Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30430
         (688 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    24   5.2  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    24   5.2  
AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse t...    23   9.0  

>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +2

Query: 545 WYTSFSCYFYQVFFCFRKPNVRVYNS--KYETSVY 643
           WY + +  F+ +  CF   NV +Y+S  ++  +VY
Sbjct: 321 WYAAVTQVFFSLTICF--GNVMMYSSYNRFHNNVY 353


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +2

Query: 545 WYTSFSCYFYQVFFCFRKPNVRVYNS--KYETSVY 643
           WY + +  F+ +  CF   NV +Y+S  ++  +VY
Sbjct: 321 WYAAVTQVFFSLTICF--GNVMMYSSYNRFHNNVY 353


>AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 134

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +2

Query: 74  SLQTVCQLQEYQRDTRVQGVVYRYKGAAVLWSNKRFDSVW 193
           SL T  QL     +        +  G A+L + K FDS+W
Sbjct: 43  SLSTTHQLHRVTNNIVHNRCNRKSTGLALLDTEKAFDSIW 82


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,108
Number of Sequences: 2352
Number of extensions: 12655
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)