Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30427
(775 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47851| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 0.093
SB_52988| Best HMM Match : RVT_1 (HMM E-Value=2.5) 28 0.10
SB_46049| Best HMM Match : SH2 (HMM E-Value=6.4) 26 0.22
SB_48446| Best HMM Match : Pkinase (HMM E-Value=1.2e-05) 25 0.50
SB_16546| Best HMM Match : SH2 (HMM E-Value=6.4) 25 0.53
SB_29609| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_43796| Best HMM Match : SH2 (HMM E-Value=6.4) 25 1.1
SB_30009| Best HMM Match : RVT_1 (HMM E-Value=1.2e-18) 31 1.4
SB_47163| Best HMM Match : SH2 (HMM E-Value=6.4) 31 1.4
SB_24694| Best HMM Match : RVT_1 (HMM E-Value=0.99) 31 1.4
SB_22968| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_9149| Best HMM Match : Lipase_GDSL (HMM E-Value=0.51) 30 1.8
SB_35188| Best HMM Match : RVT_1 (HMM E-Value=2.3e-25) 30 2.4
SB_26687| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_25444| Best HMM Match : SH2 (HMM E-Value=6.4) 30 2.4
SB_9316| Best HMM Match : SH2 (HMM E-Value=6.4) 30 2.4
SB_7414| Best HMM Match : SH2 (HMM E-Value=6.4) 30 2.4
SB_35551| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_59383| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_15441| Best HMM Match : RVT_1 (HMM E-Value=1e-19) 29 4.2
SB_5331| Best HMM Match : Fork_head (HMM E-Value=0) 29 4.2
SB_6094| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_27847| Best HMM Match : zf-ZPR1 (HMM E-Value=2.1) 29 5.5
SB_40488| Best HMM Match : HEAT (HMM E-Value=6.3e-08) 28 7.3
SB_11072| Best HMM Match : SH2 (HMM E-Value=6.4) 28 7.3
SB_3085| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_29974| Best HMM Match : RVT_1 (HMM E-Value=3e-17) 28 7.3
SB_11195| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_10516| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_6463| Best HMM Match : RVT_1 (HMM E-Value=2.2e-13) 28 7.3
>SB_47851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 893
Score = 27.9 bits (59), Expect(2) = 0.093
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPW 437
SL+ +T Y + + PI+ Y ++V HID + Q R+ + W
Sbjct: 832 SLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCARVILDNKW 882
Score = 25.4 bits (53), Expect(2) = 0.093
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 646 VK*LGVVLDKSIKFRPHIKSLRNK 575
VK LG+ LD S+ + H+K + NK
Sbjct: 793 VKLLGIRLDNSLTWDNHLKYIHNK 816
>SB_52988| Best HMM Match : RVT_1 (HMM E-Value=2.5)
Length = 277
Score = 27.9 bits (59), Expect(2) = 0.10
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPW 437
SL+ +T Y + PI+ Y ++V HID + Q R+ + W
Sbjct: 216 SLKARTLFYHALIQPILDYGAIVWGSTKKQHIDDMVKFQKRCARVILDKKW 266
Score = 25.4 bits (53), Expect(2) = 0.10
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 646 VK*LGVVLDKSIKFRPHIKSLRNK 575
VK LG+ LD S+ + H+K + NK
Sbjct: 177 VKLLGIRLDNSLTWDNHLKYIHNK 200
>SB_46049| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 252
Score = 26.2 bits (55), Expect(2) = 0.22
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 646 VK*LGVVLDKSIKFRPHIKSLRNK 575
VK LG+ LD S+ + H+K + NK
Sbjct: 42 VKLLGIRLDNSLTWNNHLKYIHNK 65
Score = 25.8 bits (54), Expect(2) = 0.22
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHI-DILQVLQSCFRRL 455
SL+ +T Y + + PI+ Y ++V HI D+++ + C R +
Sbjct: 81 SLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCARAM 126
>SB_48446| Best HMM Match : Pkinase (HMM E-Value=1.2e-05)
Length = 228
Score = 25.4 bits (53), Expect(2) = 0.50
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 646 VK*LGVVLDKSIKFRPHIKSLRNK 575
VK LG+ LD S+ + H+K + NK
Sbjct: 146 VKLLGIRLDNSLTWDNHLKYIHNK 169
Score = 25.4 bits (53), Expect(2) = 0.50
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHI-DILQVLQSCFR 461
SL+ +T Y + + PI+ Y ++V HI D+++ + C R
Sbjct: 185 SLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCAR 228
>SB_16546| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 124
Score = 25.4 bits (53), Expect(2) = 0.53
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 646 VK*LGVVLDKSIKFRPHIKSLRNK 575
VK LG+ LD S+ + H+K + NK
Sbjct: 42 VKLLGIRLDNSLTWDNHLKYIHNK 65
Score = 25.4 bits (53), Expect(2) = 0.53
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHI-DILQVLQSCFR 461
SL+ +T Y + + PI+ Y ++V HI D+++ + C R
Sbjct: 81 SLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCAR 124
