Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30433
(711 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g28770.1 68416.m03591 expressed protein 31 0.57
At2g24370.1 68415.m02912 protein kinase family protein contains ... 31 0.57
At1g28260.2 68414.m03469 expressed protein 31 1.00
At1g28260.1 68414.m03468 expressed protein 31 1.00
At4g33650.1 68417.m04780 dynamin-like protein 2a (ADL2a) identic... 30 1.3
At3g20620.1 68416.m02609 F-box family protein-related contains w... 29 2.3
At3g05900.1 68416.m00664 neurofilament protein-related similar t... 29 3.0
At4g39190.1 68417.m05549 expressed protein ; expression support... 29 4.0
At4g17000.1 68417.m02564 hypothetical protein 29 4.0
At4g04220.1 68417.m00598 disease resistance family protein conta... 28 5.3
At3g54190.1 68416.m05990 expressed protein GTP-binding regulator... 28 5.3
At3g21340.1 68416.m02695 leucine-rich repeat protein kinase, put... 28 5.3
At3g18770.1 68416.m02382 expressed protein 28 5.3
At1g75100.1 68414.m08722 expressed protein low similarity to SP|... 28 5.3
At4g35380.1 68417.m05026 guanine nucleotide exchange family prot... 28 7.0
At1g69630.1 68414.m08010 F-box family protein contains F-box dom... 28 7.0
At5g45410.1 68418.m05580 expressed protein similar to unknown pr... 27 9.3
At4g14760.1 68417.m02271 M protein repeat-containing protein con... 27 9.3
At4g00820.1 68417.m00113 calmodulin-binding protein-related cont... 27 9.3
At3g55600.1 68416.m06175 expressed protein predicted proteins, A... 27 9.3
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 31.5 bits (68), Expect = 0.57
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 5/146 (3%)
Frame = +2
Query: 155 GQSTLDQLSSDYPDDLKQVNNV--GSGLKNMNSEAV--IQESQIT-TSQIVFDEVLGKEL 319
G +++ L + +DLK+ NNV K N E V E ++ + + D + K L
Sbjct: 234 GDVSMENLQGNKVEDLKEGNNVVENGETKENNGENVESNNEKEVEGQGESIGDSAIEKNL 293
Query: 320 VLGAELSTLIGIEKPNLMRTVEDTGELQIQNSLKTIPLRSSPTSSLKIESPGLPLVGTVR 499
++ + + K + E+ GE Q N + TI + ++E G ++
Sbjct: 294 ESKEDVKSEVEAAKNDGSSMTENLGEAQGNNGVSTI------DNEKEVEGQG----ESIE 343
Query: 500 DSEINGKILEVAKNDPAAEISNRKNS 577
DS+I K LE +K D +E+ KN+
Sbjct: 344 DSDIE-KNLE-SKEDVKSEVEAAKNA 367
>At2g24370.1 68415.m02912 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 816
Score = 31.5 bits (68), Expect = 0.57
Identities = 37/160 (23%), Positives = 65/160 (40%), Gaps = 8/160 (5%)
Frame = +2
Query: 185 DYPDDLKQVNNVGSGLKNMNSEAVIQESQITTSQIVFDEVLGKELVLGAELSTLIGIEK- 361
DY L Q +N G +MNS + + +++ D+V + L EL + +
Sbjct: 310 DYSSSLDQSSNYGRRSVDMNSPTDFESERFSSASQSIDDVEAEMRRLKLELKQTMEMYST 369
Query: 362 --PNLMRTVEDTGELQ---IQNSLKTIPLRSSPTSSLKI-ESPGLPLVGTVRDSEINGKI 523
+ + ELQ ++ K R++ ++L I E + +E +I
Sbjct: 370 ACKEALTAKQKATELQRWKLEEERKLEEARNAEEAALAIAEKEKAKSKAAMEAAEAAQRI 429
