Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30429
         (757 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    24   1.3  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              23   4.1  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    23   4.1  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   9.4  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   9.4  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   9.4  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   9.4  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 652 LLLPTSGSTGLPKAVLLPNRGNSC 723
           ++ PTSG+TG+  A+    RG  C
Sbjct: 101 IIEPTSGNTGIGLAMAAAVRGYKC 124


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
 Frame = +1

Query: 469 SIVFCDREYYNDIKKSLDDLPDLKTEAYICNEDDLLEDFIN-GHSNDIDSFRI 624
           S+  C+    + ++ S+        E Y C E  L E  I   H  D D  ++
Sbjct: 65  SVTKCEGFCNSQVQPSVASTTGFSKECYCCRESYLKERHITLHHCYDADGIKL 117


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
 Frame = +1

Query: 469 SIVFCDREYYNDIKKSLDDLPDLKTEAYICNEDDLLEDFIN-GHSNDIDSFRI 624
           S+  C+    + ++ S+        E Y C E  L E  I   H  D D  ++
Sbjct: 65  SVTKCEGFCNSQVQPSVASTTGFSKECYCCRESYLKERHITLHHCYDADGIKL 117


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 550 YICNEDDLLEDFINGHSND 606
           YIC +   L++ ++G +ND
Sbjct: 227 YICEDMRFLDEPLSGETND 245


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 676 WIHLWVVIILYPLDSL 629
           WIH W+ ++   LD+L
Sbjct: 542 WIHPWLPLLRNRLDTL 557


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 550 YICNEDDLLEDFINGHSND 606
           YIC +   L++ ++G +ND
Sbjct: 227 YICEDMRFLDEPLSGETND 245


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 713 PLFGKSTALGSPVDPLVGSNNIVSSGFPSG 624
           P+    T L  P D +V + N+V SG   G
Sbjct: 517 PVTVNLTKLHPPADLVVYACNVVGSGLSHG 546


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,808
Number of Sequences: 438
Number of extensions: 5030
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)