Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30430
         (688 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            25   0.89 
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    25   0.89 
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    24   1.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.7  
AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    21   8.3  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    21   8.3  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   8.3  

>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 552 VYQLKKKERKRTRKQN 505
           V+QLKKK RK+   QN
Sbjct: 3   VHQLKKKRRKKNLNQN 18


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 18  VDEILYATDDLNALLDFSYRCKQSVSFKSINETQE 122
           V + L   D+L+  L FSY   ++ SF   NET++
Sbjct: 93  VRDFLNGLDNLHEYLKFSYPRMRAPSFICENETRQ 127


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 564 QEKDVYQLKKKERKRTRKQNPISKINYRLK 475
           Q ++VY L+  ++KRTR +  +S  N   K
Sbjct: 231 QWEEVYILQNLQKKRTRAEGRLSSDNMSKK 260



 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 117 QEYKVSFIDIKVQPFFGPTN 176
           QE K SF+  ++Q  F PT+
Sbjct: 33  QEVKQSFLKNQLQALFQPTD 52


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 190 NGVEAFVGPKNGCTFISINDTL 125
           +GV+ F+ P NG   +  N+ L
Sbjct: 126 DGVQIFIAPNNGAVKVLANEFL 147


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 190 NGVEAFVGPKNGCTFISINDTL 125
           +GV+ F+ P NG   +  N+ L
Sbjct: 164 DGVQIFIAPNNGAVKVLANEFL 185


>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 117 QEYKVSFIDIKVQPFFGPTN 176
           QE K SF+  ++Q  F PT+
Sbjct: 33  QEVKQSFLKNQLQALFQPTD 52


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 117 QEYKVSFIDIKVQPFFGPTN 176
           QE K SF+  ++Q  F PT+
Sbjct: 33  QEVKQSFLKNQLQALFQPTD 52


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 311 GFNVHHGHDAIEGYGQQYEHNEQTGPDG 228
           G  +HHG     G+ + YE   Q G  G
Sbjct: 152 GTTLHHGMAYHRGHRKDYERWVQQGAFG 179


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,181
Number of Sequences: 438
Number of extensions: 3678
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)