Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30428
(708 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC150273-1|AAI50274.1| 1422|Homo sapiens YEATS domain containing... 33 0.76
BC082270-1|AAH82270.1| 588|Homo sapiens YEATS2 protein protein. 33 0.76
AB033023-1|BAA86511.1| 1487|Homo sapiens KIAA1197 protein protein. 33 0.76
BC132862-1|AAI32863.1| 1316|Homo sapiens ubiquitin specific pept... 33 1.3
BC060846-1|AAH60846.2| 1202|Homo sapiens USP42 protein protein. 33 1.3
AY618868-1|AAT67238.1| 1324|Homo sapiens ubiquitin specific prot... 33 1.3
AK022759-1|BAB14232.1| 1198|Homo sapiens protein ( Homo sapiens ... 33 1.3
AJ601395-1|CAE53097.1| 1325|Homo sapiens ubiquitin-specific prot... 33 1.3
AL136164-1|CAI20223.1| 451|Homo sapiens protein ( Human DNA seq... 32 1.7
AK024732-1|BAB14980.1| 252|Homo sapiens protein ( Homo sapiens ... 32 1.7
BC117310-1|AAI17311.1| 1142|Homo sapiens enamelin protein. 31 3.1
BC117308-1|AAI17309.1| 1142|Homo sapiens enamelin protein. 31 3.1
AY167999-1|AAN87336.1| 1142|Homo sapiens enamelin protein. 31 3.1
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 3.1
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 3.1
AF125373-1|AAG43242.1| 1142|Homo sapiens enamelin protein. 31 4.0
DQ120714-1|ABC40673.1| 247|Homo sapiens rcTPM3 protein. 31 5.3
D28114-1|BAA05660.1| 183|Homo sapiens MOBP protein. 30 7.1
D28113-1|BAA05659.1| 182|Homo sapiens MOBP protein. 30 7.1
BC126396-1|AAI26397.1| 574|Homo sapiens forkhead box J2 protein. 30 9.3
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 30 9.3
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 30 9.3
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 30 9.3
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 30 9.3
AK131543-1|BAD18678.1| 205|Homo sapiens protein ( Homo sapiens ... 30 9.3
AF155133-1|AAK49016.1| 526|Homo sapiens FOXJ2 forkhead factor i... 30 9.3
AF155132-1|AAF65927.1| 574|Homo sapiens FOXJ2 forkhead factor p... 30 9.3
>BC150273-1|AAI50274.1| 1422|Homo sapiens YEATS domain containing 2
protein.
Length = 1422
Score = 33.5 bits (73), Expect = 0.76
Identities = 19/67 (28%), Positives = 28/67 (41%)
Frame = +3
Query: 6 PHVHGCTPVRRRGHQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDVVPCVNSVSESQD 185
P H TP++ + H R G P P + + S LTQ D C +S S + +
Sbjct: 1213 PRFHHLTPLKTKHIAHWCRCHGYTPPDPESLRNDGDSIEDVLTQIDSEPECPSSFSSADN 1272
Query: 186 VTRTNSD 206
+ R D
Sbjct: 1273 LCRKLED 1279
>BC082270-1|AAH82270.1| 588|Homo sapiens YEATS2 protein protein.
Length = 588
Score = 33.5 bits (73), Expect = 0.76
Identities = 19/67 (28%), Positives = 28/67 (41%)
Frame = +3
Query: 6 PHVHGCTPVRRRGHQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDVVPCVNSVSESQD 185
P H TP++ + H R G P P + + S LTQ D C +S S + +
Sbjct: 379 PRFHHLTPLKTKHIAHWCRCHGYTPPDPESLRNDGDSIEDVLTQIDSEPECPSSFSSADN 438
Query: 186 VTRTNSD 206
+ R D
Sbjct: 439 LCRKLED 445
>AB033023-1|BAA86511.1| 1487|Homo sapiens KIAA1197 protein protein.
