Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30438
         (540 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC125232-1|AAI25233.1| 1500|Homo sapiens ABCA6 protein protein.        29   7.9  
BC125231-1|AAI25232.1| 1500|Homo sapiens ABCA6 protein protein.        29   7.9  
AY028898-1|AAK30023.1| 1617|Homo sapiens ATP-binding cassette A6...    29   7.9  
AK097296-1|BAC04994.1|  815|Homo sapiens protein ( Homo sapiens ...    29   7.9  
AF373328-1|AAM77558.1| 1617|Homo sapiens ABC transporter ABCA6 p...    29   7.9  
AF373290-1|AAM77557.1| 1617|Homo sapiens ABC transporter ABCA6 p...    29   7.9  

>BC125232-1|AAI25233.1| 1500|Homo sapiens ABCA6 protein protein.
          Length = 1500

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +1

Query: 73   ILQMKYTIFYIQYS*L*LVTQRVAGSLVRDIAIPR*NTSLIFITYLV 213
            IL + Y IFYI+     L+T ++  +LV  I  P    SL+F  Y++
Sbjct: 1072 ILLLMYLIFYIENMQYLLITSQIVFALV--IVTPGYAASLVFFIYMI 1116


>BC125231-1|AAI25232.1| 1500|Homo sapiens ABCA6 protein protein.
          Length = 1500

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +1

Query: 73   ILQMKYTIFYIQYS*L*LVTQRVAGSLVRDIAIPR*NTSLIFITYLV 213
            IL + Y IFYI+     L+T ++  +LV  I  P    SL+F  Y++
Sbjct: 1072 ILLLMYLIFYIENMQYLLITSQIVFALV--IVTPGYAASLVFFIYMI 1116


>AY028898-1|AAK30023.1| 1617|Homo sapiens ATP-binding cassette A6
            protein.
          Length = 1617

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +1

Query: 73   ILQMKYTIFYIQYS*L*LVTQRVAGSLVRDIAIPR*NTSLIFITYLV 213
            IL + Y IFYI+     L+T ++  +LV  I  P    SL+F  Y++
Sbjct: 1072 ILLLMYLIFYIENMQYLLITSQIVFALV--IVTPGYAASLVFFIYMI 1116


>AK097296-1|BAC04994.1|  815|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39977 fis, clone SPLEN2029295, moderately
           similar to ATP-binding cassette, sub-family A member 8.
           ).
          Length = 815

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +1

Query: 73  ILQMKYTIFYIQYS*L*LVTQRVAGSLVRDIAIPR*NTSLIFITYLV 213
           IL + Y IFYI+     L+T ++  +LV  I  P    SL+F  Y++
Sbjct: 270 ILLLMYLIFYIENMQYLLITSQIVFALV--IVTPGYAASLVFFIYMI 314


>AF373328-1|AAM77558.1| 1617|Homo sapiens ABC transporter ABCA6
            protein.
          Length = 1617

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +1

Query: 73   ILQMKYTIFYIQYS*L*LVTQRVAGSLVRDIAIPR*NTSLIFITYLV 213
            IL + Y IFYI+     L+T ++  +LV  I  P    SL+F  Y++
Sbjct: 1072 ILLLMYLIFYIENMQYLLITSQIVFALV--IVTPGYAASLVFFIYMI 1116


>AF373290-1|AAM77557.1| 1617|Homo sapiens ABC transporter ABCA6
            protein.
          Length = 1617

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +1

Query: 73   ILQMKYTIFYIQYS*L*LVTQRVAGSLVRDIAIPR*NTSLIFITYLV 213
            IL + Y IFYI+     L+T ++  +LV  I  P    SL+F  Y++
Sbjct: 1072 ILLLMYLIFYIENMQYLLITSQIVFALV--IVTPGYAASLVFFIYMI 1116


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,590,716
Number of Sequences: 237096
Number of extensions: 1739771
Number of successful extensions: 2655
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2655
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)