Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30429
(757 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g21240.1 68416.m02684 4-coumarate--CoA ligase 2 / 4-coumaroyl... 56 2e-08
At5g63380.1 68418.m07955 4-coumarate--CoA ligase family protein ... 55 4e-08
At3g21230.1 68416.m02683 4-coumarate--CoA ligase, putative / 4-c... 46 2e-05
At1g51680.2 68414.m05823 4-coumarate--CoA ligase 1 / 4-coumaroyl... 46 3e-05
At1g51680.1 68414.m05822 4-coumarate--CoA ligase 1 / 4-coumaroyl... 46 3e-05
At1g76290.1 68414.m08860 AMP-dependent synthetase and ligase fam... 44 8e-05
At1g65060.2 68414.m07376 4-coumarate--CoA ligase 3 / 4-coumaroyl... 44 1e-04
At1g65060.1 68414.m07375 4-coumarate--CoA ligase 3 / 4-coumaroyl... 44 1e-04
At1g68270.1 68414.m07798 AMP-dependent synthetase and ligase fam... 43 2e-04
At1g20510.2 68414.m02556 4-coumarate--CoA ligase family protein ... 43 2e-04
At1g20510.1 68414.m02555 4-coumarate--CoA ligase family protein ... 43 2e-04
At1g62940.1 68414.m07107 4-coumarate--CoA ligase family protein ... 42 4e-04
At4g14070.1 68417.m02172 AMP-binding protein, putative similar t... 35 0.051
At4g19010.1 68417.m02802 4-coumarate--CoA ligase family protein ... 35 0.067
At1g21530.1 68414.m02693 AMP-binding protein, putative strong si... 34 0.089
At1g77240.1 68414.m08996 AMP-binding protein, putative strong si... 33 0.15
At1g20480.1 68414.m02552 4-coumarate--CoA ligase family protein ... 33 0.20
At1g77590.1 68414.m09034 long-chain-fatty-acid--CoA ligase famil... 33 0.27
At1g21540.1 68414.m02694 AMP-binding protein, putative strong si... 33 0.27
At3g26680.2 68416.m03336 DNA cross-link repair protein-related c... 32 0.36
At3g26680.1 68416.m03335 DNA cross-link repair protein-related c... 32 0.36
At1g64400.1 68414.m07299 long-chain-fatty-acid--CoA ligase, puta... 32 0.36
At3g23790.1 68416.m02990 AMP-binding protein, putative similar t... 32 0.47
At4g11030.1 68417.m01794 long-chain-fatty-acid--CoA ligase, puta... 31 0.83
At5g27600.1 68418.m03305 AMP-binding protein, putative similar t... 31 1.1
At1g49430.1 68414.m05541 long-chain-fatty-acid--CoA ligase / lon... 31 1.1
At5g44316.1 68418.m05426 ATP-binding-cassette transporter, putat... 30 1.4
At5g36880.1 68418.m04418 acetyl-CoA synthetase, putative / aceta... 30 1.4
At3g48990.1 68416.m05351 AMP-dependent synthetase and ligase fam... 30 1.9
At2g36490.1 68415.m04479 HhH-GPD base excision DNA repair family... 29 2.5
At1g30520.1 68414.m03734 acyl-activating enzyme 14 (AAE14) ident... 29 2.5
At1g04690.1 68414.m00466 potassium channel protein, putative nea... 29 2.5
At4g04770.1 68417.m00699 ATP-binding-cassette transporter (ABC1)... 29 3.3
At3g29791.1 68416.m03788 expressed protein 29 4.4
At5g60720.1 68418.m07619 expressed protein contains Pfam profile... 28 5.8
At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEME... 28 5.8
At3g01370.1 68416.m00059 expressed protein contains Pfam domain,... 28 5.8
At5g45410.1 68418.m05580 expressed protein similar to unknown pr... 28 7.7
At5g16370.1 68418.m01913 AMP-binding protein, putative similar t... 28 7.7
At5g09420.1 68418.m01091 chloroplast outer membrane translocon s... 28 7.7
At4g02190.1 68417.m00291 DC1 domain-containing protein contains ... 28 7.7
At3g59760.3 68416.m06669 cysteine synthase, mitochondrial, putat... 28 7.7
At3g59760.2 68416.m06668 cysteine synthase, mitochondrial, putat... 28 7.7
At3g59760.1 68416.m06667 cysteine synthase, mitochondrial, putat... 28 7.7
At3g46590.1 68416.m05057 telomere repeat-binding protein, putati... 28 7.7
At1g09840.3 68414.m01108 shaggy-related protein kinase kappa / A... 28 7.7
At1g09840.2 68414.m01107 shaggy-related protein kinase kappa / A... 28 7.7
At1g09840.1 68414.m01106 shaggy-related protein kinase kappa / A... 28 7.7
>At3g21240.1 68416.m02684 4-coumarate--CoA ligase 2 /
4-coumaroyl-CoA synthase 2 (4CL2) identical to SP|Q9S725
4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2)
(4-coumaroyl-CoA synthase 2) {Arabidopsis thaliana}
Length = 556
Score = 56.4 bits (130), Expect = 2e-08
Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 4/195 (2%)
Frame = +1
Query: 142 VPDAKERDRLILAEIAFHCLKKRPNATNMINGSTGESFTNEQILKRAVSIARSIMARGAA 321
+PD + L L + F + + +ING TGE +T + + +A + G
Sbjct: 27 LPDIYIPNHLPLHDYIFENISEFAAKPCLINGPTGEVYTYADVHVTSRKLAAGLHNLGVK 86
Query: 322 GNNI-MVVMRNHQNLFSIYWSLLLSGALPFMMDPSTTVYELSYFLQLLEPSIVFCDREYY 498
+++ M+++ N + + + GA+ +P T E+S + ++ Y
