Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30427
(775 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 66 7e-11
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 66 7e-11
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 61 2e-09
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 58 1e-08
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 51 2e-06
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 51 2e-06
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 45 1e-04
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 39 0.007
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 39 0.007
AY075556-1|AAL68363.1| 113|Drosophila melanogaster RH61745p pro... 30 3.1
AE014298-2540|AAF48710.2| 113|Drosophila melanogaster CG12998-P... 30 3.1
AY095038-1|AAM11366.1| 819|Drosophila melanogaster LD28013p pro... 29 7.1
AE014297-4823|AAF57207.1| 1844|Drosophila melanogaster CG1976-PA... 29 7.1
AE014298-1529|AAF47983.2| 2602|Drosophila melanogaster CG2174-PA... 29 9.4
AE014298-1528|ABI30975.1| 2693|Drosophila melanogaster CG2174-PB... 29 9.4
AE014134-2469|AAS64704.1| 1853|Drosophila melanogaster CG32972-P... 29 9.4
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 65.7 bits (153), Expect = 7e-11
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWFVRNVDLHD 410
SL K Y + L PI TY S + + + +IDI+Q QS R+ GAPW++RN ++H
Sbjct: 778 SLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHR 837
Query: 409 DLVLESITKHLKSASERYFDKATHYDNHCRR*LL---LDSVSHRSQLPS 272
DL ++ + + + +Y +K T + N R L+ S HR+ LP+
Sbjct: 838 DLKIKLVIEVIAEKKTKYNEKLTTHTNPLARKLIRVCSQSRLHRNDLPA 886
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 65.7 bits (153), Expect = 7e-11
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWFVRNVDLHD 410
SL K Y + L PI TY S + + + +IDI+Q QS R+ GAPW++RN ++H
Sbjct: 778 SLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHR 837
Query: 409 DLVLESITKHLKSASERYFDKATHYDNHCRR*LL---LDSVSHRSQLPS 272
DL ++ + + + +Y +K T + N R L+ S HR+ LP+
Sbjct: 838 DLKIKLVIEVIAEKKTKYNEKLTTHTNPLARKLIRVCSQSRLHRNDLPA 886
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 60.9 bits (141), Expect = 2e-09
Identities = 32/87 (36%), Positives = 41/87 (47%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWFVRNVDLHD 410
SL NK T YK L P Y + HI +Q +Q+ RL G WFVRN LH
Sbjct: 787 SLSNKLTIYKQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCEWFVRNTTLHR 846
Query: 409 DLVLESITKHLKSASERYFDKATHYDN 329
DL L ++ + S RY D+ + N
Sbjct: 847 DLKLATVFDEINKHSSRYHDRLERHRN 873
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 58.4 bits (135), Expect = 1e-08
Identities = 29/78 (37%), Positives = 45/78 (57%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWFVRNVDLHD 410
SL +K Y + L PI TY S + + ++ +IDI+Q QS R GAPW+VR+ ++
Sbjct: 780 SLDHKVLLYNSILKPIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGAPWYVRSENIQR 839
Query: 409 DLVLESITKHLKSASERY 356
DL + S+T + E+Y
Sbjct: 840 DLNIPSVTNAITELKEKY 857
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 50.8 bits (116), Expect = 2e-06
Identities = 26/91 (28%), Positives = 47/91 (51%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWFVRNVDLHD 410
SL K YK+ L P + Y V A H++ +++LQ+ R GAPW++R D+
Sbjct: 792 SLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIER 851
Query: 409 DLVLESITKHLKSASERYFDKATHYDNHCRR 317
DL + + L++ +++Y ++ + N R
Sbjct: 852 DLKVPKLGDKLQNIAQKYMERLNVHPNSLAR 882
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 50.8 bits (116), Expect = 2e-06
Identities = 26/91 (28%), Positives = 47/91 (51%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWFVRNVDLHD 410
SL K YK+ L P + Y V A H++ +++LQ+ R GAPW++R D+