Query: 524 LEV-AKNDPAAEISNRKNSKDGTPTLKIFVDSQPKVRLYS 640
E+ AK AE+ K S++ T L +S + R YS
Sbjct: 430 AELEAKKRVNAEMKALKESEEKTKALTALANSDVRYRKYS 469
>At1g28260.2 68414.m03469 expressed protein
Length = 880
Score = 30.7 bits (66), Expect = 1.00
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 347 IGIEKPNLMRTVEDTGELQIQNSLKTIPLRSSPTSSLKIESPGLPLV 487
+G+ KPN + +++TG + +SL P SS +P PL+
Sbjct: 670 LGLSKPNGLGPIDETGPVSAFDSLSINSSTEHPASSYSPPTPSAPLL 716
>At1g28260.1 68414.m03468 expressed protein
Length = 880
Score = 30.7 bits (66), Expect = 1.00
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 347 IGIEKPNLMRTVEDTGELQIQNSLKTIPLRSSPTSSLKIESPGLPLV 487
+G+ KPN + +++TG + +SL P SS +P PL+
Sbjct: 670 LGLSKPNGLGPIDETGPVSAFDSLSINSSTEHPASSYSPPTPSAPLL 716
>At4g33650.1 68417.m04780 dynamin-like protein 2a (ADL2a) identical
to dynamin like protein 2a (ADL2a) [Arabidopsis
thaliana] GI:19032337; supported by cDNA gi:19032336
Length = 808
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +2
Query: 77 NDTPIPFSLTNNSLPAGKSTLNSTSVGQSTLDQLSSDYPDDLKQVNNVGS 226
+ TP P S T N+ P G S + + Q QL S L QV VGS
Sbjct: 18 SSTPSPSSSTTNAAPLGSSVIPIVNKLQDIFAQLGSQSTIALPQVVVVGS 67
>At3g20620.1 68416.m02609 F-box family protein-related contains weak
hit to TIGRFAM TIGR01640 : F-box protein interaction
domain; similar to F-box protein family, AtFBX8
(GI:20197464) [Arabidopsis thaliana]
Length = 391
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = -1
Query: 615 ESTKIFSVGVPSFEFFRLLISAAGSFLATSKIFPLISESRTVPTNGNPGDSIF 457
+ T + G PSFEF + A GS ++ K++ + + +P P + +
Sbjct: 130 KETLLLPQGTPSFEFEPSIGVAYGSDVSDYKVYRIFCTGKIIPEERGPAEGFY 182
>At3g05900.1 68416.m00664 neurofilament protein-related similar to
NF-180 (GI:632549) [Petromyzon marinus] similar to
Neurofilament triplet H protein (200 kDa neurofilament
protein) (Neurofilament heavy polypeptide) (NF-H)
(Swiss-Prot:P12036) [Homo sapiens]
Length = 673
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 555 SAAGSFLATSKIFPLISESRTVPTNGNPGDSIFRLDV 445
S +GS L + +I I ES T P GD+ + +DV
Sbjct: 308 SESGSALCSEEILSTIQESNTDPIKETEGDASYPIDV 344
>At4g39190.1 68417.m05549 expressed protein ; expression supported
by MPSS
Length = 277
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +2
Query: 14 NEATQSYTKLYKKENKTKSEINDTPIPFSLTNNSLPAGKSTLNSTSVGQSTLDQLS 181
NEA QS T+ KEN+ K I ++ + S+T K ++ V QS ++L+
Sbjct: 133 NEAKQSITENKAKENEEKQSITESRVKKSVTEKKT---KRIISEKKVKQSKPEKLT 185
>At4g17000.1 68417.m02564 hypothetical protein
Length = 674
Score = 28.7 bits (61), Expect = 4.0
Identities = 43/187 (22%), Positives = 78/187 (41%), Gaps = 6/187 (3%)
Frame = +2
Query: 59 KTKSEINDTPIPFSLTNNSLPA-GKSTLNSTSVGQSTLDQLSSDYPDDLKQVNNVGSGLK 235
K + + + P+P S + G + TS + L + S+ D + N + + L+
Sbjct: 284 KKRVKKKEDPVPSSDPLKPYDSNGMEVEDKTSRDEELLVENKSEELSDTSKAN-MNNQLQ 342