Sbjct: 87 QHDVVMILLPNSPEVVLTFLAASFIGAITTSANPFFTPAEISKQAKASAAKLIVTQSRYV 146
Query: 499 NDIKKSLDD-LPDLKTEAYICNEDDL-LEDFINGHSNDIDSFRIPEG-NPEDTILLLPTS 669
+ IK +D + + T++ E+ L + +DS IPE +PED + L +S
Sbjct: 147 DKIKNLQNDGVLIVTTDSDAIPENCLRFSELTQSEEPRVDS--IPEKISPEDVVALPFSS 204
Query: 670 GSTGLPKAVLLPNRG 714
G+TGLPK V+L ++G
Sbjct: 205 GTTGLPKGVMLTHKG 219
>At5g63380.1 68418.m07955 4-coumarate--CoA ligase family protein /
4-coumaroyl-CoA synthase family protein similar to 4CL2
[gi:12229665] from Arabidopsis thaliana, 4CL1
[gi:12229631] from Nicotiana tabacum; contains Pfam
AMP-binding enzyme domain PF00501
Length = 562
Score = 55.2 bits (127), Expect = 4e-08
Identities = 44/176 (25%), Positives = 88/176 (50%), Gaps = 3/176 (1%)
Frame = +1
Query: 220 TNMINGSTGESFTNEQILKRAVSIARSIMAR--GAAGNNIMVVMR-NHQNLFSIYWSLLL 390
T ++N S+G++ T ++L+R S+A S+ R A N+ ++ + ++ +Y +L+
Sbjct: 67 TYLVNSSSGDNLTYGELLRRVRSLAVSLRERFPSLASRNVAFILSPSSLDIPVLYLALMS 126
Query: 391 SGALPFMMDPSTTVYELSYFLQLLEPSIVFCDREYYNDIKKSLDDLPDLKTEAYICNEDD 570
G + +P + E+S+ +++ EP I F + ++ S L + + +
Sbjct: 127 IGVVVSPANPIGSESEVSHQVEVSEPVIAFATSQTVKKLQSS-----SLPLGTVLMDSTE 181
Query: 571 LLEDFINGHSNDIDSFRIPEGNPEDTILLLPTSGSTGLPKAVLLPNRGNSCSSTYV 738
L S+ ++ F++ + N D +L +SG+TG K VLL +R N +ST V
Sbjct: 182 FLSWLNRSDSSSVNPFQV-QVNQSDPAAILFSSGTTGRVKGVLLTHR-NLIASTAV 235
>At3g21230.1 68416.m02683 4-coumarate--CoA ligase, putative /
4-coumaroyl-CoA synthase, putative (4CL) similar to 4CL2
[gi:12229665] and 4CL1 [gi:12229649] from [Arabidopsis
thaliana], 4CL1 [gi:12229631] from Nicotiana tabacum
Length = 570
Score = 46.4 bits (105), Expect = 2e-05
Identities = 39/174 (22%), Positives = 75/174 (43%), Gaps = 7/174 (4%)
Frame = +1
Query: 214 NATNMINGSTGESFTNEQILKRAVSIARSIMARGAA-GNNIMVVMRNHQNLFSIYWSLLL 390
+ T +I+G+TG T + IA I G G+ +M+++ N + ++
Sbjct: 61 STTCIIDGATGRILTYADVQTNMRRIAAGIHRLGIRHGDVVMLLLPNSPEFALSFLAVAY 120
Query: 391 SGALPFMMDPSTTVYELSYFLQLLEPSIVFCDREYYNDIKKSLDD------LPDLKTEAY 552
GA+ +P T E++ + ++ + + + +D L D
Sbjct: 121 LGAVSTTANPFYTQPEIAKQAKASAAKMIITKKCLVDKLTNLKNDGVLIVCLDDDGDNGV 180
Query: 553 ICNEDDLLEDFINGHSNDIDSFRIPEGNPEDTILLLPTSGSTGLPKAVLLPNRG 714
+ + DD F D P+ +PEDT+ + +SG+TGLPK V++ ++G
Sbjct: 181 VSSSDDGCVSFTELTQADETELLKPKISPEDTVAMPYSSGTTGLPKGVMITHKG 234
>At1g51680.2 68414.m05823 4-coumarate--CoA ligase 1 /
4-coumaroyl-CoA synthase 1 (4CL1) identical to SP|Q42524
4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1)
(4-coumaroyl-CoA synthase 1) {Arabidopsis thaliana}
Length = 490
Score = 46.0 bits (104), Expect = 3e-05
Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 10/210 (4%)
Frame = +1
Query: 115 NEILAAKGVVPDAKERDRLILAEIAFHCLKKRPNATNMINGSTGESFTNEQILKRAVSIA 294
N + + +PD + L L + F + + +ING TG +T + + IA
Sbjct: 20 NSDVIFRSKLPDIYIPNHLSLHDYIFQNISEFATKPCLINGPTGHVYTYSDVHVISRQIA 79
Query: 295 RSIMARGAAGNNI-MVVMRNHQNLFSIYWSLLLSGALPFMMDPSTTVYELSYFLQLLEPS 471
+ G N++ M+++ N + + GA +P T E++ +
Sbjct: 80 ANFHKLGVNQNDVVMLLLPNCPEFVLSFLAASFRGATATAANPFFTPAEIAKQAKASNTK 139
Query: 472 IVFCDREYYNDIKKSLDD-------LPDLKTEAYI--CNEDDLLEDFINGHSNDIDSFRI 624
++ + Y + IK +D + D ++ C L S IDS I
Sbjct: 140 LIITEARYVDKIKPLQNDDGVVIVCIDDNESVPIPEGCLRFTELTQSTTEASEVIDSVEI 199
Query: 625 PEGNPEDTILLLPTSGSTGLPKAVLLPNRG 714
+P+D + L +SG+TGLPK V+L ++G
Sbjct: 200 ---SPDDVVALPYSSGTTGLPKGVMLTHKG 226
>At1g51680.1 68414.m05822 4-coumarate--CoA ligase 1 /
4-coumaroyl-CoA synthase 1 (4CL1) identical to SP|Q42524
4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1)
(4-coumaroyl-CoA synthase 1) {Arabidopsis thaliana}
Length = 561
Score = 46.0 bits (104), Expect = 3e-05
Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 10/210 (4%)
Frame = +1
Query: 115 NEILAAKGVVPDAKERDRLILAEIAFHCLKKRPNATNMINGSTGESFTNEQILKRAVSIA 294
N + + +PD + L L + F + + +ING TG +T + + IA
Sbjct: 20 NSDVIFRSKLPDIYIPNHLSLHDYIFQNISEFATKPCLINGPTGHVYTYSDVHVISRQIA 79
Query: 295 RSIMARGAAGNNI-MVVMRNHQNLFSIYWSLLLSGALPFMMDPSTTVYELSYFLQLLEPS 471
+ G N++ M+++ N + + GA +P T E++ +
Sbjct: 80 ANFHKLGVNQNDVVMLLLPNCPEFVLSFLAASFRGATATAANPFFTPAEIAKQAKASNTK 139
Query: 472 IVFCDREYYNDIKKSLDD-------LPDLKTEAYI--CNEDDLLEDFINGHSNDIDSFRI 624
++ + Y + IK +D + D ++ C L S IDS I
Sbjct: 140 LIITEARYVDKIKPLQNDDGVVIVCIDDNESVPIPEGCLRFTELTQSTTEASEVIDSVEI 199
Query: 625 PEGNPEDTILLLPTSGSTGLPKAVLLPNRG 714
+P+D + L +SG+TGLPK V+L ++G
Sbjct: 200 ---SPDDVVALPYSSGTTGLPKGVMLTHKG 226
>At1g76290.1 68414.m08860 AMP-dependent synthetase and ligase family
