Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30427
(775 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 151 1e-35
UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Anther... 74 3e-12
UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Re... 66 1e-09
UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase fr... 61 3e-08
UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-direct... 55 2e-06
UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile... 51 4e-05
UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-direct... 49 1e-04
UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein; ... 47 5e-04
UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase fr... 45 0.002
UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:... 39 0.12
UniRef50_UPI0000E4756E Cluster: PREDICTED: similar to endonuclea... 34 4.5
UniRef50_UPI0000587F4D Cluster: PREDICTED: similar to endonuclea... 34 4.5
UniRef50_Q2JJK4 Cluster: Transcriptional regulator, Crp/Fnr fami... 34 4.5
UniRef50_A6RZH2 Cluster: Predicted protein; n=2; Sclerotiniaceae... 34 4.5
UniRef50_Q4RWI8 Cluster: Chromosome 3 SCAF14987, whole genome sh... 33 6.0
UniRef50_Q49AN0 Cluster: Cryptochrome-2; n=106; Eumetazoa|Rep: C... 33 6.0
UniRef50_UPI0000E48EFD Cluster: PREDICTED: similar to reverse tr... 33 7.9
UniRef50_Q191B5 Cluster: UDP-glucose/GDP-mannose dehydrogenase p... 33 7.9
>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-like
protein; n=9; cellular organisms|Rep: Endonuclease and
reverse transcriptase-like protein - Bombyx mori (Silk
moth)
Length = 960
Score = 151 bits (367), Expect = 1e-35
Identities = 88/148 (59%), Positives = 94/148 (63%), Gaps = 23/148 (15%)
Frame = -1
Query: 703 RNSHTPLNLFGQSKPLAW*VK*LGVVLDKSIKFRPHIK---------------------- 590
RN P+ LFG P A VK LGV LD S+ FRPHIK
Sbjct: 745 RNITPPITLFGLPIPWARKVKYLGVTLDASMTFRPHIKTVRDRAAFILGRLYPMICKRSK 804
Query: 589 -SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWFVRNVDLH 413
SLRNK T YKT + P+MTYASVV AH A HID LQ LQS F RLAVGAPWFVRNVDLH
Sbjct: 805 MSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLH 864
Query: 412 DDLVLESITKHLKSASERYFDKATHYDN 329
DDL LESI KH+KS SERYFDKA +DN
Sbjct: 865 DDLGLESIRKHMKSVSERYFDKAMRHDN 892
Score = 52.8 bits (121), Expect = 9e-06
Identities = 24/39 (61%), Positives = 29/39 (74%)
Frame = -2
Query: 333 IIIAAADYSLTLFHTGASYRRCPRHVFIDPSDLLTMLLD 217
+I+AAADYS H GAS+RR PRHV DPSD +T+ LD
Sbjct: 894 LIVAAADYSPNPDHAGASHRRRPRHVLTDPSDPITLALD 932
>UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Antheraea
mylitta|Rep: Reverse transcriptase-like - Antheraea
mylitta (Tasar silkworm)
Length = 186
Score = 74.1 bits (174), Expect = 3e-12
Identities = 35/85 (41%), Positives = 54/85 (63%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWFVRNVDLHD 410
SLR+K YKT + P++TY+ V AH++ + LQV Q+ R G PW++R VDLH
Sbjct: 17 SLRHKLILYKTCIRPVITYSCPVFAHMSKDNFHKLQVFQNRVLRKVTGTPWYIRRVDLHR 76
Query: 409 DLVLESITKHLKSASERYFDKATHY 335
+L + SI ++KS + YF+KA ++
Sbjct: 77 NLEIPSIWTYVKSLTISYFEKAANH 101
Score = 33.1 bits (72), Expect = 7.9
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = -2
Query: 333 IIIAAADYSLTLFHTGASYRRCPRHVFIDPSDLLTMLLD 217
++++AA+Y A RR PRH+FIDP D +T + D
Sbjct: 105 LVVSAANYQPV--PNAARPRRRPRHIFIDPPDEITAVND 141
>UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Rep:
GH03753p - Drosophila melanogaster (Fruit fly)
Length = 888
Score = 65.7 bits (153), Expect = 1e-09
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWFVRNVDLHD 410
SL K Y + L PI TY S + + + +IDI+Q QS R+ GAPW++RN ++H
Sbjct: 778 SLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHR 837
Query: 409 DLVLESITKHLKSASERYFDKATHYDNHCRR*LL---LDSVSHRSQLPS 272
DL ++ + + + +Y +K T + N R L+ S HR+ LP+
Sbjct: 838 DLKIKLVIEVIAEKKTKYNEKLTTHTNPLARKLIRVCSQSRLHRNDLPA 886
>UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase from
transposon X-element; n=1; Drosophila melanogaster|Rep:
Probable RNA-directed DNA polymerase from transposon
X-element - Drosophila melanogaster (Fruit fly)
Length = 908
Score = 60.9 bits (141), Expect = 3e-08
Identities = 32/87 (36%), Positives = 41/87 (47%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWFVRNVDLHD 410
SL NK T YK L P Y + HI +Q +Q+ RL G WFVRN LH
Sbjct: 787 SLSNKLTIYKQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCEWFVRNTTLHR 846
Query: 409 DLVLESITKHLKSASERYFDKATHYDN 329
DL L ++ + S RY D+ + N
Sbjct: 847 DLKLATVFDEINKHSSRYHDRLERHRN 873
>UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=7; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 1336
Score = 55.2 bits (127), Expect = 2e-06
Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 25/133 (18%)
Frame = -1
Query: 685 LNLFGQSKPLAW*VK*LGVVLDKSIKFRPHIK-----------------------SLRNK 575
+ +F P + VK LGV+LDK + F PH+ S+ NK
Sbjct: 1204 VRMFNADIPWSDQVKYLGVILDKKLSFGPHLDYALAKGKMATGMLRSLVCRRSALSIDNK 1263
Query: 574 TTCYKTRL*PIMTYASVVSAHV-ASIHIDILQVLQSCFRRLAVGAPWFVRNVDLHDDLVL 398
YK+ + P MTYASV A + LQ Q+ F R A APWFVRN LH ++ +
Sbjct: 1264 LLLYKSVIRPTMTYASVAWAFAPCKTRMHKLQTFQNKFLRQAFNAPWFVRNNQLHREVKM 1323
Query: 397 ESITKHLK-SASE 362
++ + + +ASE
Sbjct: 1324 PTMEEFFRETASE 1336
>UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile
element jockey; n=4; Drosophiliti|Rep: RNA-directed DNA
polymerase from mobile element jockey - Drosophila
melanogaster (Fruit fly)
Length = 916
Score = 50.8 bits (116), Expect = 4e-05
Identities = 26/91 (28%), Positives = 47/91 (51%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWFVRNVDLHD 410
SL K YK+ L P + Y V A H++ +++LQ+ R GAPW++R D+
Sbjct: 792 SLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIER 851
Query: 409 DLVLESITKHLKSASERYFDKATHYDNHCRR 317
DL + + L++ +++Y ++ + N R
Sbjct: 852 DLKVPKLGDKLQNIAQKYMERLNVHPNSLAR 882
>UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 494
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/87 (28%), Positives = 46/87 (52%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWFVRNVDLHD 410
+L NK Y + L PI++YAS AS ++ + +Q+ R APWF+RN +L
Sbjct: 382 NLANKRLLYLSTLRPILSYASPCWGSAASSNLSHILTVQNKIIRQISNAPWFIRNKNLEK 441
Query: 409 DLVLESITKHLKSASERYFDKATHYDN 329
DL + ++ +K ++ + ++ +N
Sbjct: 442 DLKIPNLKDFIKKLNQDFANRTGTSNN 468
>UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein; n=80;
Culicimorpha|Rep: Reverse transcriptase homolog protein -
Chironomus thummi
Length = 883
Score = 47.2 bits (107), Expect = 5e-04
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = -1
Query: 586 LRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWFVRNVDLHDD 407
+RNK YK + PI TY +A H+ LQVLQ+ F R+ + + R DLH +
Sbjct: 796 VRNKLLIYKLAIRPIFTYGCSAFGSMAKTHLQKLQVLQNKFLRIVLNKTRYERITDLHTE 855
Query: 406 LVLESIT-KHLKSASE 362
+ SI K ASE
Sbjct: 856 AKIPSIEGSRRKVASE 871
>UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase from
transposon BS; n=7; melanogaster subgroup|Rep: Probable
RNA-directed DNA polymerase from transposon BS -
Drosophila melanogaster (Fruit fly)
Length = 906
Score = 45.2 bits (102), Expect = 0.002
Identities = 28/99 (28%), Positives = 45/99 (45%)
Frame = -1
Query: 604 RPHIKSLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWFVRN 425
R +LR K Y + PI Y + A + + +QVLQ+ R P++VR
Sbjct: 788 RKSTMTLRAKRAVYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYYVRG 847
Query: 424 VDLHDDLVLESITKHLKSASERYFDKATHYDNHCRR*LL 308
LH DL L ++ + + + RY D+ + + R LL
Sbjct: 848 TTLHRDLNLHTVEEQISRHTSRYSDRLRRHHSILARRLL 886
>UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:
ORF1 - Drosophila melanogaster (Fruit fly)
Length = 884
Score = 39.1 bits (87), Expect = 0.12
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWFVRNVDLH 413
S+ NK +KT PI+ Y S V A HI LQ+ Q+ +L + P++ LH
Sbjct: 812 SISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLH 870
>UniRef50_UPI0000E4756E Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 293