Sbjct: 594 SLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIER 653
Query: 409 DLVLESITKHLKSASERYFDKATHYDNHCRR 317
DL + + L++ +++Y ++ + N R
Sbjct: 654 DLKVPKLGDKLQNIAQKYLERLNVHPNSLAR 684
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 45.2 bits (102), Expect = 1e-04
Identities = 28/99 (28%), Positives = 45/99 (45%)
Frame = -1
Query: 604 RPHIKSLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWFVRN 425
R +LR K Y + PI Y + A + + +QVLQ+ R P++VR
Sbjct: 788 RKSTMTLRAKRAVYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYYVRG 847
Query: 424 VDLHDDLVLESITKHLKSASERYFDKATHYDNHCRR*LL 308
LH DL L ++ + + + RY D+ + + R LL
Sbjct: 848 TTLHRDLNLHTVEEQISRHTSRYSDRLRRHHSILARRLL 886
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 39.1 bits (87), Expect = 0.007
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWFVRNVDLH 413
S+ NK +KT PI+ Y S V A HI LQ+ Q+ +L + P++ LH
Sbjct: 812 SISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLH 870
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 39.1 bits (87), Expect = 0.007
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = -1
Query: 589 SLRNKTTCYKTRL*PIMTYASVVSAHVASIHIDILQVLQSCFRRLAVGAPWFVRNVDLH 413
S+ NK +KT PI+ Y S V A HI LQ+ Q+ +L + P++ LH
Sbjct: 760 SISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLH 818
>AY075556-1|AAL68363.1| 113|Drosophila melanogaster RH61745p
protein.
Length = 113
Score = 30.3 bits (65), Expect = 3.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 663 NPWPGKSSSWESSWI 619
NPW G SS W S W+
Sbjct: 27 NPWGGSSSGWNSGWV 41
>AE014298-2540|AAF48710.2| 113|Drosophila melanogaster CG12998-PA
protein.
Length = 113
Score = 30.3 bits (65), Expect = 3.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 663 NPWPGKSSSWESSWI 619
NPW G SS W S W+
Sbjct: 27 NPWGGSSSGWNSGWV 41
>AY095038-1|AAM11366.1| 819|Drosophila melanogaster LD28013p
protein.
Length = 819
Score = 29.1 bits (62), Expect = 7.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 274 TVTGSCVKQSQGVVSGGNDYHNVWPYR 354
T T S V S+ +GGN+YH + YR
Sbjct: 732 TSTSSTVSSSRPFANGGNNYHTLGTYR 758
>AE014297-4823|AAF57207.1| 1844|Drosophila melanogaster CG1976-PA
protein.
Length = 1844
Score = 29.1 bits (62), Expect = 7.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 274 TVTGSCVKQSQGVVSGGNDYHNVWPYR 354
T T S V S+ +GGN+YH + YR
Sbjct: 1757 TSTSSTVSSSRPFANGGNNYHTLGTYR 1783
>AE014298-1529|AAF47983.2| 2602|Drosophila melanogaster CG2174-PA,
isoform A protein.
Length = 2602
Score = 28.7 bits (61), Expect = 9.4
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 569 RRLVPKGLYVWAEFNGFIQD--DSQLLDLPGQGFGLAEKVERGVRISVYL 712
R P LYV FN D + LL+LPG G + E V RI+ L
Sbjct: 2369 REPAPMPLYVEVLFNQVAPDYLEGLLLELPGNGVPVPEMVRDMARIAALL 2418
>AE014298-1528|ABI30975.1| 2693|Drosophila melanogaster CG2174-PB,
isoform B protein.
Length = 2693
Score = 28.7 bits (61), Expect = 9.4
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 569 RRLVPKGLYVWAEFNGFIQD--DSQLLDLPGQGFGLAEKVERGVRISVYL 712
R P LYV FN D + LL+LPG G + E V RI+ L
Sbjct: 2460 REPAPMPLYVEVLFNQVAPDYLEGLLLELPGNGVPVPEMVRDMARIAALL 2509
>AE014134-2469|AAS64704.1| 1853|Drosophila melanogaster CG32972-PA,
isoform A protein.
Length = 1853
Score = 28.7 bits (61), Expect = 9.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 92 VSLGSTQTTISKSYPSWLSPCLPNCPGETE 3
+S+ +TQTT ++ P + P LP C TE
Sbjct: 1232 ISISTTQTTTTELIPCIIFPSLPLCAQSTE 1261
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,275,599
Number of Sequences: 53049
Number of extensions: 730775
Number of successful extensions: 1972
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1972
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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