protein similar to AMP-binding protein GI:1903034 from
[Brassica napus]; contains Pfam AMP-binding domain
PF00501
Length = 546
Score = 44.4 bits (100), Expect = 8e-05
Identities = 40/170 (23%), Positives = 81/170 (47%), Gaps = 8/170 (4%)
Frame = +1
Query: 253 FTNEQILKRAVSIARSIMARGAAGNNIMVVMR-NHQNLFSIYWSLLLSGALPFMMDPSTT 429
+T Q R V +A ++ G + ++++ + N L +Y+ ++GA+ +++ +
Sbjct: 40 YTWHQTRDRCVRLASALSDLGLSRHDVVAALAPNVPALCELYFGAPMAGAVLCVLNTTFD 99
Query: 430 VYELSYFLQLLEPSIVFCDREYYNDIKKSLDDLPDLKTEAYICN------EDDLLEDFIN 591
L+ L+ +P + F D E+ + ++SL L +++ + I E E + +
Sbjct: 100 SQMLAMALEKTKPKVFFVDSEFLSVAEESLSLLSNIEEKPLIITITENPTEQSKYEQYED 159
Query: 592 GHSNDIDSFR-IPEGNPEDTILLLPTSGSTGLPKAVLLPNRGNSCSSTYV 738
S +F+ I + D I L TSG+T PK V+ +RG ++T V
Sbjct: 160 FLSTGNPNFKPIRPVDECDPIALNFTSGTTSTPKCVVYSHRGAYLNATAV 209
>At1g65060.2 68414.m07376 4-coumarate--CoA ligase 3 /
4-coumaroyl-CoA synthase 3 (4CL3) identical to SP|Q9S777
4-coumarate--CoA ligase 3 (EC 6.2.1.12) (4CL 3)
(4-coumaroyl-CoA synthase 3) {Arabidopsis thaliana}
Length = 495
Score = 44.0 bits (99), Expect = 1e-04
Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 1/191 (0%)
Frame = +1
Query: 142 VPDAKERDRLILAEIAFHCLKKRPNATNMINGSTGESFTNEQILKRAVSIARSIMARGAA 321
+PD + L L F L + +I GSTG+S+T + +A + G
Sbjct: 39 LPDIDIPNHLPLHTYCFEKLSSVSDKPCLIVGSTGKSYTYGETHLICRRVASGLYKLGIR 98
Query: 322 -GNNIMVVMRNHQNLFSIYWSLLLSGALPFMMDPSTTVYELSYFLQLLEPSIVFCDREYY 498
G+ IM++++N + + GA+ +P T EL L+ ++ +Y
Sbjct: 99 KGDVIMILLQNSAEFVFSFMGASMIGAVSTTANPFYTSQELYKQLKSSGAKLIITHSQYV 158
Query: 499 NDIKKSLDDLPDLKTEAYICNEDDLLEDFINGHSNDIDSFRIPEGNPEDTILLLPTSGST 678
+ +K ++L + T+ I + + G +D L +SG+T
Sbjct: 159 DKLKNLGENLTLITTDEPTPENCLPFSTLITDDETNPFQETVDIGG-DDAAALPFSSGTT 217
Query: 679 GLPKAVLLPNR 711
GLPK V+L ++
Sbjct: 218 GLPKGVVLTHK 228
>At1g65060.1 68414.m07375 4-coumarate--CoA ligase 3 /
4-coumaroyl-CoA synthase 3 (4CL3) identical to SP|Q9S777
4-coumarate--CoA ligase 3 (EC 6.2.1.12) (4CL 3)
(4-coumaroyl-CoA synthase 3) {Arabidopsis thaliana}
Length = 561
Score = 44.0 bits (99), Expect = 1e-04
Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 1/191 (0%)
Frame = +1
Query: 142 VPDAKERDRLILAEIAFHCLKKRPNATNMINGSTGESFTNEQILKRAVSIARSIMARGAA 321
+PD + L L F L + +I GSTG+S+T + +A + G
Sbjct: 39 LPDIDIPNHLPLHTYCFEKLSSVSDKPCLIVGSTGKSYTYGETHLICRRVASGLYKLGIR 98
Query: 322 -GNNIMVVMRNHQNLFSIYWSLLLSGALPFMMDPSTTVYELSYFLQLLEPSIVFCDREYY 498
G+ IM++++N + + GA+ +P T EL L+ ++ +Y
Sbjct: 99 KGDVIMILLQNSAEFVFSFMGASMIGAVSTTANPFYTSQELYKQLKSSGAKLIITHSQYV 158
Query: 499 NDIKKSLDDLPDLKTEAYICNEDDLLEDFINGHSNDIDSFRIPEGNPEDTILLLPTSGST 678
+ +K ++L + T+ I + + G +D L +SG+T
Sbjct: 159 DKLKNLGENLTLITTDEPTPENCLPFSTLITDDETNPFQETVDIGG-DDAAALPFSSGTT 217
Query: 679 GLPKAVLLPNR 711
GLPK V+L ++
Sbjct: 218 GLPKGVVLTHK 228
>At1g68270.1 68414.m07798 AMP-dependent synthetase and ligase family
protein similar to AMP-binding protein GI:1903034 from
[Brassica napus]; contains Pfam AMP-binding domain
PF00501
Length = 535
Score = 43.2 bits (97), Expect = 2e-04
Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 19/196 (9%)
Frame = +1
Query: 211 PNATNMINGSTGESFTNEQILKRAVSIARSIMARGAAGNNIM-VVMRNHQNLFSIYWSLL 387
PN T++I G T FT Q R +A S+++ A N+++ VV N ++ +++++
Sbjct: 28 PNRTSIIYGQT--RFTWPQTYDRCCRLAASLISLNIAKNDVVSVVAPNTPAIYEMHFAVP 85
Query: 388 LSGALPFMMDPSTTVYELSYFLQLLEPSIVFCDREYYNDIKK-----SLDDLP------- 531
++GA+ ++ ++ L+ +P I+F R + ++ S DDL
Sbjct: 86 MAGAVLNPINTRLDATSITTILRHAQPKILFIHRNFEPLAREILHLLSCDDLQLNLLVIF 145
Query: 532 --DLKTEAYICNEDDLLEDFIN-GHSNDI---DSFRIPEGNPEDTILLLPTSGSTGLPKA 693
+ + + +E+ E I G + FRI N +D I L TSG+T PK
Sbjct: 146 IDEYNSAKRVSSEELDYESLIQMGEPTSPLVENMFRIQ--NEQDPISLNYTSGTTADPKG 203
Query: 694 VLLPNRGNSCSSTYVL 741
V++ +RG +S V+
Sbjct: 204 VVISHRGAYLTSLGVI 219
>At1g20510.2 68414.m02556 4-coumarate--CoA ligase family protein /
4-coumaroyl-CoA synthase family protein similar to
SP|P14912 and SP|P14913 from Petroselinum crispum;
contains Pfam AMP-binding enzyme domain PF00501
Length = 473
Score = 43.2 bits (97), Expect = 2e-04
Identities = 34/163 (20%), Positives = 75/163 (46%), Gaps = 2/163 (1%)
Frame = +1
Query: 229 INGSTGESFTNEQILKRAVSIARSIMARGAAGNNIMVVMRNHQNLFSIYWSLLLS-GALP 405
I+ STG++ T ++ + S+A + G ++++++ + LF + ++S GA+
Sbjct: 50 IDASTGQNLTFTELWRAVESVADCLSEIGIRKGHVVLLLSPNSILFPVVCLSVMSLGAII 109
Query: 406 FMMDPSTTVYELSYFLQLLEPSIVFCDREYYNDIKKSLDDLPDLKTEAYICNEDDLLEDF 585
+P T E++ ++ P + F + I + LP + + + +