Query: 236 NMNSEAVIQESQITTSQ-IVFDEVLGKELVLGAELSTLIGIEKPNLMRTV--EDTGELQI 406
AVI+ES + TSQ E+ KE L +E E N++ + ED +++
Sbjct: 343 AREDPAVIKESGLATSQKYQITEIEEKESALASECEDK---ENANIVAAIDKEDIAVIKV 399
Query: 407 QNSLKTIPLRSSPTSSLKIESPGLPLVGTVRDSEINGKIL--EVAKNDPAAEISNRKNSK 580
K + T ++ + LPL +++ N + E K + +A +NR +
Sbjct: 400 SGLDKA---KQCETVEIEDKENALPLECEKKENATNATDVDREDDKENSSALDNNRNLDQ 456
Query: 581 DGTPTLK 601
P LK
Sbjct: 457 ATYPLLK 463
>At4g04220.1 68417.m00598 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-2A [Lycopersicon
pimpinellifolium] gi|3894389|gb|AAC78594
Length = 811
Score = 28.3 bits (60), Expect = 5.3
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Frame = +2
Query: 98 SLTNNSLPAGKSTLNSTSVGQSTLDQLSSDYPDDLKQVNNVGSGLKNMNSEAVIQESQIT 277
++ N+S+P+ S L + LSS PDD+ + N+ + +MN + S I
Sbjct: 212 NMFNSSIPSSVSRLTKLKTIDLQNNFLSSKIPDDIGNLVNLSTLSLSMNKLSGGIPSSIH 271
Query: 278 TSQIVFDEVLGKELVLGAEL--STLIGIEKPNLMRTVEDTGELQIQNSLKTIP 430
+ + L L E+ + L G++K ++R +E +LQ N+ P
Sbjct: 272 NLKNLETLQLENNNGLSGEIPAAWLFGLQKLKVLR-LEGNNKLQWNNNGYVFP 323
>At3g54190.1 68416.m05990 expressed protein GTP-binding regulatory
protein beta chain, Dictyostelium discoideum, PIR:A47370
Length = 467
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 431 LRSSPTSSLKI-ESPGLPLVGTVRDSEINGKILEVAKNDPAAEISNRKN 574
LR P + + ES L G V ++NGK+L + D ++ + KN
Sbjct: 167 LRGQPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSVYKVFDLKN 215
>At3g21340.1 68416.m02695 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 880
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 131 STLNSTSVGQSTLDQLSSDYPDDLKQVNNVGSGLKNMNSEAVIQES 268
S LN +S + T+ Q+ + + L N G +NMNSE+ I+ S
Sbjct: 823 SCLNPSSARRPTMSQVVIELNECLSYENARGGTSQNMNSESSIEVS 868
>At3g18770.1 68416.m02382 expressed protein
Length = 625
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/90 (20%), Positives = 41/90 (45%)
Frame = +2
Query: 20 ATQSYTKLYKKENKTKSEINDTPIPFSLTNNSLPAGKSTLNSTSVGQSTLDQLSSDYPDD 199
A + ++ KK + +++++ P +NN+ PAG + S+ S + S D
Sbjct: 532 AVGALVRMLKKAPPLRQDVSESSRPEICSNNNKPAGAHEIAVASITASGIALASKTTADA 591
Query: 200 LKQVNNVGSGLKNMNSEAVIQESQITTSQI 289
L+++ + K M + ++ +S S +
Sbjct: 592 LEELRS----YKEMKNHLLLGQSTSNPSSV 617
>At1g75100.1 68414.m08722 expressed protein low similarity to
SP|O14976 Cyclin G-associated kinase (EC 2.7.1.-) {Homo
sapiens}
Length = 651
Score = 28.3 bits (60), Expect = 5.3
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Frame = +2
Query: 23 TQSYT---KLYKKENKTKSEINDTPIPFSLTNNSLPAGKSTLNSTSVGQSTLDQLSSDYP 193
T+S+T + KK TKS ++ +PIP + S A S + VG+ + SD+
Sbjct: 365 TRSFTEDSRTKKKSQGTKSSLDSSPIP----DKSSFASSSA--APEVGKDGVKGKVSDFV 418
Query: 194 DDLKQVNNVGSGLKNMNSEAVIQESQITTSQIVFDEVLGKELV 322
+ +VG+G +++ + + + + I+ D KE V
Sbjct: 419 KIFSKGASVGAGGESLGQSSRWRAKETPKTDIIHDGSNAKETV 461