Length = 1487
Score = 33.5 bits (73), Expect = 0.76
Identities = 19/67 (28%), Positives = 28/67 (41%)
Frame = +3
Query: 6 PHVHGCTPVRRRGHQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDVVPCVNSVSESQD 185
P H TP++ + H R G P P + + S LTQ D C +S S + +
Sbjct: 1278 PRFHHLTPLKTKHIAHWCRCHGYTPPDPESLRNDGDSIEDVLTQIDSEPECPSSFSSADN 1337
Query: 186 VTRTNSD 206
+ R D
Sbjct: 1338 LCRKLED 1344
>BC132862-1|AAI32863.1| 1316|Homo sapiens ubiquitin specific peptidase
42 protein.
Length = 1316
Score = 32.7 bits (71), Expect = 1.3
Identities = 23/91 (25%), Positives = 34/91 (37%)
Frame = +3
Query: 18 GCTPVRRRGHQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDVVPCVNSVSESQDVTRT 197
GC P R R R A A +PD RT L D+ +R
Sbjct: 1102 GCEPARERERHRPSSPRAGAPHALAPHPDRFSHDRTALVAGDNCNLSDRFHEHENGKSRK 1161
Query: 198 NSDDALSNSNLTVAEDCANDEQENELDRVKS 290
D++ NS+ V + EQ++ L+ K+
Sbjct: 1162 RRHDSVENSDSHVEKKARRSEQKDPLEEPKA 1192
>BC060846-1|AAH60846.2| 1202|Homo sapiens USP42 protein protein.
Length = 1202
Score = 32.7 bits (71), Expect = 1.3
Identities = 23/91 (25%), Positives = 34/91 (37%)
Frame = +3
Query: 18 GCTPVRRRGHQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDVVPCVNSVSESQDVTRT 197
GC P R R R A A +PD RT L D+ +R
Sbjct: 1102 GCEPARERERHRPSSPRAGAPHALAPHPDRFSHDRTALVAGDNCNLSDRFHEHENGKSRK 1161
Query: 198 NSDDALSNSNLTVAEDCANDEQENELDRVKS 290
D++ NS+ V + EQ++ L+ K+
Sbjct: 1162 RRHDSVENSDSHVEKKARRSEQKDPLEEPKA 1192
>AY618868-1|AAT67238.1| 1324|Homo sapiens ubiquitin specific protease
42 protein.
Length = 1324
Score = 32.7 bits (71), Expect = 1.3
Identities = 23/91 (25%), Positives = 34/91 (37%)
Frame = +3
Query: 18 GCTPVRRRGHQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDVVPCVNSVSESQDVTRT 197
GC P R R R A A +PD RT L D+ +R
Sbjct: 1102 GCEPARERERHRPSSPRAGAPHALAPHPDRFSHDRTALVAGDNCNLSDRFHEHENGKSRK 1161
Query: 198 NSDDALSNSNLTVAEDCANDEQENELDRVKS 290
D++ NS+ V + EQ++ L+ K+
Sbjct: 1162 RRHDSVENSDSHVEKKARRSEQKDPLEEPKA 1192
>AK022759-1|BAB14232.1| 1198|Homo sapiens protein ( Homo sapiens cDNA
FLJ12697 fis, clone NT2RP1000522, weakly similar to
UBIQUITIN CARBOXYL-TERMINAL HYDROLASE DUB-1 (EC
3.1.2.15). ).
Length = 1198
Score = 32.7 bits (71), Expect = 1.3
Identities = 23/91 (25%), Positives = 34/91 (37%)
Frame = +3
Query: 18 GCTPVRRRGHQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDVVPCVNSVSESQDVTRT 197
GC P R R R A A +PD RT L D+ +R
Sbjct: 1102 GCEPARERERHRPSSPRAGAPHALAPHPDRFSHDRTALVAGDNCNLSDRFHEHENGKSRK 1161
Query: 198 NSDDALSNSNLTVAEDCANDEQENELDRVKS 290
D++ NS+ V + EQ++ L+ K+
Sbjct: 1162 RRHDSVENSDSHVEKKARRSEQKDPLEEPKA 1192
>AJ601395-1|CAE53097.1| 1325|Homo sapiens ubiquitin-specific protease
42 protein.