Sbjct: 110 TTTNPLNTSNEIAKQIKDSNPVLAFTTSQLLPKISAAAKKLPIVLMDEERVDSVGDVRRL 169
Query: 586 INGHSNDIDSFRIPEG-NPEDTILLLPTSGSTGLPKAVLLPNR 711
+ + R+ E + +DT LL +SG+TG+ K V+ +R
Sbjct: 170 VEMMKKEPSGNRVKERVDQDDTATLLYSSGTTGMSKGVISSHR 212
>At1g20510.1 68414.m02555 4-coumarate--CoA ligase family protein /
4-coumaroyl-CoA synthase family protein similar to
SP|P14912 and SP|P14913 from Petroselinum crispum;
contains Pfam AMP-binding enzyme domain PF00501
Length = 546
Score = 43.2 bits (97), Expect = 2e-04
Identities = 34/163 (20%), Positives = 75/163 (46%), Gaps = 2/163 (1%)
Frame = +1
Query: 229 INGSTGESFTNEQILKRAVSIARSIMARGAAGNNIMVVMRNHQNLFSIYWSLLLS-GALP 405
I+ STG++ T ++ + S+A + G ++++++ + LF + ++S GA+
Sbjct: 50 IDASTGQNLTFTELWRAVESVADCLSEIGIRKGHVVLLLSPNSILFPVVCLSVMSLGAII 109
Query: 406 FMMDPSTTVYELSYFLQLLEPSIVFCDREYYNDIKKSLDDLPDLKTEAYICNEDDLLEDF 585
+P T E++ ++ P + F + I + LP + + + +
Sbjct: 110 TTTNPLNTSNEIAKQIKDSNPVLAFTTSQLLPKISAAAKKLPIVLMDEERVDSVGDVRRL 169
Query: 586 INGHSNDIDSFRIPEG-NPEDTILLLPTSGSTGLPKAVLLPNR 711
+ + R+ E + +DT LL +SG+TG+ K V+ +R
Sbjct: 170 VEMMKKEPSGNRVKERVDQDDTATLLYSSGTTGMSKGVISSHR 212
>At1g62940.1 68414.m07107 4-coumarate--CoA ligase family protein /
4-coumaroyl-CoA synthase family protein similar to
gi:112801 from Petroselinum crispum, GB:AAD40664 from
[Solanum tuberosum] (J. Biol. Chem. 266 (13), 8551-8559
(1991)); contains Pfam AMP-binding enzyme domain PF00501
Length = 542
Score = 41.9 bits (94), Expect = 4e-04
Identities = 47/208 (22%), Positives = 88/208 (42%), Gaps = 7/208 (3%)
Frame = +1
Query: 133 KGVVPDAKERDRLILAEIAFHCLKKRPNATNMINGSTGESFTNEQILKRAVSIARSIMAR 312
+ + P D+L L E +++ + TG++ T +++ +A+++ +
Sbjct: 14 RSLYPSVPIPDKLTLPEFVLQGVEEYTENVAFVEAVTGKAVTYGDVVRDTKRLAKALTSL 73
Query: 313 GAAGNNIM-VVMRNHQNLFSIYWSLLLSGALPFMMDPSTTVYELSYFLQLLEPSIVFCDR 489
G +M VV+ N I ++ +G + +P+ V E+ ++ + D
Sbjct: 74 GLRKGQVMVVVLPNVAEYGIIALGIMSAGGVFSGANPTALVSEIKKQVEASGARGIITDA 133
Query: 490 EYYNDIKK---SLDDLPDLKTEAYICNEDDLLEDFINGHSNDIDSFRIPEGNPEDTILLL 660
Y +K + L + K E + N DLLE D D+ I + D L
Sbjct: 134 TNYEKVKSLGLPVIVLGEEKIEGAV-NWKDLLE--AGDKCGDTDNEEILQ---TDLCALP 187
Query: 661 PTSGSTGLPKAVLLPNR---GNSCSSTY 735
+SG+TGL K V+L +R N CS+ +
Sbjct: 188 FSSGTTGLQKGVMLTHRNLIANLCSTLF 215
>At4g14070.1 68417.m02172 AMP-binding protein, putative similar to
AMP-binding protein [gi:1617272] from Brassica napus;
contains Pfam AMP-binding enzyme domain PF00501;
identical to cDNA acyl-CoA synthetase-like protein
GI:20799730
Length = 727
Score = 35.1 bits (77), Expect = 0.051
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +1
Query: 598 SNDIDSFRIPEGNPEDTILLLPTSGSTGLPKAVLLPNR 711
SND S+R + +DT ++ TSG+TG PK V+L +R
Sbjct: 265 SNDTRSYRNQFIDSDDTAAIMYTSGTTGNPKGVMLTHR 302
>At4g19010.1 68417.m02802 4-coumarate--CoA ligase family protein /
4-coumaroyl-CoA synthase family protein similar to 4CL
from Pinus taeda, gi:515503, gi:1143308; contains Pfam
AMP-binding enzyme domain PF00501
Length = 566
Score = 34.7 bits (76), Expect = 0.067
Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 5/174 (2%)
Frame = +1
Query: 205 KRPNATNMINGSTGESFTNEQILKRAVSIARSIM-ARGAA-GNNIMVVMRNHQNLFSIYW 378
K T +I+ TG S ++ ++ S+A I G G+ + +V+ N I+
Sbjct: 57 KHHGDTALIDSLTGFSISHTELQIMVQSMAAGIYHVLGVRQGDVVSLVLPNSVYFPMIFL 116
Query: 379 SLLLSGALPFMMDPSTTVYELSYFLQLLEPSIVFCDREYYNDIKKSLDDLPDLKTEAYIC 558
SL+ GA+ M+PS+++ E+ + + F E + SL +E+Y
Sbjct: 117 SLISLGAIVTTMNPSSSLGEIKKQVSECSVGLAFTSTENVEKL-SSLGVSVISVSESY-- 173
Query: 559 NEDDLLEDFINGHSNDIDSFRI---PEGNPEDTILLLPTSGSTGLPKAVLLPNR 711
+ D + + +S +SF P +D ++ +SG+TG K VLL +R
Sbjct: 174 DFDSIRIENPKFYSIMKESFGFVPKPLIKQDDVAAIMYSSGTTGASKGVLLTHR 227
>At1g21530.1 68414.m02693 AMP-binding protein, putative strong
similarity to AMP-binding protein GI:1903034 from
[Brassica napus]; contains Pfam AMP-binding domain
PF00501; identical to cDNA adenosine monophosphate
binding protein 10 AMPBP10 (AMPBP10) GI:20799728
Length = 547
Score = 34.3 bits (75), Expect = 0.089
Identities = 38/166 (22%), Positives = 80/166 (48%), Gaps = 12/166 (7%)
Frame = +1
Query: 250 SFTNEQILKRAVSIARSIMARGAAGNNIMVVMRNHQNLFSIYWSLLLSGALPFMMDPSTT 429
S T+ + L+ A ++ S + G + VV N +++ + +++ +SGA+ ++P
Sbjct: 44 SETHNRCLRIASALTSSSIGI-KQGQVVSVVGPNVPSVYELQFAVPMSGAILNNINPRLD 102
Query: 430 VYELSYFLQLLEPSIVFCDREYYNDIKKSLDDLPDLKTEAYICNEDDLLEDFINGHSNDI 609
+ LS L+ E +VF D + + +++ + + +DD E+ + S+ +
Sbjct: 103 AHALSVLLRHSESRLVFVDHRSISLVLEAVSLFTQHEKPHLVLLDDD-QENDSSSASDFL 161