>At4g35380.1 68417.m05026 guanine nucleotide exchange family protein
similar to guanine nucleotide exchange factor [Homo
sapiens] GI:5456754; contains Pfam profile PF01369: Sec7
domain
Length = 1706
Score = 27.9 bits (59), Expect = 7.0
Identities = 21/90 (23%), Positives = 48/90 (53%)
Frame = +2
Query: 158 QSTLDQLSSDYPDDLKQVNNVGSGLKNMNSEAVIQESQITTSQIVFDEVLGKELVLGAEL 337
+S LD+L S PDD ++V SGL ++++V+Q + + + + +V+ L +L
Sbjct: 41 KSVLDKLES-LPDDFHDPSSVVSGLAASDADSVLQPF-LLSLETAYSKVVEPSLDCAFKL 98
Query: 338 STLIGIEKPNLMRTVEDTGELQIQNSLKTI 427
+L I + + + +D+ ++ N++ +
Sbjct: 99 FSL-SILRGEIQSSKQDSILFKLVNAVSKV 127
>At1g69630.1 68414.m08010 F-box family protein contains F-box domain
Pfam:PF00646
Length = 451
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -1
Query: 117 KLLLVRENGIGVSLISDLVLFSFLYNLVYD 28
K ++R +G+S I D+++FS ++YD
Sbjct: 289 KRTMIRNFLLGISTIKDMIIFSSTLEVIYD 318
>At5g45410.1 68418.m05580 expressed protein similar to unknown
protein (pir||T05524)
Length = 342
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 549 AGSFLATSKIFPLISESRTVP 487
A SF A SK+ PLIS++ T+P
Sbjct: 154 AKSFRAASKVMPLISKALTLP 174
>At4g14760.1 68417.m02271 M protein repeat-containing protein
contains Pfam profile: PF02370 M protein repeat
Length = 1676
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 47 KKENKTKSEINDTPIPFSLTNNSL 118
K+EN+ SEINDT I + N +
Sbjct: 459 KEENRNLSEINDTSISLEIQKNEI 482
>At4g00820.1 68417.m00113 calmodulin-binding protein-related
contains Pfam profile PF00612: IQ calmodulin-binding
motif
Length = 534
Score = 27.5 bits (58), Expect = 9.3
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = +2
Query: 8 HFNEATQSYTKLYKKENKT----KSEINDTPIPFSLTNNSLPAGKSTLNSTSVGQSTLDQ 175
H NE + K KKE + KS +D+P+ S PA KST +T + + L
Sbjct: 32 HGNEVDEDEDK--KKEKRRWLFRKSTNHDSPVKTSGVGKDAPAQKSTETTTIINPTVLSS 89
Query: 176 LSSDYPD 196
++ D
Sbjct: 90 VTEQRYD 96
>At3g55600.1 68416.m06175 expressed protein predicted proteins,
Arabidopsis thaliana
Length = 240
Score = 27.5 bits (58), Expect = 9.3
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 9/103 (8%)
Frame = +2
Query: 344 LIGIEKP--NLMRTVEDTGELQIQNSLK--TIPLRSSPTSSLKIESP-GLPLVGTVRDSE 508
++GI K NL R + Q Q+ L LR + ++P GLP V + +E
Sbjct: 1 MMGISKTEINLRRLLSAAPNQQNQSKLMHYVATLREQLEQLSEEKTPEGLPRVTKAKVNE 60
Query: 509 INGKI----LEVAKNDPAAEISNRKNSKDGTPTLKIFVDSQPK 625
KI ++A +P E+S+ +KD T ++ +P+
Sbjct: 61 YYEKIEAVASKIASQEPETEVSDEPFAKDSTSGSSPKIEDEPR 103
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,639,263
Number of Sequences: 28952
Number of extensions: 266323
Number of successful extensions: 802
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1535986264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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