Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30429
(757 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58684| Best HMM Match : AMP-binding (HMM E-Value=0.36) 44 1e-04
SB_2184| Best HMM Match : AMP-binding (HMM E-Value=8.5e-06) 42 7e-04
SB_1655| Best HMM Match : Wzy_C (HMM E-Value=3.9) 35 0.062
SB_25806| Best HMM Match : DUF159 (HMM E-Value=0.37) 34 0.11
SB_48304| Best HMM Match : AMP-binding (HMM E-Value=0) 34 0.14
SB_50949| Best HMM Match : AMP-binding (HMM E-Value=0) 33 0.19
SB_33495| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_1852| Best HMM Match : WD40 (HMM E-Value=1.7) 31 1.3
SB_54885| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_7991| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_27856| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_54490| Best HMM Match : AMP-binding (HMM E-Value=4.2039e-45) 30 2.3
SB_37281| Best HMM Match : AMP-binding (HMM E-Value=3.78351e-44) 30 2.3
SB_46285| Best HMM Match : DM (HMM E-Value=4.7) 29 3.1
SB_51101| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24) 29 4.1
SB_35866| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34) 29 4.1
SB_31957| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_30263| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_5639| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_34931| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.46) 28 7.1
SB_53246| Best HMM Match : AMP-binding (HMM E-Value=7.8e-37) 28 9.4
SB_16214| Best HMM Match : AMP-binding (HMM E-Value=0) 28 9.4
>SB_58684| Best HMM Match : AMP-binding (HMM E-Value=0.36)
Length = 237
Score = 44.0 bits (99), Expect = 1e-04
Identities = 39/176 (22%), Positives = 79/176 (44%), Gaps = 4/176 (2%)
Frame = +1
Query: 229 INGSTGESFTNEQILKRAVSIARSIMARGAA-GNNIMVVMRNHQNLFSIYWSLLLSGALP 405
I+ +TG+SFT ++ ++ RGA G+ + V++ N + + L G
Sbjct: 1 IDSATGKSFTFSELCTLIRKCGSVLVRRGAQIGDTMAVILPNMIEYPVVCYGALSVGMRV 60
Query: 406 FMMDPSTTVYELSYFLQLLEPSIVFCDREYYNDIKKSLDDLPDLKTEAYICN---EDDLL 576
++P TV E+ L+ + + + E + + ++ ++ + + L
Sbjct: 61 TTLNPQYTVREMVPQLKDSQANYIITTPELIHQVNQAAAKCSCVRRVFVLADTPGHQTLY 120
Query: 577 EDFINGHSNDIDSFRIPEGNPEDTILLLPTSGSTGLPKAVLLPNRGNSCSSTYVLD 744
+ +N + S +P +D +L +SG+TGLPK VLL + N S+ +L+
Sbjct: 121 DQILNDDGSAFPS-HVPVNWKQDVAYILYSSGTTGLPKGVLLTHY-NLISAVVILN 174
>SB_2184| Best HMM Match : AMP-binding (HMM E-Value=8.5e-06)
Length = 757
Score = 41.5 bits (93), Expect = 7e-04
Identities = 32/169 (18%), Positives = 73/169 (43%), Gaps = 1/169 (0%)
Frame = +1
Query: 196 CLKKRPNATNMINGSTGESFTNEQILKRAVSIARSIMARGAAGNNIMVVMRNHQNLFSIY 375
C K+ + +++G TGE++T ++ +++ G ++ ++ + + +Y
Sbjct: 454 CCKRNGDKEALVDGPTGETYTYTDLITLIKKCGSALLQAGVKPKDVALLHLPNIMQYPVY 513
Query: 376 -WSLLLSGALPFMMDPSTTVYELSYFLQLLEPSIVFCDREYYNDIKKSLDDLPDLKTEAY 552
+ GA+ +P TV EL+Y L + D + Y+ +++ E +
Sbjct: 514 LYGAQAIGAVVTTANPGYTVDELAYQLIDSSAKYIITDSKLYH---TAIEAARKANVE-H 569