Query: 610 DSFR--IPEGN-------PE---DTILLLPTSGSTGLPKAVLLPNR 711
D++ + GN P+ ++L TSG+T PK V+L +R
Sbjct: 162 DTYEEIMERGNSRFKWIRPQTEWQPMVLNYTSGTTSSPKGVVLSHR 207
>At1g77240.1 68414.m08996 AMP-binding protein, putative strong
similarity to AMP-binding protein GI:1903034 from
[Brassica napus]; contains Pfam AMP-binding domain
PF00501
Length = 545
Score = 33.5 bits (73), Expect = 0.15
Identities = 29/129 (22%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 SFTNEQILKRAVSIARSIMARGAAGNNIMVVMRNHQNLFSIYWSLLLSGALPFMMDPSTT 429
S T+ + L+ A +++ + + G + V+ N +++ + +++ +SGA+ ++P
Sbjct: 43 SETHSRCLRIASTLSSASLGINR-GQVVSVIGPNVPSVYELQFAVPMSGAVLNNINPRLD 101
Query: 430 VYELSYFLQLLEPSIVFCDREYYNDIKKSLDDLP-DLKTEAYICNEDDLLEDFINGHSND 606
+ LS L+ E +VF D + + +++ LP D + I N+ + D + S D
Sbjct: 102 AHALSVLLRHSESKLVFVDHHSSSLVLEAVSFLPKDERPRLVILNDGN---DMPSSSSAD 158
Query: 607 IDSFRIPEG 633
+D EG
Sbjct: 159 MDFLDTYEG 167
>At1g20480.1 68414.m02552 4-coumarate--CoA ligase family protein /
4-coumaroyl-CoA synthase family protein similar to
SP|Q9S725 from Arabidopsis thaliana and SP|P17814 from
Oryza sativa; contains Pfam AMP-binding enzyme domain
PF00501
Length = 565
Score = 33.1 bits (72), Expect = 0.20
Identities = 37/173 (21%), Positives = 74/173 (42%), Gaps = 9/173 (5%)
Frame = +1
Query: 220 TNMINGSTGESFTNEQILKRAVSIARSIMARGAAGNNIMVVMRNHQNLFSIY-WSLLLSG 396
T ++ TG + ++ +A + A G N+++++ + LF I S++ G
Sbjct: 64 TVFVDAVTGRRLSFPELWLGVERVAGCLYALGVRKGNVVIILSPNSILFPIVSLSVMSLG 123
Query: 397 ALPFMMDPSTTVYELSYFLQLLEPSIVFCDREYYNDIKKSLD-DLPDLKTEAYICNEDD- 570
A+ +P T E+S + P + F + + + + + +LP + + Y
Sbjct: 124 AIITTANPINTSDEISKQIGDSRPVLAFTTCKLVSKLAAASNFNLPVVLMDDYHVPSQSY 183
Query: 571 -----LLEDFINGHSNDIDSFRIPEG-NPEDTILLLPTSGSTGLPKAVLLPNR 711
L+ + R+ + N +DT LL +SG+TG K V+L +R
Sbjct: 184 GDRVKLVGRLETMIETEPSESRVKQRVNQDDTAALLYSSGTTGTSKGVMLSHR 236
>At1g77590.1 68414.m09034 long-chain-fatty-acid--CoA ligase family
protein / long-chain acyl-CoA synthetase family protein
(LACS9) similar to LACS 3 [SP|O95573] from Homo Sapiens,
LACS 3 [SP|Q63151] from Rattus norvegicus; contains Pfam
HMM hit: AMP-binding enzymes PF00501
Length = 691
Score = 32.7 bits (71), Expect = 0.27
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 12/105 (11%)
Frame = +1
Query: 439 LSYFLQLLEPSIVFCDREYYNDIKKSLDDLPDLKT-EAYICNEDDLLEDFINGH---SND 606
L + L E + V C + ++KK +D L+T + IC +D+ D +N + ++
Sbjct: 170 LCHSLNETEVTTVICGSK---ELKKLMDISQQLETVKRVICMDDEFPSD-VNSNWMATSF 225
Query: 607 IDSFRIPEGNP--------EDTILLLPTSGSTGLPKAVLLPNRGN 717
D ++ NP D +++ TSGSTGLPK V++ GN
Sbjct: 226 TDVQKLGRENPVDPNFPLSADVAVIMYTSGSTGLPKGVMM-THGN 269
>At1g21540.1 68414.m02694 AMP-binding protein, putative strong
similarity to AMP-binding protein GI:1903034 from
[Brassica napus]; contains Pfam AMP-binding domain
PF00501; identical to cDNA adenosine monophosphate
binding protein 9 AMPBP9 (AMPBP9) GI:20799726
Length = 550
Score = 32.7 bits (71), Expect = 0.27
Identities = 36/168 (21%), Positives = 77/168 (45%), Gaps = 14/168 (8%)
Frame = +1
Query: 250 SFTNEQILKRAVSIARSIMARGAAGNNIMVVMRNHQNLFSIYWSLLLSGALPFMMDPSTT 429
S T+ + L+ A ++ S + G + VV N +++ + +++ +SGA+ ++P
Sbjct: 44 SETHNRCLRIASALTSSSLGINR-GQVVSVVGPNVPSVYELQFAVPMSGAILNNINPRLD 102
Query: 430 VYELSYFLQLLEPSIVFCDREYYNDIKKSLDDLPDLKTEAYICNEDD---------LLED 582
+ LS L+ E +VF D + + +++ + + + +DD D
Sbjct: 103 AHALSVLLRHSESKLVFVDPNSISVVLEAVSFMRQNEKPHLVLLDDDQEDGSLSPSAASD 162
Query: 583 FINGHSNDID--SFRIPEGNPE---DTILLLPTSGSTGLPKAVLLPNR 711
F++ + ++ R P+ ++L TSG+T PK V+L +R
Sbjct: 163 FLDTYQGVMERGDSRFKWIRPQTEWQPMILNYTSGTTSSPKGVVLSHR 210
>At3g26680.2 68416.m03336 DNA cross-link repair protein-related
contains weak similarity to Swiss-Prot:P30620 DNA
cross-LINK repair protein PSO2/SNM1 [Saccharomyces
cerevisiae]
Length = 484
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 665 QVDPLD-YLKLYSYRIGGIVAHLPTSWTYHTK 757
+V+ LD +LK+Y + G ++A PT WTY K
Sbjct: 384 KVERLDEHLKIYREQYGAVLAFRPTGWTYSEK 415
>At3g26680.1 68416.m03335 DNA cross-link repair protein-related
contains weak similarity to Swiss-Prot:P30620 DNA
cross-LINK repair protein PSO2/SNM1 [Saccharomyces
cerevisiae]
Length = 484
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 665 QVDPLD-YLKLYSYRIGGIVAHLPTSWTYHTK 757
+V+ LD +LK+Y + G ++A PT WTY K
Sbjct: 384 KVERLDEHLKIYREQYGAVLAFRPTGWTYSEK 415
>At1g64400.1 68414.m07299 long-chain-fatty-acid--CoA ligase,
putative / long-chain acyl-CoA synthetase, putative
