Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30437
(745 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory recept... 26 0.28
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 26 0.37
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 26 0.37
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 26 0.37
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 26 0.37
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 24 1.5
AJ888865-1|CAI61930.1| 108|Tribolium castaneum modulator of act... 22 4.5
AJ622939-1|CAF22091.1| 108|Tribolium castaneum ETS activity mod... 22 4.5
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 21 7.9
>AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory receptor
candidate 41 protein.
Length = 398
Score = 26.2 bits (55), Expect = 0.28
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = -2
Query: 318 IIYLNILYDLETFFYCLVKIVYTQRSFVSIVSILQALSQLLNIPLVSFCPFCNNHFLINM 139
++Y+ ILY LE+ Y + K+V +F+ + + Q+ I + C +N LI
Sbjct: 268 VVYVLILYILESLLYMVTKLVVV--TFLKFIKKI----QIFGIMITKACMSASN--LIQR 319
Query: 138 TLNL 127
T N+
Sbjct: 320 TPNI 323
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 25.8 bits (54), Expect = 0.37
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 587 AIKIKSYQYLRQNKIPGYFHTFLLNCFTCKLN 682
A +I ++ N IP F F+L CFTCK N
Sbjct: 938 AFQIDNWTSFYYNIIPILF--FMLVCFTCKSN 967
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -1
Query: 229 CKHSSGTKPTFKHSLGVFLS 170
C S KP F H L VF +
Sbjct: 154 CFFKSSKKPAFSHFLIVFFT 173
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 25.8 bits (54), Expect = 0.37
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 587 AIKIKSYQYLRQNKIPGYFHTFLLNCFTCKLN 682
A +I ++ N IP F F+L CFTCK N
Sbjct: 938 AFQIDNWTSFYYNIIPILF--FMLVCFTCKSN 967
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -1
Query: 229 CKHSSGTKPTFKHSLGVFLS 170
C S KP F H L VF +
Sbjct: 154 CFFKSSKKPAFSHFLIVFFT 173
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 25.8 bits (54), Expect = 0.37
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 587 AIKIKSYQYLRQNKIPGYFHTFLLNCFTCKLN 682
A +I ++ N IP F F+L CFTCK N
Sbjct: 938 AFQIDNWTSFYYNIIPILF--FMLVCFTCKSN 967
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -1
Query: 229 CKHSSGTKPTFKHSLGVFLS 170
C S KP F H L VF +
Sbjct: 154 CFFKSSKKPAFSHFLIVFFT 173
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 25.8 bits (54), Expect = 0.37
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 587 AIKIKSYQYLRQNKIPGYFHTFLLNCFTCKLN 682
A +I ++ N IP F F+L CFTCK N
Sbjct: 938 AFQIDNWTSFYYNIIPILF--FMLVCFTCKSN 967
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -1
Query: 229 CKHSSGTKPTFKHSLGVFLS 170
C S KP F H L VF +
Sbjct: 154 CFFKSSKKPAFSHFLIVFFT 173
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -2
Query: 174 CPFCNNHFLINMTLNLHVYRH 112
CP CN F+ + L HV H
Sbjct: 377 CPICNKRFMRSDHLAKHVKTH 397
>AJ888865-1|CAI61930.1| 108|Tribolium castaneum modulator of
activity of ets genes protein.
Length = 108
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +2
Query: 11 KILHCDFNLRVCLSL 55
K+L+ DF LR+C +L
Sbjct: 89 KLLYKDFQLRLCAAL 103
>AJ622939-1|CAF22091.1| 108|Tribolium castaneum ETS activity
modulator protein.
Length = 108
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +2
Query: 11 KILHCDFNLRVCLSL 55
K+L+ DF LR+C +L
Sbjct: 89 KLLYKDFQLRLCAAL 103
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = +3
Query: 195 LKVGLVPEECLQLRQSFFECKR 260
+ VG+V C + Q FF+ +
Sbjct: 372 IAVGIVGSACTDVEQKFFQVSK 393
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,064
Number of Sequences: 336
Number of extensions: 3451
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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