>SB_29609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 31.5 bits (68), Expect = 0.78
Identities = 18/79 (22%), Positives = 35/79 (44%)
Frame = -1
Query: 613 IKFRPHIKSLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWF 434
+K + SL+ +T Y + + PI+ Y ++V HID + Q R+ + W
Sbjct: 63 LKRKKKFLSLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCARVILDKKWD 122
Query: 433 VRNVDLHDDLVLESITKHL 377
+ L ++L + K +
Sbjct: 123 APSKPLFEELNIVPFDKRI 141
>SB_43796| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 352
Score = 25.4 bits (53), Expect(2) = 1.1
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHI-DILQVLQSCFR 461
SL+ +T Y + + PI+ Y ++V HI D+++ + C R
Sbjct: 303 SLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCAR 346
Score = 24.2 bits (50), Expect(2) = 1.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 646 VK*LGVVLDKSIKFRPHIKSLRNK 575
VK LG+ LD ++ + H+K + NK
Sbjct: 264 VKLLGIRLDNTLTWDNHLKYIHNK 287
>SB_30009| Best HMM Match : RVT_1 (HMM E-Value=1.2e-18)
Length = 552
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWFVRNVDLHD 410
SL+ +T Y + + PI+ Y ++V HID + Q R+ + W + L +
Sbjct: 418 SLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCARVILDKKWDAPSKPLFE 477
Query: 409 DLVLESITKHL 377
+L + K +
Sbjct: 478 ELNIVPFDKRI 488
>SB_47163| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 172
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWFVRNVDLHD 410
SL+ +T Y + + PI+ Y ++V HID + Q R+ + W + L +
Sbjct: 81 SLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCARVILDKKWDAPSKPLFE 140
Query: 409 DLVLESITKHL 377
+L + K +
Sbjct: 141 ELNIVPFDKRI 151
>SB_24694| Best HMM Match : RVT_1 (HMM E-Value=0.99)
Length = 309
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWFVRNVDLHD 410
SL+ +T Y + + PI+ Y ++V HID + Q R+ + W + L +
Sbjct: 216 SLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCARVILDKKWDAPSKPLFE 275
Query: 409 DLVLESITKHL 377
+L + K +
Sbjct: 276 ELNIVPFDKRI 286
>SB_22968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1332
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/66 (30%), Positives = 29/66 (43%)
Frame = -1
Query: 637 LGVVLDKSIKFRPHIKSLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRR 458
LGV+LDK + F H+K++ + + + I Y S + IH I L C
Sbjct: 879 LGVILDKYLSFEDHLKTVCKSASFHLRNIGKIRKYLEKNSTEIL-IHAFISSKLDYC-NS 936
Query: 457 LAVGAP 440
L G P
Sbjct: 937 LLYGLP 942
>SB_9149| Best HMM Match : Lipase_GDSL (HMM E-Value=0.51)
Length = 604
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/71 (23%), Positives = 31/71 (43%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWFVRNVDLHD 410
SL+ +T Y + + PI+ Y ++V HID + Q R+ + W L +
Sbjct: 445 SLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKQCARVIIDKKWDAPAKPLFE 504
Query: 409 DLVLESITKHL 377
+L + K +
Sbjct: 505 ELNIVPFDKRI 515
>SB_35188| Best HMM Match : RVT_1 (HMM E-Value=2.3e-25)
Length = 467
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = -1
Query: 637 LGVVLDKSIKFRPHIKSLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRR 458
LGV+LDK + F H+K++ + + I Y S + IH I L C
Sbjct: 266 LGVILDKYLSFEDHLKTVCKSARFHPRNIGKIRKYLDKNSTEIL-IHAFISSKLDYC-NS 323
Query: 457 LAVGAP 440
L G P
Sbjct: 324 LLYGLP 329
>SB_26687| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 614
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = -1
Query: 637 LGVVLDKSIKFRPHIKSLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRR 458
LGV+LDK + F H+K++ + + I Y S + IH I L C
Sbjct: 465 LGVILDKCLSFEDHLKTVCKSARFHLRNIGKIRKYLDKNSTEIL-IHAFISSKLDYC-NS 522
Query: 457 LAVGAP 440
L G P
Sbjct: 523 LLYGLP 528
>SB_25444| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 252
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWFVRNVDLHD 410
SL+ +T Y + + PI+ Y ++V HID + Q R+ + W + L +
Sbjct: 118 SLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCARVILDKKWDAPSKPLFE 177
Query: 409 DL 404
+L
Sbjct: 178 EL 179
>SB_9316| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 169
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWFVRNVDLHD 410
SL+ +T Y + + PI+ Y ++V HID + Q R+ + W + L +
Sbjct: 81 SLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKGCARVILDKKWNAPSKPLLE 140
Query: 409 DLVLESITKHL 377
+L + K +
Sbjct: 141 ELNIVPFDKRI 151
>SB_7414| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 323