similar to GI:1617270 (MF7P) from [Brassica napus]
Length = 665
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 616 FRIPEGNPEDTILLLPTSGSTGLPKAVLLPN 708
+ +PE D ++ TSG+TG PK VLL N
Sbjct: 215 YELPEKRRSDVCTIMYTSGTTGDPKGVLLTN 245
>At3g23790.1 68416.m02990 AMP-binding protein, putative similar to
AMP-binding protein GB:CAA96521 from [Brassica napus]
(Plant Mol. Biol. (1997) 33 (5), 911-922); contains Pfam
AMP-binding enzyme domain PF00501; identical to cDNA
acyl-CoA synthetase-like protein GI:20799732
Length = 722
Score = 31.9 bits (69), Expect = 0.47
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 598 SNDIDSFRIPEGNPEDTILLLPTSGSTGLPKAVLLPNR 711
SND + +P+D ++ TSG+TG PK V+L ++
Sbjct: 249 SNDSGKYEYEYIDPDDIATIMYTSGTTGNPKGVMLTHQ 286
>At4g11030.1 68417.m01794 long-chain-fatty-acid--CoA ligase,
putative / long-chain acyl-CoA synthetase, putative
similar to acyl-CoA synthetase (MF7P) gi:1617270 from
Brassica napus
Length = 666
Score = 31.1 bits (67), Expect = 0.83
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 616 FRIPEGNPEDTILLLPTSGSTGLPKAVLLPNRGNSCSSTYVL 741
+ +P P D ++ TSG+TG PK V++ N +T V+
Sbjct: 215 YELPIKKPSDICTIMYTSGTTGDPKGVMISNESIVTITTGVM 256
>At5g27600.1 68418.m03305 AMP-binding protein, putative similar to
AMP-binding protein (MF39P) gi:1617274 from Brassica
napus, long-chain-fatty-acid--CoA ligase - Brassica
napus, EMBL:Z72152; contains Pfam AMP-binding enzyme
domain PF00501
Length = 700
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Frame = +1
Query: 475 VFCDREYYNDIKKSLDDLPDLKTEAYICNEDDLLEDFINGHSNDIDSFR--IPEGN---- 636
+FC + N + L ++P ++ + D+ L G I S++ + +G
Sbjct: 194 IFCVPQTLNILLSFLAEIPSIRLIVVVGGADEHLPSLPRGTGVTIVSYQKLLSQGRSSLH 253
Query: 637 ------PEDTILLLPTSGSTGLPKAVLLPNRGN 717
PED + TSG+TG PK V+L GN
Sbjct: 254 PFSPPKPEDIATICYTSGTTGTPKGVVL-THGN 285
>At1g49430.1 68414.m05541 long-chain-fatty-acid--CoA ligase /
long-chain acyl-CoA synthetase nearly identical to acyl
CoA synthetase (MF45P) GI:1617268 from [Brassica napus]
Length = 665
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 604 DIDSFRIPEGNPEDTILLLPTSGSTGLPKAVLLPN 708
++D +P D ++ TSG+TG PK V+L N
Sbjct: 211 NLDEANLPRKRKTDICTIMYTSGTTGEPKGVILNN 245
>At5g44316.1 68418.m05426 ATP-binding-cassette transporter, putative
similar to ATP-binding-cassette transporter (ABC1)
described in PMID:11156608
Length = 470
Score = 30.3 bits (65), Expect = 1.4
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 433 YELSY-FLQLLEPSIVFCDREYYNDIKKSLDDLPDLKTEAYICNEDDLLEDFINGHSNDI 609
Y L + FL+ L P+ F R ND + D K + Y N+D D G +I
Sbjct: 32 YSLKFLFLKTLNPTRFFKVRA--NDGTEPSD-----KLQQYFQNQD---YDKKYGFLENI 81
Query: 610 DSFRIPEGNPEDTILLL 660
DSF IP+G E+TI L+
Sbjct: 82 DSFTIPKGLSEETIRLI 98
>At5g36880.1 68418.m04418 acetyl-CoA synthetase, putative /
acetate-CoA ligase, putative similar to SP|P27550
(Escherichia coli) and gi:8439651 (Homo sapiens);
contains Pfam AMP-binding enzyme domain PF00501
Length = 693
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +1
Query: 640 EDTILLLPTSGSTGLPKAVL 699
ED + LL TSGSTG PK VL
Sbjct: 302 EDPLFLLYTSGSTGKPKGVL 321
>At3g48990.1 68416.m05351 AMP-dependent synthetase and ligase family
protein similar to peroxisomal-coenzyme A synthetase
(FAT2) [gi:586339] from Saccharomyces cerevisiae;
contains Pfam AMP-binding enzyme domain PF00501;
identical to cDNA; identical to cDNA adenosine
monophosphate binding protein 3 AMPBP3
(AMPBP3)GI:20799714
Length = 514
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/127 (18%), Positives = 53/127 (41%)
Frame = +1
Query: 322 GNNIMVVMRNHQNLFSIYWSLLLSGALPFMMDPSTTVYELSYFLQLLEPSIVFCDREYYN 501
G+ + + N ++ +++ + A ++ + T E ++L + ++ +E
Sbjct: 56 GDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTAEEFEFYLSDSDSKLLLTSKEGNA 115
Query: 502 DIKKSLDDLPDLKTEAYICNEDDLLEDFINGHSNDIDSFRIPEGNPEDTILLLPTSGSTG 681
+++ L A + + L + + +DS +P+D L L TSG+T
Sbjct: 116 PAQEAASKLKISHVTATLLDAGSDLVLSVADSDSVVDSATELVNHPDDGALFLHTSGTTS 175
Query: 682 LPKAVLL 702
PK V L
Sbjct: 176 RPKGVPL 182
>At2g36490.1 68415.m04479 HhH-GPD base excision DNA repair family
protein (ROS1) similar to DEMETER protein [Arabidopsis
thaliana] GI:21743571; contains Pfam profile PF00730:
HhH-GPD superfamily base excision DNA repair protein
Length = 1393
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = -1
Query: 220 WRLVVSLDNGKQFLLISIYPALLHLERHLWPLIFHLTLHLDTVEKRLASLLKQCVTFYK- 44