Length = 1325
Score = 32.7 bits (71), Expect = 1.3
Identities = 23/91 (25%), Positives = 34/91 (37%)
Frame = +3
Query: 18 GCTPVRRRGHQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDVVPCVNSVSESQDVTRT 197
GC P R R R A A +PD RT L D+ +R
Sbjct: 1102 GCEPARERERHRPSSPRAGAPHALAPHPDRFSHDRTALVAGDNCNLSDRFHEHENGKSRK 1161
Query: 198 NSDDALSNSNLTVAEDCANDEQENELDRVKS 290
D++ NS+ V + EQ++ L+ K+
Sbjct: 1162 RRHDSVENSDSHVEKKARRSEQKDPLEEPKA 1192
>AL136164-1|CAI20223.1| 451|Homo sapiens protein ( Human DNA
sequence from clone RP3-331H24 on chromosome 6 Contains
the 5' end of a novel gene, the gene for a novel protein
similar to ).
Length = 451
Score = 32.3 bits (70), Expect = 1.7
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +3
Query: 75 RQPAPATN-PDPEPS---ARTTLTQTDDVVPCVNSVSESQDVTRTNSDDALSNSNLTVAE 242
++P T+ P PEPS A+ T+ D +NS E T T +++S N E
Sbjct: 371 KEPVEETDRPSPEPSNEAAKPRNTEKDSNAENMNSQPEKTVTTPTEKKESVSPEN---NE 427
Query: 243 DCANDEQENE 272
+ ND Q+NE
Sbjct: 428 EGGNDNQDNE 437
>AK024732-1|BAB14980.1| 252|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21079 fis, clone CAS02253. ).
Length = 252
Score = 32.3 bits (70), Expect = 1.7
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +3
Query: 75 RQPAPATN-PDPEPS---ARTTLTQTDDVVPCVNSVSESQDVTRTNSDDALSNSNLTVAE 242
++P T+ P PEPS A+ T+ D +NS E T T +++S N E
Sbjct: 172 KEPVEETDRPSPEPSNEAAKPRNTEKDSNAENMNSQPEKTVTTPTEKKESVSPEN---NE 228
Query: 243 DCANDEQENE 272
+ ND Q+NE
Sbjct: 229 EGGNDNQDNE 238
>BC117310-1|AAI17311.1| 1142|Homo sapiens enamelin protein.
Length = 1142
Score = 31.5 bits (68), Expect = 3.1
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 72 DRQPAPATNPDPEPSARTTLTQTDDVVPCVNSVSESQDVTRT-NSDDALSNSNLTVAED 245
+ P A +P EP+A +T+T+T+ P D + T NS L+ N A++
Sbjct: 229 EEDPPKAESPGTEPTANSTVTETNSTQPNPKGSQGGNDTSPTGNSTPGLNTGNNPPAQN 287
>BC117308-1|AAI17309.1| 1142|Homo sapiens enamelin protein.
Length = 1142
Score = 31.5 bits (68), Expect = 3.1
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 72 DRQPAPATNPDPEPSARTTLTQTDDVVPCVNSVSESQDVTRT-NSDDALSNSNLTVAED 245
+ P A +P EP+A +T+T+T+ P D + T NS L+ N A++
Sbjct: 229 EEDPPKAESPGTEPTANSTVTETNSTQPNPKGSQGGNDTSPTGNSTPGLNTGNNPPAQN 287
>AY167999-1|AAN87336.1| 1142|Homo sapiens enamelin protein.