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWFVRNVDLHD 410
SL+ +T Y + + PI+ Y ++V HID + Q R+ + W + L +
Sbjct: 195 SLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCARVILDKKWDSPSKPLFE 254
Query: 409 DLVLESITKHL 377
+L + K +
Sbjct: 255 ELNIVPFDKRI 265
>SB_35551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/71 (22%), Positives = 32/71 (45%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWFVRNVDLHD 410
SL+ +T Y + + PI+ Y ++V HID + + R+ + W + L +
Sbjct: 213 SLKARTLFYHSLIQPILDYGAIVWGLTKKQHIDYMVKFEKRCARVILDKKWDAPSKPLFE 272
Query: 409 DLVLESITKHL 377
+L + K +
Sbjct: 273 ELNIVPFDKRI 283
>SB_59383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 709
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = -1
Query: 637 LGVVLDKSIKFRPHIKSL---RNKTTCYKTRL*PIMTYASVVSAHVASIHIDIL 485
LGVV D + + PH++ L N R+ P +T A + + A IH L
Sbjct: 641 LGVVFDNHLTWEPHVEHLCKKINSRISLLRRIAPFLTPAGAIHYYNACIHSQFL 694
>SB_15441| Best HMM Match : RVT_1 (HMM E-Value=1e-19)
Length = 674
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -1
Query: 637 LGVVLDKSIKFRPHIKSL---RNKTTCYKTRL*PIMTYASVVSAHVASIH 497
LGVV D + + PH+ L N R+ P +T A+ + + A IH
Sbjct: 423 LGVVFDNQLTWEPHVVQLCKKINSRISLLRRIAPFLTQAAAIHYYNACIH 472
>SB_5331| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 503
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = -1
Query: 637 LGVVLDKSIKFRPHI----KSLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDIL 485
LGVV D + + PH+ K + ++ + + R+ P +T A + + A IH +L
Sbjct: 295 LGVVFDNHLTWEPHVEQPCKKINSRISLLR-RIAPFLTPAGAIHYYNACIHTGVL 348
>SB_6094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 118 ANSSNDGSESRPTEKLNERQTGPKPTPSARA 210
A++SND + S +E R + P+P P ARA
Sbjct: 36 AHNSNDSTVSDSSEDYTPRVSRPRPQPRARA 66
>SB_27847| Best HMM Match : zf-ZPR1 (HMM E-Value=2.1)
Length = 149
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = -1
Query: 484 QVLQSCFRRLAVGAPWFVRNVDLHDDLVLESITKHLKSASERYFDKATHYDNHCRR*LLL 305
+VL+ C+ + VG F+R +LH + E+ + + S + Y L L
Sbjct: 13 EVLEKCWHDVEVGEAVFIRRFELHYNQDFETKLLNNNAKSNSSVKVNSQYSERDIAKLKL 72
Query: 304 DSVSHRSQL 278
SV HR+QL
Sbjct: 73 -SVGHRAQL 80
>SB_40488| Best HMM Match : HEAT (HMM E-Value=6.3e-08)
Length = 1185
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 518 RSRGQHPHRHPASPSIL--FS*VSCRSTVVREKRRSTRRSGP*INNKTPEVSVRTV 357
+S H H S IL S V + TV ++K+R+ +R +NKTP ++ +
Sbjct: 204 KSSTSHSCSHAVSGCILPAVSFVCIKGTVKKKKKRNAQRKDKGYSNKTPATTLAPI 259
>SB_11072| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 228
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPW 437
SL+ +T Y + + PI+ Y ++V HID + Q R+ + W
Sbjct: 169 SLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCARVILDKKW 219
>SB_3085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -1
Query: 637 LGVVLDKSIKFRPHIKSL---RNKTTCYKTRL*PIMTYASVVSAHVASIH 497
LGVV D + + PH++ L N R+ P +T A + + A IH
Sbjct: 82 LGVVFDNHLTWEPHVEHLCKKINSRISLLRRIAPFLTPAGAIHHYNACIH 131
>SB_29974| Best HMM Match : RVT_1 (HMM E-Value=3e-17)
Length = 890
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = -1
Query: 412 DDLVLESITKHLKSASERYFDKATH 338
DDLV++++ KH +S S++Y+D +H
Sbjct: 745 DDLVVKTL-KHRQSVSKKYYDSHSH 768
>SB_11195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 596
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -1
Query: 637 LGVVLDKSIKFRPHIKSL---RNKTTCYKTRL*PIMTYASVVSAHVASIH 497
LGVV D + + PH++ L N R+ P +T A + + A IH
Sbjct: 82 LGVVFDNHLTWEPHVEHLCKKINSRISLLRRIAPFLTPAGAIHYYNACIH 131
>SB_10516| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -1
Query: 637 LGVVLDKSIKFRPHIKSL---RNKTTCYKTRL*PIMTYASVVSAHVASIH 497
LGVV D + + PH++ L N R+ P +T A + + A IH
Sbjct: 183 LGVVFDNHLTWEPHVEHLCKKINSRISLLRRIAPFLTPAGAIHYYNACIH 232
>SB_6463| Best HMM Match : RVT_1 (HMM E-Value=2.2e-13)
Length = 675
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPW 437
SL+ +T Y + + PI+ Y ++V HID + Q R+ + W
Sbjct: 614 SLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCARVILDKKW 664
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,609,626
Number of Sequences: 59808
Number of extensions: 514471
Number of successful extensions: 1416
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1414
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2107953584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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