Query: 553 ICNEDDLLEDFINGHSNDIDSFRIPEGNPEDTILLLPTSGSTGLPKAVL 699
+ + D + + + P +P + I + +SG+TG+ K VL
Sbjct: 570 VFESVEFFNDLLKDDGSKLKGVYSPT-DPTEAICMPYSSGTTGVSKGVL 617
>SB_1655| Best HMM Match : Wzy_C (HMM E-Value=3.9)
Length = 194
Score = 35.1 bits (77), Expect = 0.062
Identities = 33/162 (20%), Positives = 77/162 (47%), Gaps = 5/162 (3%)
Frame = +1
Query: 220 TNMINGSTGESFTNEQILKRAVSIARSIMARGAAGNNIMVVMRNHQNLFSI-YWSLLLSG 396
T M++ ++G S+T ++ + +++ +G +++ V+ + + I ++ + G
Sbjct: 35 TAMVDSTSGRSYTYNKLTEMIKKCGSALIRQGLQTKDMVAVLLPNMPEYPIVFYGVTSVG 94
Query: 397 ALPFMMDPSTTVYELSYFLQLLEPSIVFCDREYYNDIKKSLDD--LPDLKTEAYICNEDD 570
+ ++P+ T E+ Y L+ + + K++ D + + T Y+
Sbjct: 95 GIVTTINPAYTTDEIIYQLKDSGAKYLVTVPQLAQKAKQAADQAGVKRIYTFGYVDGCKS 154
Query: 571 LLEDFINGHSNDIDSFRIPEG-NPEDTILLLP-TSGSTGLPK 690
L D + H +D S+ + N ++ ++ LP +SG+TGLPK
Sbjct: 155 LF-DLL--HEDDGGSYPVSVSVNWKEDVVCLPYSSGTTGLPK 193
>SB_25806| Best HMM Match : DUF159 (HMM E-Value=0.37)
Length = 563
Score = 34.3 bits (75), Expect = 0.11
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 82 NASQLYLDEVLNEILAAKGVVPDAKERDRLILAEIAFHCLKKRPNATNMINGSTGESFT- 258
N +Q LDE E+ A + A RD+ L + A C +K NAT +I+G GE
Sbjct: 58 NVAQAQLDEKQKELDAVQAKYDQAM-RDKQTLVDDAEACRRKMANATALIDGLGGEKIRW 116
Query: 259 NEQILKRAVSIARSI 303
EQ K I R +
Sbjct: 117 TEQSKKFDQQIQRLV 131
>SB_48304| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 374
Score = 33.9 bits (74), Expect = 0.14
Identities = 27/158 (17%), Positives = 68/158 (43%), Gaps = 1/158 (0%)
Frame = +1
Query: 229 INGSTGESFTNEQILKRAVSIARSIMARGAAGNNIMVVMRNHQNLFSIY-WSLLLSGALP 405
++G TGE+FT ++ +++ G +++++ +++Y + G +
Sbjct: 1 VDGPTGETFTYTDLITLTKKCGSAMLRAGVTPKDVVLLHLPSIMQYAVYLYGAQAMGGVV 60
Query: 406 FMMDPSTTVYELSYFLQLLEPSIVFCDREYYNDIKKSLDDLPDLKTEAYICNEDDLLEDF 585
+P + EL+Y + + + + + Y+ +++ E ++ ++ +D
Sbjct: 61 STANPGYSADELAYQVTDCDAKYIITNSKLYH---TAIEAARKANVE-HVFVSEEFFKDV 116
Query: 586 INGHSNDIDSFRIPEGNPEDTILLLPTSGSTGLPKAVL 699
+ + + P E T L +SG+TGL K V+
Sbjct: 117 LEDDGSALTGIYCPSDTTE-TACLPYSSGTTGLSKGVM 153
>SB_50949| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 569
Score = 33.5 bits (73), Expect = 0.19
Identities = 45/207 (21%), Positives = 87/207 (42%), Gaps = 17/207 (8%)
Frame = +1
Query: 145 PDAKERDRLILAEIAFHCLKKRPNATNMI---NGSTGESFTNEQILKRAVSIARSIMARG 315
P + L ++ H K PN +I + + T + ++ ++A ++ +G
Sbjct: 10 PHTTPLEHRTLFQLLDHHAAKCPNKEALIYRDDSGNRTALTFREYKDQSQALAAGLLEKG 69
Query: 316 AA-GNNIMVVMRNHQNLFSIYWSLLLSGALPFM--MDPSTTVYEL-----SYFLQLLEPS 471
G+ ++V++ N I +L GA+P +D + E+ F +
Sbjct: 70 LRRGDRVLVLLSNSVEFAVILLALTRLGAVPLFVELDVDDAILEMRGQVSGVFYTEQDSK 129
Query: 472 IVFCDREYYN-DIKKSL-----DDLPDLKTEAYICNEDDLLEDFINGHSNDIDSFRIPEG 633
++ E + +IK L D++P+ K + + D LL+ F + + E
Sbjct: 130 VITAVTEVLDSEIKIFLCIGSHDNMPNHKK---VHSYDALLQSFQDDDITQLHQAET-EV 185
Query: 634 NPEDTILLLPTSGSTGLPKAVLLPNRG 714
