Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30438
         (540 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   5.0  
AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative odorant-b...    23   5.0  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   8.7  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 325 PPCLFLPWSSNAFRFEGWGS 384
           P C+ +PW  NA     W S
Sbjct: 313 PICVQIPWDRNAEALAKWAS 332


>AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative
           odorant-binding protein OBPjj17 protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 344 GRNKQGGGTYPCGLTRRPTTSNYANYSFAGFIL 246
           G+  Q GG YP G  R    + Y      G+++
Sbjct: 253 GQYDQRGGNYPRGTERNRNGNGYGAGDDGGYVV 285


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = -2

Query: 419 DISSKVSV*LQQLPHPSNRNALLLH 345
           D S    V LQQL  P NR  L LH
Sbjct: 826 DGSGGFRVPLQQLALPRNRGGLNLH 850


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,930
Number of Sequences: 2352
Number of extensions: 11180
Number of successful extensions: 30
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)