Score = 33.9 bits (74), Expect = 4.5
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = -1
Query: 586 LRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAV 449
LR K CYKT + P++ YA+VV +I L+ +Q + R A+
Sbjct: 215 LRTKVLCYKTLVLPVLEYAAVVWDPFTQKNITRLEKIQRRYARFAL 260
>UniRef50_UPI0000587F4D Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 405
Score = 33.9 bits (74), Expect = 4.5
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Frame = -1
Query: 643 K*LGVVLDKSIKFRPHIKSLRNK--------TTCYKTRL*PIMTYASVVSAHVASIHIDI 488
K LGV L K+ + HI ++ K CY T L PIM YAS++ +I
Sbjct: 223 KDLGVELQKNFSWNQHINTVTTKGQLHPKVKVLCYNTLLQPIMEYASIIWDPHTQANIKK 282
Query: 487 LQVLQSCFRR 458
L+++Q + R
Sbjct: 283 LEMVQRRYVR 292
>UniRef50_Q2JJK4 Cluster: Transcriptional regulator, Crp/Fnr family;
n=2; Synechococcus|Rep: Transcriptional regulator,
Crp/Fnr family - Synechococcus sp. (strain
JA-2-3B'a(2-13)) (Cyanobacteria bacteriumYellowstone
B-Prime)
Length = 212
Score = 33.9 bits (74), Expect = 4.5
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = -2
Query: 165 EFLSGPRLRSVIRRIRETSALELLGLSRKHSDNY*QILPLLA 40
E LS L+ V+RR+R+T AL L R+ D Q+L LLA
Sbjct: 109 EILSQGLLKQVVRRLRQTEALLALAGRRRVEDRLRQLLSLLA 150
>UniRef50_A6RZH2 Cluster: Predicted protein; n=2;
Sclerotiniaceae|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 420
Score = 33.9 bits (74), Expect = 4.5
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 77 CFRERPNSSRADVSRIRLMTDRSRGPLRNS 166
C R PN+S AD S MT++S G LR S
Sbjct: 195 CLRSLPNASNADTSNSNSMTNKSSGELRTS 224
>UniRef50_Q4RWI8 Cluster: Chromosome 3 SCAF14987, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 3 SCAF14987, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 357
Score = 33.5 bits (73), Expect = 6.0
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -2
Query: 684 STFSANPNPWPGKSSSWESSWINPLNSAHT*SPFGTRRRVTKLAYNL**HTQV-WCPLTW 508
S+ S P+P ++SSW W N N++ + F T R+ K + + HT++ W W
Sbjct: 206 SSVSPPPSPSQAETSSWRREW-NTENTSFLITDFSTSTRLIKTKWRITGHTRLCWYRSNW 264
>UniRef50_Q49AN0 Cluster: Cryptochrome-2; n=106; Eumetazoa|Rep:
Cryptochrome-2 - Homo sapiens (Human)
Length = 593
Score = 33.5 bits (73), Expect = 6.0
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -1
Query: 742 FYFRLWIYQY*INRNSHTPLNLFGQ 668
FY+RLW + RNS PL+LFGQ
Sbjct: 284 FYYRLWDLYKKVKRNSTPPLSLFGQ 308
>UniRef50_UPI0000E48EFD Cluster: PREDICTED: similar to reverse
transcriptase-like protein, partial; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
reverse transcriptase-like protein, partial -
Strongylocentrotus purpuratus
Length = 664
Score = 33.1 bits (72), Expect = 7.9
Identities = 26/87 (29%), Positives = 40/87 (45%)
Frame = -1
Query: 700 NSHTPLNLFGQSKPLAW*VK*LGVVLDKSIKFRPHIKSLRNKTTCYKTRL*PIMTYASVV 521
N P FG+ KP A V+ LGVV+DK + R HI + + + R+ I +
Sbjct: 497 NQELPPFCFGEIKP-AEAVRDLGVVIDKHLSLRRHINLVCRRASFALRRIGGIRHLLNQK 555
Query: 520 SAHVASIHIDILQVLQSCFRRLAVGAP 440
+ + IH + +L +C L G P
Sbjct: 556 TTEIL-IHAFVTSLLDNC-NSLLFGIP 580
>UniRef50_Q191B5 Cluster: UDP-glucose/GDP-mannose dehydrogenase
precursor; n=2; Desulfitobacterium hafniense|Rep:
UDP-glucose/GDP-mannose dehydrogenase precursor -
Desulfitobacterium hafniense (strain DCB-2)
Length = 441
Score = 33.1 bits (72), Expect = 7.9
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 21 VGQARAQPGGVGFANSCLSASERDLIVQGQM 113
+GQA +PG VGF SCL+ + LI QG++
Sbjct: 243 IGQAYLKPG-VGFGGSCLAKDTQGLIAQGEV 272
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 786,961,736
Number of Sequences: 1657284
Number of extensions: 15676434
Number of successful extensions: 37901
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 36353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37886
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65027411410
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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