Length = 1142
Score = 31.5 bits (68), Expect = 3.1
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 72 DRQPAPATNPDPEPSARTTLTQTDDVVPCVNSVSESQDVTRT-NSDDALSNSNLTVAED 245
+ P A +P EP+A +T+T+T+ P D + T NS L+ N A++
Sbjct: 229 EEDPPKAESPGTEPTANSTVTETNSTQPNPKGSQGGNDTSPTGNSTPGLNTGNNPPAQN 287
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.5 bits (68), Expect = 3.1
Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Frame = +3
Query: 24 TPVRRRGHQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDV---VPCVNSVSESQDVTR 194
+PVRR + H R R + + +P PE +T V P V + + D+ +
Sbjct: 187 SPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATSTSDILK 246
Query: 195 TNSDDALSNSNLTVAEDCANDEQENELDRVKS 290
+ + E + EQE E R +S
Sbjct: 247 VPKPEPIPEPKEPSPEKNSKKEQEKEKTRPRS 278
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.5 bits (68), Expect = 3.1
Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Frame = +3
Query: 24 TPVRRRGHQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDV---VPCVNSVSESQDVTR 194
+PVRR + H R R + + +P PE +T V P V + + D+ +
Sbjct: 187 SPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATSTSDILK 246
Query: 195 TNSDDALSNSNLTVAEDCANDEQENELDRVKS 290
+ + E + EQE E R +S
Sbjct: 247 VPKPEPIPEPKEPSPEKNSKKEQEKEKTRPRS 278
>AF125373-1|AAG43242.1| 1142|Homo sapiens enamelin protein.
Length = 1142
Score = 31.1 bits (67), Expect = 4.0
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 72 DRQPAPATNPDPEPSARTTLTQTDDVVPCVNSVSESQDVTRT-NSDDALSNSN 227
+ P A +P EP+A +T+T+T+ P D + T NS L+ N
Sbjct: 229 EEDPPKAESPGTEPTANSTVTETNSTQPNPKGSQGGNDTSPTGNSTPGLNTGN 281
>DQ120714-1|ABC40673.1| 247|Homo sapiens rcTPM3 protein.
Length = 247
Score = 30.7 bits (66), Expect = 5.3
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +3
Query: 594 ALKRAESEVAALNRRIQLL 650
A K+AE+EVA+LNRRIQL+
Sbjct: 40 ARKQAEAEVASLNRRIQLV 58
>D28114-1|BAA05660.1| 183|Homo sapiens MOBP protein.
Length = 183
Score = 30.3 bits (65), Expect = 7.1
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 2 RTP-RPRLHPRAAQGAPTPPAFKGRPSTRPRHESRPRA 112
R P +PR PR+ + +PP + +P + PR E +PR+
Sbjct: 92 RAPAKPRSPPRSERQPRSPPRSERQPRSPPRSERQPRS 129
>D28113-1|BAA05659.1| 182|Homo sapiens MOBP protein.
Length = 182
Score = 30.3 bits (65), Expect = 7.1
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 2 RTP-RPRLHPRAAQGAPTPPAFKGRPSTRPRHESRPRA 112
R P +PR PR+ + +PP + +P + PR E +PR+
Sbjct: 92 RAPAKPRSPPRSERQPRSPPRSERQPRSPPRSERQPRS 129
>BC126396-1|AAI26397.1| 574|Homo sapiens forkhead box J2 protein.
