Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30427
         (775 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0042 - 7672565-7672729,7672902-7672977,7673409-7674132,767...    29   3.1  
08_02_1034 + 23823194-23823307,23823399-23823620,23823984-238243...    29   4.1  
02_04_0276 + 21491150-21492761,21492891-21492947,21493817-214938...    29   4.1  
04_04_0284 + 24133397-24133483,24133843-24133979,24134311-241345...    28   9.5  

>11_02_0042 - 7672565-7672729,7672902-7672977,7673409-7674132,
            7674684-7674708,7675041-7675486,7676643-7676862,
            7677609-7678459,7678697-7679555
          Length = 1121

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = -3

Query: 614  H*IPPTHKV-PSEQ-DDVLQNSLITYNDIRKCGVRSRGQHPHRHPASPSILFS 462
            H +P T  V PS Q D  L N L + N I   G+R  GQ  + +  SPS+L S
Sbjct: 979  HRMPETDTVFPSRQVDKELSNGLKSLN-IGSHGLRQNGQMENGYAISPSLLHS 1030


>08_02_1034 +
           23823194-23823307,23823399-23823620,23823984-23824309,
           23824648-23824777,23825145-23825441,23825550-23825815,
           23827835-23828333,23828902-23828993,23829571-23829735,
           23829817-23830204,23830275-23830393,23830494-23830524,
           23830675-23830880,23830970-23831014,23831120-23831201,
           23832210-23832398,23834499-23834602,23834669-23834759,
           23835097-23835225,23835425-23835556,23835779-23835949,
           23836143-23836171,23836214-23836301,23836313-23836391,
           23836666-23836844
          Length = 1390

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 611 NGFIQDDSQL-LDLPGQGFGLAEKVERGVRISVYLVLVD 724
           +GF  DD +L LD P +GF    +    +R   Y+++VD
Sbjct: 6   DGFSADDDELDLDSPTEGFSSIPEAIEDIRQGKYVIVVD 44


>02_04_0276 +
           21491150-21492761,21492891-21492947,21493817-21493870,
           21493994-21494022
          Length = 583

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -2

Query: 162 FLSGPRLRSVIRRIRETSALELLGLSRK 79
           F SG RLRS++RR     AL L+G +R+
Sbjct: 66  FSSGDRLRSLVRRGELDEALRLVGSARR 93


>04_04_0284 +
           24133397-24133483,24133843-24133979,24134311-24134599,
           24134723-24134829,24134905-24135052,24135260-24135458,
           24135545-24135785,24135888-24135984,24136413-24136492,
           24136533-24136551
          Length = 467

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 121 NSSNDGSESRPTEKLNERQTGPKP 192
           +SS+ GS SRPT    E+Q G KP
Sbjct: 215 DSSHGGSLSRPTSFNKEKQEGKKP 238


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,464,955
Number of Sequences: 37544
Number of extensions: 445231
Number of successful extensions: 1175
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1175
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)