+D L++ TSGSTG PK +L + G
Sbjct: 186 QFDDPALVIFTSGSTGRPKPILYTHHG 212
>SB_33495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 33.5 bits (73), Expect = 0.19
Identities = 33/163 (20%), Positives = 72/163 (44%), Gaps = 8/163 (4%)
Frame = +1
Query: 244 GESFTNEQILKRAVSIARSIMARG-AAGNNIMVVMRNHQNLFSIYWSLLLSGALPFMMDP 420
G+S+T ++ + A IA ++G A G+ I +++ N I+ L G + +++
Sbjct: 107 GKSWTFKEADEFANRIANYFKSQGYAKGDVIALILENRPEFILIWLGLSKIGVISALINT 166
Query: 421 STTVYELSYFLQLLEPSIVFCDREYYNDIKKSLDDLPDLKTEAYICNEDD-------LLE 579
+ L + + + + + + + D LP+ + C+ ++ +
Sbjct: 167 NLHQDSLLHCISAANSKAIIFGSNFADSVVEIQDKLPE--NMLFYCHGNNGNSAIPAVSL 224
Query: 580 DFINGHSNDIDSFRIPEGNPEDTILLLPTSGSTGLPKAVLLPN 708
D S+ + + + D ++ + TSG+TGLPKA L+ N
Sbjct: 225 DQTLRDSSPKKAVHSHQKSHLDVLMYIYTSGTTGLPKAALIRN 267
>SB_1852| Best HMM Match : WD40 (HMM E-Value=1.7)
Length = 513
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 640 EDTILLLPTSGSTGLPKAVLLPNRG 714
ED ++L TSGSTG PK ++ N G
Sbjct: 461 EDPFVVLFTSGSTGRPKPIMYTNHG 485
>SB_54885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2988
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 138 CRSRCKRAG*IDISRNCFPLSKETTKRHKHD 230
CRS C R S+ CFPLS+++TK +D
Sbjct: 97 CRSNCTR------SKQCFPLSRDSTKGSPYD 121
>SB_7991| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 561
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 640 EDTILLLPTSGSTGLPKAVLLPNRGNSCSSTY 735
+D L++ TSGSTG+PK + N G SS +
Sbjct: 191 DDHALVIFTSGSTGIPKPIQFTNHGFVNSSIF 222
>SB_27856| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 277
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 496 YNDIKKSLDDLPDLKTEAYICNEDDLLEDFINGHSNDIDSF 618
Y+D + D+ D E Y DD EDF NGH +D + +
Sbjct: 64 YDDDDEDYDNGHDDDDEDYDNGHDDDYEDFDNGHDDDDEDY 104
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 496 YNDIKKSLDDLPDLKTEAYICNEDDLLEDFINGHSNDID 612
Y+D + D+ D E Y DD EDF NGH +D D
Sbjct: 17 YDDDDEDYDNGYDDDDEDYDNGHDDEDEDFDNGHDDDDD 55
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 484 DREYYNDIKKSLDDLPDLKTEAYICNEDDLLEDFINGHSNDID 612
D + +D + D+ D + E Y DD EDF NGH +D D
Sbjct: 183 DNGHDDDDDEDYDNGHDDEDEDYDNGHDDDDEDFDNGHDDDDD 225
>SB_54490| Best HMM Match : AMP-binding (HMM E-Value=4.2039e-45)
Length = 565
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1
Query: 637 PEDTILLLPTSGSTGLPKAV 696
PED + ++ TSGSTG PKAV
Sbjct: 194 PEDPVAVVFTSGSTGEPKAV 213
>SB_37281| Best HMM Match : AMP-binding (HMM E-Value=3.78351e-44)
Length = 393
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 640 EDTILLLPTSGSTGLPKAVLLPNRG 714
ED + +L TSGSTG PK VL + G
Sbjct: 16 EDPLFMLYTSGSTGKPKGVLHTHGG 40
>SB_46285| Best HMM Match : DM (HMM E-Value=4.7)
Length = 233
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +1
Query: 562 EDDLLEDFINGHSNDIDSFRIPEGNPEDTILLLPTSGSTGLPKAVLLPNRGNSCSSTYV 738
+DD ++ + +ND D +G+ +D+I+ + + V LPNRG+S S T+V