W + L Q L+ +YP L ++++LWP + L +K L L Q +TF K
Sbjct: 983 WVPLQPLPESLQLHLLEMYPMLESIQKYLWPRLCKLD------QKTLYELHYQMITFGKV 1036
Query: 43 -CLAIAASAFAC 11
C + AC
Sbjct: 1037 FCTKSKPNCNAC 1048
>At1g30520.1 68414.m03734 acyl-activating enzyme 14 (AAE14)
identical to acyl-activating enzyme 14 [Arabidopsis
thaliana]; similar to SP|Q42524 4-coumarate--CoA ligase
1 (EC 6.2.1.12) (4-coumaroyl-CoA synthase 1)
{Arabidopsis thaliana}; contains Pfam profile PF00501:
AMP-binding enzyme; identical to cDNA acyl-activating
enzyme 14 (At1g30520) GI:29893263
Length = 560
Score = 29.5 bits (63), Expect = 2.5
Identities = 33/160 (20%), Positives = 68/160 (42%), Gaps = 11/160 (6%)
Frame = +1
Query: 256 TNEQILKRAVSIARSIMARGAAGNNIMVVMRNHQNLFSIYWSLLLS--GALPFMMDPSTT 429
T + + +S+A ++ G +++ + + +LF + W L ++ G + ++ +
Sbjct: 34 TGREFVDGVLSLAAGLIRLGLRNGDVVSIAAFNSDLF-LEWLLAVALVGGVVAPLNYRWS 92
Query: 430 VYELSYFLQLLEPSIVFCDREYYN-DIKKSLDDLPDLK-------TEAYICNE-DDLLED 582
+ E + L+EP ++ D + I D+P LK T NE + L
Sbjct: 93 LKEAKMAMLLVEPVLLVTDETCVSWCIDVQNGDIPSLKWRVLMESTSTDFANELNQFLTT 152
Query: 583 FINGHSNDIDSFRIPEGNPEDTILLLPTSGSTGLPKAVLL 702
+ + S +D +++ TSG+TG PK V +
Sbjct: 153 EMLKQRTLVPSLATYAWASDDAVVICFTSGTTGRPKGVTI 192
>At1g04690.1 68414.m00466 potassium channel protein, putative nearly
identical to K+ channel protein [Arabidopsis thaliana]
GI:1063415; contains Pfam profile PF00248:
oxidoreductase, aldo/keto reductase family
Length = 328
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +1
Query: 85 ASQLYLDEVLNEILAAKGVVPDAKERDRLILAEIAFHCLKKRPNATNMINGSTGESFTNE 264
A++ +D+VL ++ G+ P A E + LA++A PN +++I G+T ES E
Sbjct: 239 ANRSLVDDVLRKV---SGLKPIADELG-VTLAQLAIAWCASNPNVSSVITGATRESQIQE 294
Query: 265 QI 270
+
Sbjct: 295 NM 296
>At4g04770.1 68417.m00699 ATP-binding-cassette transporter (ABC1)
Identical to the protein described in PMID:11156608 and
note that sequence was not deposited into GenBank by the
authors.
Length = 557
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1
Query: 592 GHSNDIDSFRIPEGNPEDTILLL 660
G DIDSF IP+G E+TI L+
Sbjct: 95 GFVEDIDSFTIPKGLSEETIRLI 117
>At3g29791.1 68416.m03788 expressed protein
Length = 125
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 203 FRQWKAISANINLSRSFASGTTPLAANIS 117
+ W AIS N L SF S TTP + I+
Sbjct: 3 YAAWNAISFNAGLGWSFRSNTTPSESTIT 31
>At5g60720.1 68418.m07619 expressed protein contains Pfam profile
PF04784: Protein of unknown function, DUF547
Length = 691
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +1
Query: 19 TRLPRLPNTYKMSHTVLRGKPNASQLYLDEVLNEILAAKGVVPDAKERDRLILAEIAFHC 198
T LP + + + H+V KPN Q +E+ E+ + ++ D +E+ R IL ++ H
Sbjct: 50 TTLPGSISPFNVPHSVRTKKPNGQQ-KKEEIEKEVWMLREML-DQEEKTREILEQVQKHQ 107
Query: 199 L 201
L
Sbjct: 108 L 108
>At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEMETER
protein [Arabidopsis thaliana] GI:21743571; contains Pfam
profile PF00730: HhH-GPD superfamily base excision DNA
repair protein
Length = 1729
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = -1
Query: 220 WRLVVSLDNGKQFLLISIYPALLHLERHLWPLIFHLTLHLDTVEKRLASLLKQCVTFYK- 44
W + L Q L+ +YP L +++ LWP + L ++ L L Q +TF K
Sbjct: 1316 WVPLQPLPESLQLHLLELYPVLESIQKFLWPRLCKLD------QRTLYELHYQLITFGKV 1369
Query: 43 -CLAIAASAFACQDR 2
C + AC R
Sbjct: 1370 FCTKSRPNCNACPMR 1384
>At3g01370.1 68416.m00059 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 1011
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/69 (27%), Positives = 29/69 (42%)
Frame = +1
Query: 40 NTYKMSHTVLRGKPNASQLYLDEVLNEILAAKGVVPDAKERDRLILAEIAFHCLKKRPNA 219
N++ ++ L G S + + G+V D R+RLIL + A K+ P A
Sbjct: 838 NSFLNANRKLPGSSTGSGSQISALRERKSENDGLVTDLSNRERLILRKQALKMKKRPPFA 897
Query: 220 TNMINGSTG 246
N TG
Sbjct: 898 VGRSNVVTG 906
>At5g45410.1 68418.m05580 expressed protein similar to unknown
protein (pir||T05524)
Length = 342
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 298 SIMARGAAGNNIMVVMRNHQNLFSIYWSLLLSGALPFM 411
+I G A N + V R H FS W L + A+PF+
Sbjct: 212 AIALMGMAANVPLGVWREHTKKFSPAWFLAVHAAVPFI 249
>At5g16370.1 68418.m01913 AMP-binding protein, putative similar to
AMP-binding protein GI:1903034 from [Brassica napus];
contains Pfam AMP-binding domain PF00501; identical to
cDNA adenosine monophosphate binding protein 5 AMPBP5
(AMPBP5) GI:20799718
Length = 552
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 595 HSNDIDSFRIPEGNPEDTILLLPTSGSTGLPKAVLLPNRG 714
H D+D I + D ++L TSG+T PK V+ +RG
Sbjct: 170 HRGDLDFKWIRPESEWDPVVLNYTSGTTSAPKGVVHCHRG 209
