Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30438
         (540 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    27   0.080
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   2.3  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   4.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   6.9  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   6.9  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   6.9  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 27.5 bits (58), Expect = 0.080
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 349 SSNAFRFEGWGSCCNYTETLELISQGGWRI 438
           + N+ ++ G      Y E +EL  +GGW++
Sbjct: 284 AGNSGKYTGEAGMLGYNEIVELQKEGGWKV 313


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +1

Query: 325 PPCLFLPWSSNAFRFEGWGS 384
           P C+ +PW  NA     W +
Sbjct: 326 PICVQIPWDKNAEALAKWAN 345


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 355 NAFRFEGWGSCCNYTETLELISQGGW 432
           +A R+ G      Y E +E  + GGW
Sbjct: 290 DAGRYTGERGMMGYNEIVEAQNAGGW 315


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 392 TILRP*SLYLKVDGAFTL*ISVDS 463
           TIL P +++L + GAF     +D+
Sbjct: 920 TILGPGTIFLMLVGAFVAAFQIDN 943


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 392 TILRP*SLYLKVDGAFTL*ISVDS 463
           TIL P +++L + GAF     +D+
Sbjct: 920 TILGPGTIFLMLVGAFVAAFQIDN 943


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 392 TILRP*SLYLKVDGAFTL*ISVDS 463
           TIL P +++L + GAF     +D+
Sbjct: 920 TILGPGTIFLMLVGAFVAAFQIDN 943


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 392 TILRP*SLYLKVDGAFTL*ISVDS 463
           TIL P +++L + GAF     +D+
Sbjct: 920 TILGPGTIFLMLVGAFVAAFQIDN 943


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = +3

Query: 42  FDVFPNSVIFNTSNEVYDI 98
           FD+F N + F     ++D+
Sbjct: 146 FDLFANGITFGWHTYIFDV 164


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +1

Query: 127 VTQRVAGSLVRDIAIPR*NTSLIFITYLVICFLLTS-NFTNKIKPAKL*F 273
           +TQ++  S ++ +      T+ I++T L I F+LT   F+    P  + F
Sbjct: 22  MTQKLTLSPLKVLQTVILGTTCIYLTSLYIWFILTQMTFSGVTSPTIMKF 71


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +1

Query: 127 VTQRVAGSLVRDIAIPR*NTSLIFITYLVICFLLTS-NFTNKIKPAKL*F 273
           +TQ++  S ++ +      T+ I++T L I F+LT   F+    P  + F
Sbjct: 22  MTQKLTLSPLKVLQTVILGTTCIYLTSLYIWFILTQMTFSGVTSPTIMKF 71


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,315
Number of Sequences: 336
Number of extensions: 2996
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)