Sbjct: 119 DDDNNDNNKDDDNNDDDDNN--DGDDDDSIIYFCIFVAKRIKYIVTLPNRGHSSSCTFV 175
>SB_51101| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 640 EDTILLLPTSGSTGLPKAVLLPNRG 714
+D L++ TSGSTG PK L ++G
Sbjct: 175 DDPFLIIHTSGSTGKPKPALYTHQG 199
>SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24)
Length = 467
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -3
Query: 164 SRSFASGTTPLAANISFNTSSR 99
SR +SGT+P++ N SF+T+S+
Sbjct: 436 SRGISSGTSPVSTNSSFSTNSK 457
>SB_35866| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34)
Length = 758
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 439 LSYFLQLLEPSIVFCDREYYNDIKKSLDDLPDLKTEAY-ICNEDDLLEDFINGHSNDIDS 615
LS ++LLE I+ EY I++ ++ DL+ E + NE+ +LED + +
Sbjct: 425 LSERIELLEKEILDMRVEYEGQIRELQNENLDLRKECLELDNENKILEDEV----KQLSE 480
Query: 616 FRIPEGNPED 645
PEGN D
Sbjct: 481 GSTPEGNDLD 490
>SB_31957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 538
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 640 EDTILLLPTSGSTGLPKAVLLPNRGNSCSSTYVLDVSHE 756
+D I+++ TSGSTG PK V +CS D+S +
Sbjct: 167 DDPIVIVYTSGSTGSPKLVQHTCFSRTCSVLTWKDISQD 205
>SB_30263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 976
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 640 EDTILLLPTSGSTGLPKAVLLPNRG 714
ED + LL TSGSTG PK ++ G
Sbjct: 264 EDPLFLLYTSGSTGQPKGIVHTQAG 288
>SB_5639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1384
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 646 TILLLPTSGSTGLPKAVLLPNRGNSCSST 732
TI++LP S G+P A+++ + + C S+
Sbjct: 333 TIIILPVSKCPGIPPAIMVKCKDSDCGSS 361
>SB_34931| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.46)
Length = 572
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/74 (22%), Positives = 27/74 (36%)
Frame = +1
Query: 211 PNATNMINGSTGESFTNEQILKRAVSIARSIMARGAAGNNIMVVMRNHQNLFSIYWSLLL 390
PN T M+ S S N + SI +IMA A+ + + + +
Sbjct: 154 PNTTRMVTSSISSSTVNVSAISTTSSIESTIMASVASSIQLNITSNTTMAVNDTLRTTST 213
Query: 391 SGALPFMMDPSTTV 432
S P + PS +
Sbjct: 214 SAVFPTTITPSPNI 227
>SB_53246| Best HMM Match : AMP-binding (HMM E-Value=7.8e-37)
Length = 497
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 640 EDTILLLPTSGSTGLPKAVLLPNRGNSCSSTYVLDVS 750
+D +++ TSGSTGLPK V + +C+ D +
Sbjct: 147 DDPAVIIFTSGSTGLPKLVQHTSHTLACAQVLSKDTA 183
>SB_16214| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 549
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 640 EDTILLLPTSGSTGLPKAVLLPNRGNSCSSTYVLDVS 750
+D +++ TSGSTGLPK V + +C+ D +
Sbjct: 177 DDPAVIIFTSGSTGLPKLVQHTSHTLACAQVLSKDTA 213
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,051,548
Number of Sequences: 59808
Number of extensions: 508183
Number of successful extensions: 1404
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1391
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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