74031-13|CAE54903.1| 383|Caenorhabditis elegans Hypothetical
protein F32D8.12c protein.
Length = 383
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 388 NVEIVMDDGTICDLNGKPRLTR 453
N+E+V+ DGTI D GK R R
Sbjct: 84 NLEVVLADGTIIDTKGKGRCPR 105
>Z74031-12|CAE54902.1| 460|Caenorhabditis elegans Hypothetical
protein F32D8.12b protein.
Length = 460
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 388 NVEIVMDDGTICDLNGKPRLTR 453
N+E+V+ DGTI D GK R R
Sbjct: 161 NLEVVLADGTIIDTKGKGRCPR 182
>Z74031-11|CAD54138.1| 474|Caenorhabditis elegans Hypothetical
protein F32D8.12a protein.
Length = 474
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 388 NVEIVMDDGTICDLNGKPRLTR 453
N+E+V+ DGTI D GK R R
Sbjct: 175 NLEVVLADGTIIDTKGKGRCPR 196
>AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical
protein D1007.15 protein.
Length = 1184
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 34 VTTTNKESYECQLPELRSTESTSIDDYDGP 123
+ T N+ CQLP L S S+D++ GP
Sbjct: 472 IATANRRCV-CQLPSLLGFTSKSLDNFQGP 500
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.133 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,342,331
Number of Sequences: 27780
Number of extensions: 378572
Number of successful extensions: 1224
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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