Length = 574
Score = 29.9 bits (64), Expect = 9.3
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 6/81 (7%)
Frame = +3
Query: 45 HQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDVVP---C--VNSVSES-QDVTRTNSD 206
HQHHP +QP P P P+ + + T P C ++S+ ES + V R N
Sbjct: 378 HQHHPHSHPAQQPPP---PQPQAQGQAPINNTGFAFPSDWCSNIDSLKESFKMVNRLNWS 434
Query: 207 DALSNSNLTVAEDCANDEQEN 269
+ + E EQ+N
Sbjct: 435 SIEQSQFSELMESLRQAEQKN 455
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 29.9 bits (64), Expect = 9.3
Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Frame = +3
Query: 24 TPVRRRGHQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDV---VPCVNSVSESQDVTR 194
+PVRR + H R R + + +P PE +T V P V + + D+ +
Sbjct: 187 SPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATSTSDILK 246
Query: 195 TNSDDALSNSNLTVAEDCANDEQENELDRVKS 290
+ + E + E+E E R +S
Sbjct: 247 VPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRS 278
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 29.9 bits (64), Expect = 9.3
Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Frame = +3
Query: 24 TPVRRRGHQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDV---VPCVNSVSESQDVTR 194
+PVRR + H R R + + +P PE +T V P V + + D+ +
Sbjct: 187 SPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATSTSDILK 246
Query: 195 TNSDDALSNSNLTVAEDCANDEQENELDRVKS 290
+ + E + E+E E R +S
Sbjct: 247 VPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRS 278
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 29.9 bits (64), Expect = 9.3
Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Frame = +3
Query: 24 TPVRRRGHQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDV---VPCVNSVSESQDVTR 194
+PVRR + H R R + + +P PE +T V P V + + D+ +
Sbjct: 187 SPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATSTSDILK 246
Query: 195 TNSDDALSNSNLTVAEDCANDEQENELDRVKS 290
+ + E + E+E E R +S
Sbjct: 247 VPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRS 278
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 29.9 bits (64), Expect = 9.3
Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Frame = +3
Query: 24 TPVRRRGHQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDV---VPCVNSVSESQDVTR 194
+PVRR + H R R + + +P PE +T V P V + + D+ +
Sbjct: 187 SPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATSTSDILK 246
Query: 195 TNSDDALSNSNLTVAEDCANDEQENELDRVKS 290
+ + E + E+E E R +S
Sbjct: 247 VPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRS 278
>AK131543-1|BAD18678.1| 205|Homo sapiens protein ( Homo sapiens
cDNA FLJ16779 fis, clone BRHIP3038037. ).
Length = 205
Score = 29.9 bits (64), Expect = 9.3
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 8 PRPRL--HPRAAQGAPTPPAFKGRPSTRPRHESRPRAVCANDLNSNRR 145
PRPR PRAA P PP S +P + +PR A L S+ R
Sbjct: 133 PRPRSARSPRAAASTPPPPHPVPPSSPQPPAQPQPRVTAALRLPSHPR 180
>AF155133-1|AAK49016.1| 526|Homo sapiens FOXJ2 forkhead factor
isoform FOXJ2.S protein.
Length = 526
Score = 29.9 bits (64), Expect = 9.3
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 6/81 (7%)
Frame = +3
Query: 45 HQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDVVP---C--VNSVSES-QDVTRTNSD 206
HQHHP +QP P P P+ + + T P C ++S+ ES + V R N
Sbjct: 378 HQHHPHSHPAQQPPP---PQPQAQGQAPINNTGFAFPSDWCSNIDSLKESFKMVNRLNWS 434
Query: 207 DALSNSNLTVAEDCANDEQEN 269
+ + E EQ+N
Sbjct: 435 SIEQSQFSELMESLRQAEQKN 455
>AF155132-1|AAF65927.1| 574|Homo sapiens FOXJ2 forkhead factor
protein.
Length = 574
Score = 29.9 bits (64), Expect = 9.3
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 6/81 (7%)
Frame = +3
Query: 45 HQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDVVP---C--VNSVSES-QDVTRTNSD 206
HQHHP +QP P P P+ + + T P C ++S+ ES + V R N
Sbjct: 378 HQHHPHSHPAQQPPP---PQPQAQGQAPINNTGFAFPSDWCSNIDSLKESFKMVNRLNWS 434
Query: 207 DALSNSNLTVAEDCANDEQEN 269
+ + E EQ+N
Sbjct: 435 SIEQSQFSELMESLRQAEQKN 455
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,714,874
Number of Sequences: 237096
Number of extensions: 1956272
Number of successful extensions: 9673
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 8176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9619
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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