>At5g09420.1 68418.m01091 chloroplast outer membrane translocon
subunit, putative similar to component of chloroplast
outer membrane translocon Toc64 [Pisum sativum]
GI:7453538; contains Pfam profiles PF01425: Amidase,
PF00515: TPR Domain
Length = 603
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -3
Query: 740 KT*VDEQLFPLFGKSTALGSPVDPLVGSNNIVSSGFPSG 624
KT +DE F + G++ G+P++PL+ N V G SG
Sbjct: 123 KTIMDELGFGIIGENKHYGTPINPLMPDN--VPGGCSSG 159
>At4g02190.1 68417.m00291 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 659
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = -2
Query: 375 IDRK*ILMVSHHHHNVVPCGPSGHYRTCNRYSAFQNLLICET 250
+D + +L+ H H+++PC C R+ A + C+T
Sbjct: 1 MDSEGVLLRLIHEHSMIPCNHLRKGDCCGRFEAISDGYYCKT 42
>At3g59760.3 68416.m06669 cysteine synthase, mitochondrial, putative
/ O-acetylserine (thiol)-lyase, putative /
O-acetylserine sulfhydrylase, putative similar to
SP|Q43725 Cysteine synthase, mitochondrial precursor (EC
4.2.99.8) (O- acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) {Arabidopsis thaliana}
Length = 430
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 634 NPEDTILLLPTSGSTGLPKAVLLPNRGNSCSSTYVLDVSHE 756
+P ++L+ PTSG+TG+ A + +RG T +S E
Sbjct: 172 SPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSME 212
>At3g59760.2 68416.m06668 cysteine synthase, mitochondrial, putative
/ O-acetylserine (thiol)-lyase, putative /
O-acetylserine sulfhydrylase, putative similar to
SP|Q43725 Cysteine synthase, mitochondrial precursor (EC
4.2.99.8) (O- acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) {Arabidopsis thaliana}
Length = 432
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 634 NPEDTILLLPTSGSTGLPKAVLLPNRGNSCSSTYVLDVSHE 756
+P ++L+ PTSG+TG+ A + +RG T +S E
Sbjct: 172 SPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSME 212
>At3g59760.1 68416.m06667 cysteine synthase, mitochondrial, putative
/ O-acetylserine (thiol)-lyase, putative /
O-acetylserine sulfhydrylase, putative similar to
SP|Q43725 Cysteine synthase, mitochondrial precursor (EC
4.2.99.8) (O- acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) {Arabidopsis thaliana}
Length = 433
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 634 NPEDTILLLPTSGSTGLPKAVLLPNRGNSCSSTYVLDVSHE 756
+P ++L+ PTSG+TG+ A + +RG T +S E
Sbjct: 172 SPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSME 212
>At3g46590.1 68416.m05057 telomere repeat-binding protein, putative
similar to telomere repeat-binding protein TRP1
[Arabidopsis thaliana] gi|5459298|emb|CAB50690
Length = 552
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 505 IKKSLDDLPDLKTEAYICNEDDLLEDFINGHSNDIDSFRIPEGNPEDTILLLPTS 669
++ SL+ P +Y+ D +D H N +DS PE +P D+ L TS
Sbjct: 362 LEPSLETTPQPLLSSYL--SDHACDDVTLCHDNALDSSHEPEPSPADSFGKLGTS 414
>At1g09840.3 68414.m01108 shaggy-related protein kinase kappa /
ASK-kappa (ASK10) identical to shaggy-related protein
kinase kappa SP:Q39019 GI:717180 from [Arabidopsis
thaliana]
Length = 421
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +2
Query: 599 VTTSTVLGF-PKGIQRI--QYYYYPQVDPLDYLKLYSYRIGGIVAHLPTSW 742
V + VL F P+ + R+ Y Q+ PL Y+KLY+Y+I +A++ S+
Sbjct: 152 VYLNLVLEFVPETVNRVARSYSRTNQLMPLIYVKLYTYQICRALAYIHNSF 202
>At1g09840.2 68414.m01107 shaggy-related protein kinase kappa /
ASK-kappa (ASK10) identical to shaggy-related protein
kinase kappa SP:Q39019 GI:717180 from [Arabidopsis
thaliana]
Length = 421
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +2
Query: 599 VTTSTVLGF-PKGIQRI--QYYYYPQVDPLDYLKLYSYRIGGIVAHLPTSW 742
V + VL F P+ + R+ Y Q+ PL Y+KLY+Y+I +A++ S+
Sbjct: 152 VYLNLVLEFVPETVNRVARSYSRTNQLMPLIYVKLYTYQICRALAYIHNSF 202
>At1g09840.1 68414.m01106 shaggy-related protein kinase kappa /
ASK-kappa (ASK10) identical to shaggy-related protein
kinase kappa SP:Q39019 GI:717180 from [Arabidopsis
thaliana]
Length = 421
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +2
Query: 599 VTTSTVLGF-PKGIQRI--QYYYYPQVDPLDYLKLYSYRIGGIVAHLPTSW 742
V + VL F P+ + R+ Y Q+ PL Y+KLY+Y+I +A++ S+
Sbjct: 152 VYLNLVLEFVPETVNRVARSYSRTNQLMPLIYVKLYTYQICRALAYIHNSF 202
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,817,106
Number of Sequences: 28952
Number of extensions: 360625
Number of successful extensions: 1153
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1682736544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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