Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30438
         (540 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071223-1|AAL48845.1|  157|Drosophila melanogaster RE26473p pro...    30   1.8  
AE014134-347|AAF51298.1|  157|Drosophila melanogaster CG15382-PA...    30   1.8  
AF247761-1|AAF74192.1| 1671|Drosophila melanogaster kinesin supe...    28   9.4  
AE013599-2336|AAM70884.1| 1670|Drosophila melanogaster CG8566-PD...    28   9.4  

>AY071223-1|AAL48845.1|  157|Drosophila melanogaster RE26473p
           protein.
          Length = 157

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 22/67 (32%), Positives = 28/67 (41%)
 Frame = -3

Query: 457 HRYLQRKCAIHLEI*ALRSQYSYNSCPTLQTETHYCSTAEISRVVVPTRADSQDVLPPVI 278
           H  L+ + A  L +  LR QY    C  + T T  CS      V   T    Q V PPV 
Sbjct: 30  HSALELEAAAALLL--LRYQYDRQVCNNIITYTESCSPTPPPAVADNTTPKDQTVRPPVA 87

Query: 277 TQIIALR 257
           +Q +  R
Sbjct: 88  SQPLKKR 94


>AE014134-347|AAF51298.1|  157|Drosophila melanogaster CG15382-PA
           protein.
          Length = 157

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 22/67 (32%), Positives = 28/67 (41%)
 Frame = -3

Query: 457 HRYLQRKCAIHLEI*ALRSQYSYNSCPTLQTETHYCSTAEISRVVVPTRADSQDVLPPVI 278
           H  L+ + A  L +  LR QY    C  + T T  CS      V   T    Q V PPV 
Sbjct: 30  HSALELEAAAALLL--LRYQYDRQVCNNIITYTESCSPTPPPAVADNTTPKDQTVRPPVA 87

Query: 277 TQIIALR 257
           +Q +  R
Sbjct: 88  SQPLKKR 94


>AF247761-1|AAF74192.1| 1671|Drosophila melanogaster kinesin
            superfamily member DUnc104 protein.
          Length = 1671

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +1

Query: 313  G*VPPPCLFLPWSSNAF-RFEG-WGSCCNYTETLELISQGGWRIYV 444
            G  P   L +P    +F RFE  W S  + +  L  +SQGG  IY+
Sbjct: 1204 GLFPGEALEVPGDDRSFYRFEAAWDSSLHNSALLNRVSQGGETIYI 1249


>AE013599-2336|AAM70884.1| 1670|Drosophila melanogaster CG8566-PD
            protein.
          Length = 1670

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +1

Query: 313  G*VPPPCLFLPWSSNAF-RFEG-WGSCCNYTETLELISQGGWRIYV 444
            G  P   L +P    +F RFE  W S  + +  L  +SQGG  IY+
Sbjct: 1203 GLFPGEALEVPGDDRSFYRFEAAWDSSLHNSALLNRVSQGGETIYI 1248


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,698,526
Number of Sequences: 53049
Number of extensions: 502270
Number of successful extensions: 1070
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1070
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)