Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30433
(711 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11) 31 1.2
SB_1649| Best HMM Match : ANF_receptor (HMM E-Value=1.2e-05) 31 1.2
SB_52432| Best HMM Match : NDUF_B7 (HMM E-Value=0.47) 30 1.6
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 30 1.6
SB_32869| Best HMM Match : Toxin_7 (HMM E-Value=3.9) 30 2.1
SB_42234| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_37708| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_41870| Best HMM Match : DUF963 (HMM E-Value=0.22) 28 6.5
SB_14156| Best HMM Match : Neuromodulin (HMM E-Value=1) 28 8.6
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 28 8.6
>SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11)
Length = 2024
Score = 30.7 bits (66), Expect = 1.2
Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 1/133 (0%)
Frame = +2
Query: 32 YTKLYKKENKTKSEINDTPIPFS-LTNNSLPAGKSTLNSTSVGQSTLDQLSSDYPDDLKQ 208
YT + +++ K +++ S L++ S K V + L +L S+Y L+
Sbjct: 143 YTAVMEEKKKVEAQHKAMTEKISQLSSTSETEMKKIREENVVVKRKLSELESNYKTSLEN 202
Query: 209 VNNVGSGLKNMNSEAVIQESQITTSQIVFDEVLGKELVLGAELSTLIGIEKPNLMRTVED 388
V + + + ++N+E ESQ T ++ L + E L + + ++ D
Sbjct: 203 VKELQAKVIDVNAEVAKWESQYNTVNKQKRQLENDILSMRKEFGPLREVHETSIHHL--D 260
Query: 389 TGELQIQNSLKTI 427
E+++Q SL I
Sbjct: 261 NVEVELQGSLNKI 273
>SB_1649| Best HMM Match : ANF_receptor (HMM E-Value=1.2e-05)
Length = 481
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/73 (32%), Positives = 35/73 (47%)
Frame = +2
Query: 173 QLSSDYPDDLKQVNNVGSGLKNMNSEAVIQESQITTSQIVFDEVLGKELVLGAELSTLIG 352
+LS+ D K+ NN SGL NMNS + +S +T + + D + V S +
Sbjct: 270 ELSTYKALDRKKRNNDRSGLPNMNSSYFLYDSVLTFAHALDDVIKSGRWV---SYSPVHN 326
Query: 353 IEKPNLMRTVEDT 391
+EK TV DT
Sbjct: 327 VEKSKNAITVLDT 339
>SB_52432| Best HMM Match : NDUF_B7 (HMM E-Value=0.47)
Length = 1250
Score = 30.3 bits (65), Expect = 1.6
Identities = 34/99 (34%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Frame = +2
Query: 296 DEVLGKELVLGAELSTLIGIEKPNLMRTVED--TGELQIQNSLKTIPLRSSPTSSLKIES 469
D++L L+LG L T I N TV D +LQ+ L L + P S+ +
Sbjct: 790 DDILTWSLLLGVRLETRI-----NECCTVNDCFNEQLQLAPPLSGKVLNTRPLSTPVFVA 844
Query: 470 PGLPLVGTVRDSEINGKILEVAKNDPAAEISNRKNSKDG 586
GLP + SE NG+ LE N+ A IS+ NS G
Sbjct: 845 VGLPSLAYKDASEYNGE-LEAHDNN-AHCISSSVNSITG 881
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +2
Query: 56 NKTKSEINDTPIPFSLTNNSLPAGKSTLNSTSVGQSTLDQLSSDYPD-DLKQVNNVGSGL 232
N+ S +D+ S TNNS ++ NSTS S D L+SD P+ D +N SG
Sbjct: 320 NQDNSNSDDSKPDNSNTNNSNSDNSNSDNSTS-DNSNPDNLTSDNPNTDNSGSDNSSSG- 377
Query: 233 KNMNSE 250
N NS+
Sbjct: 378 -NFNSD 382
>SB_32869| Best HMM Match : Toxin_7 (HMM E-Value=3.9)
Length = 910
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = +2
Query: 158 QSTLDQLSSDYPDDLKQVNNVGSGLKNMN-SEAVIQESQITTSQIVFDEVLGKELVLGAE 334
+S ++ + S D + QV V G++ S+ + + + I D + +++ LG
Sbjct: 322 KSYVESVVSFLHDVVPQVQAVTGGVQRAEESKERVVWVKFEKADINDDTLSQEDVTLGTP 381
Query: 335 LSTLIGIEKPNLMRTVEDTGELQIQNSLKTIPLR 436
L ++G M TV TGE Q SL+ P+R
Sbjct: 382 LVLILGYPNGFQMWTVSSTGEAQEVLSLRQGPVR 415
>SB_42234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/84 (26%), Positives = 36/84 (42%)
Frame = +2
Query: 68 SEINDTPIPFSLTNNSLPAGKSTLNSTSVGQSTLDQLSSDYPDDLKQVNNVGSGLKNMNS 247
SE D P ++LP G +S S G D L + PD L+ N + GL+ +
Sbjct: 160 SEKTDAPPNGPEKTSTLPNGPKKNDSLSNGPEKSDVLLNAVPDGLENDNALLDGLEKITQ 219
Query: 248 EAVIQESQITTSQIVFDEVLGKEL 319
+++ V ++LG E+
Sbjct: 220 P---MSKDVSSMDCVDSKLLGNEI 240
>SB_37708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 587 TPTLKIFVDSQPKVRLYSEPTV 652
T T K+FV PK+ L+ EPTV
Sbjct: 605 TSTTKLFVTDPPKITLHPEPTV 626
>SB_41870| Best HMM Match : DUF963 (HMM E-Value=0.22)
Length = 233
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = -1
Query: 633 NRTFGCESTKIFSVGVPSFEFFRLLISAAGSFLATSKIFPLISESRTV 490
+R+ S + + G+PSF R +++ + S LATS+ +++ SR+V
Sbjct: 50 SRSVLATSRSVLATGLPSFTTSRYILATSRSVLATSR--SVLATSRSV 95
>SB_14156| Best HMM Match : Neuromodulin (HMM E-Value=1)
Length = 462
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +2
Query: 8 HFNEATQSYTKLYKKENKTKSEINDTPIPFSLTNNSLPAGKSTLNSTSVGQ 160
H E T+S K+E T + +P SLTN ++ N+TS GQ
Sbjct: 356 HGQEITESLGN--KQEKNTSPRHDQENVPQSLTNKTVTLSLELENTTSPGQ 404
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 27.9 bits (59), Expect = 8.6
Identities = 23/106 (21%), Positives = 43/106 (40%)
Frame = +2
Query: 20 ATQSYTKLYKKENKTKSEINDTPIPFSLTNNSLPAGKSTLNSTSVGQSTLDQLSSDYPDD 199
A + L E K++ E+ ++ + + ++ LN+ S L + D+
Sbjct: 1759 ARKRLATLETTERKSEEELAKANHEIQVSKDEISRLETELNAAKKRASCLQVDYENVRDE 1818
Query: 200 LKQVNNVGSGLKNMNSEAVIQESQITTSQIVFDEVLGKELVLGAEL 337
L + + + N IQE +T+ Q+ DE K VL E+
Sbjct: 1819 LAETRRALAEAEEKNVSLSIQEELVTSKQL--DEARDKIFVLKEEI 1862
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,242,196
Number of Sequences: 59808
Number of extensions: 368893
Number of successful extensions: 930
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1877743452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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