Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30436
(736 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical pr... 58 5e-09
Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical p... 58 5e-09
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 32 0.37
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 32 0.37
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 32 0.37
U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical pr... 31 0.85
U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical pr... 31 0.85
Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical ... 30 1.5
AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical ... 30 1.5
Z99709-5|CAB16860.1| 246|Caenorhabditis elegans Hypothetical pr... 29 3.4
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p... 28 6.0
>Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 58.4 bits (135), Expect = 5e-09
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +2
Query: 467 EKGSNSEKA-DFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLT 643
++ +SEK + A+E G+GRF L + G+ ++ M+++ +S I P+ C+ ++
Sbjct: 58 QRSPDSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGIS 117
Query: 644 TQTKGWLNSIIFIGMMVGAYAWGSVADSLGR 736
+ + + + +F GMM+ + WG + D GR
Sbjct: 118 SVQQALVTTCVFSGMMLSSTFWGKICDRFGR 148
>Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 58.4 bits (135), Expect = 5e-09
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +2
Query: 467 EKGSNSEKA-DFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLT 643
++ +SEK + A+E G+GRF L + G+ ++ M+++ +S I P+ C+ ++
Sbjct: 58 QRSPDSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGIS 117
Query: 644 TQTKGWLNSIIFIGMMVGAYAWGSVADSLGR 736
+ + + + +F GMM+ + WG + D GR
Sbjct: 118 SVQQALVTTCVFSGMMLSSTFWGKICDRFGR 148
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 32.3 bits (70), Expect = 0.37
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = -2
Query: 528 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLGP 349
P P SS S S SG+ G+T S+ + PG S + T + P
Sbjct: 118 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 174
Query: 348 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 250
GS T+ G ++ YG + +S + G+ +TNS
Sbjct: 175 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 207
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 32.3 bits (70), Expect = 0.37
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = -2
Query: 528 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLGP 349
P P SS S S SG+ G+T S+ + PG S + T + P
Sbjct: 325 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 381
Query: 348 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 250
GS T+ G ++ YG + +S + G+ +TNS
Sbjct: 382 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 414
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 32.3 bits (70), Expect = 0.37
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = -2
Query: 528 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLGP 349
P P SS S S SG+ G+T S+ + PG S + T + P
Sbjct: 325 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 381
Query: 348 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 250
GS T+ G ++ YG + +S + G+ +TNS
Sbjct: 382 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 414
>U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical
protein F23F12.3 protein.
Length = 522
Score = 31.1 bits (67), Expect = 0.85
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 659 WLNSIIFIGMMVGAYAWGSVADSLGR 736
W+ +I FIG +VGA +G + D GR
Sbjct: 98 WIATIQFIGALVGALVYGHLGDHFGR 123
>U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical
protein F23F12.13 protein.
Length = 528
Score = 31.1 bits (67), Expect = 0.85
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +2
Query: 659 WLNSIIFIGMMVGAYAWGSVADSLGR 736
W+ +I FIG+++GA +G + D GR
Sbjct: 98 WVATIQFIGVLIGAITYGHLGDHFGR 123
>Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical
protein F09A5.1 protein.
Length = 483
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/69 (20%), Positives = 32/69 (46%)
Frame = +2
Query: 530 RFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWLNSIIFIGMMVGAYAW 709
R Y+ + + +V+ +D +++ +LP Q ++ G + ++ I M+G+
Sbjct: 5 RKDYISIVILFVVNLINNVDRYTIAGVLPDVQSYYNINDSMGGMIQTVFLISFMIGSPIC 64
Query: 710 GSVADSLGR 736
G + D R
Sbjct: 65 GYLGDRFNR 73
>Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
Frame = +2
Query: 656 GWLNSII----FIGMMVGAYAWGSVADSLGR 736
GW+ + + FIG M+G++ G +AD +GR
Sbjct: 143 GWIRATVQAVYFIGQMIGSFTCGVMADKIGR 173
>Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
Frame = +2
Query: 656 GWLNSII----FIGMMVGAYAWGSVADSLGR 736
GW+ + + FIG M+G++ G +AD +GR
Sbjct: 109 GWIRATVQAVYFIGQMIGSFTCGVMADKIGR 139
>AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
Frame = +2
Query: 656 GWLNSII----FIGMMVGAYAWGSVADSLGR 736
GW+ + + FIG M+G++ G +AD +GR
Sbjct: 143 GWIRATVQAVYFIGQMIGSFTCGVMADKIGR 173
>AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
Frame = +2
Query: 656 GWLNSII----FIGMMVGAYAWGSVADSLGR 736
GW+ + + FIG M+G++ G +AD +GR
Sbjct: 109 GWIRATVQAVYFIGQMIGSFTCGVMADKIGR 139
>Z99709-5|CAB16860.1| 246|Caenorhabditis elegans Hypothetical
protein C47B2.5 protein.
Length = 246
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +2
Query: 503 RAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWL 664
R EL G G +A CGL STS E+ V+ F L ++ Q + L
Sbjct: 188 RGSELIGAGMVVNDWVAFCGLDSTSTELSVVESIFKLGEQGAPTSISNQLRDTL 241
>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
protein R11G1.1 protein.
Length = 1656
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 205 VETDPGPKNPHSKLYAVGSATTPSERRLSVPATTIQSRPPA*D 333
V+T P P + S + S+T S SVP TT+++ P D
Sbjct: 587 VKTTPTPSSGTSTIVTENSSTFESVSTSSVPTTTVKTGDPQVD 629
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,335,839
Number of Sequences: 27780
Number of extensions: 411082
Number of successful extensions: 1062
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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